RNA–Protein interactions for RNA: ENST00000378549.5

ITM2B-201, Transcript of integral membrane protein 2B, humanhuman

TSL 5 BASIC

Gene ITM2B, Length 805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-201ENST00000378549 CDC42BPGQ6DT37 1551 aa24.59■■□□□ 1.53
ITM2B-201ENST00000378549 PLEKHH1Q9ULM0 1364 aa24.58■■□□□ 1.53
ITM2B-201ENST00000378549 PRAM1Q96QH2 718 aa24.58■■□□□ 1.53
ITM2B-201ENST00000378549 ATF3P18847 181 aa24.57■■□□□ 1.52
ITM2B-201ENST00000378549 QRICH2Q9H0J4 1663 aa24.56■■□□□ 1.52
ITM2B-201ENST00000378549 GPRASP1Q5JY77 1395 aa24.56■■□□□ 1.52
ITM2B-201ENST00000378549 CADPS2Q86UW7 1296 aa24.56■■□□□ 1.52
ITM2B-201ENST00000378549 SAFB2Q14151 953 aaKnown RBP eCLIP24.54■■□□□ 1.52
ITM2B-201ENST00000378549 ADGRB2O60241 1585 aa24.54■■□□□ 1.52
ITM2B-201ENST00000378549 SCAF1Q9H7N4 1312 aaKnown RBP24.53■■□□□ 1.52
ITM2B-201ENST00000378549 EIF3AQ14152 1382 aaKnown RBP24.53■■□□□ 1.52
ITM2B-201ENST00000378549 FMN2Q9NZ56 1722 aa24.52■■□□□ 1.52
ITM2B-201ENST00000378549 CARD11Q9BXL7 1154 aa24.52■■□□□ 1.52
ITM2B-201ENST00000378549 ROBO1Q9Y6N7 1651 aa24.51■■□□□ 1.51
ITM2B-201ENST00000378549 PIP4K2BP78356 416 aa24.51■■□□□ 1.51
ITM2B-201ENST00000378549 MST1RQ04912 1400 aa24.48■■□□□ 1.51
ITM2B-201ENST00000378549 RGPD8O14715 1765 aaPredicted RBP24.47■■□□□ 1.51
ITM2B-201ENST00000378549 CENPJQ9HC77 1338 aaPredicted RBP24.47■■□□□ 1.51
ITM2B-201ENST00000378549 SLAIN2Q9P270 581 aa24.47■■□□□ 1.51
ITM2B-201ENST00000378549 MINK1Q8N4C8 1332 aaPredicted RBP24.46■■□□□ 1.51
ITM2B-201ENST00000378549 HIRIP3Q9BW71 556 aaPredicted RBP24.43■■□□□ 1.5
ITM2B-201ENST00000378549 ITSN1Q15811 1721 aa24.42■■□□□ 1.5
ITM2B-201ENST00000378549 C1orf167Q5SNV9 1468 aa24.42■■□□□ 1.5
ITM2B-201ENST00000378549 ILDR1Q86SU0 546 aaPredicted RBP24.39■■□□□ 1.49
ITM2B-201ENST00000378549 TULP4Q9NRJ4 1543 aa24.39■■□□□ 1.49
ITM2B-201ENST00000378549 USP32Q8NFA0 1604 aa24.39■■□□□ 1.49
ITM2B-201ENST00000378549 PHLPP1O60346 1717 aa24.38■■□□□ 1.49
ITM2B-201ENST00000378549 KIF1AQ12756 1690 aa24.38■■□□□ 1.49
ITM2B-201ENST00000378549 NHSL1Q5SYE7 1610 aa24.37■■□□□ 1.49
ITM2B-201ENST00000378549 USP47Q96K76 1375 aa24.37■■□□□ 1.49
ITM2B-201ENST00000378549 ANKARQ7Z5J8 1434 aa24.36■■□□□ 1.49
ITM2B-201ENST00000378549 NUTM2FA1L443 756 aa24.36■■□□□ 1.49
ITM2B-201ENST00000378549 WASLO00401 505 aaPredicted RBP24.36■■□□□ 1.49
ITM2B-201ENST00000378549 SBNO2Q9Y2G9 1366 aa24.34■■□□□ 1.49
ITM2B-201ENST00000378549 BRINP3Q76B58 766 aa24.34■■□□□ 1.49
ITM2B-201ENST00000378549 AHDC1Q5TGY3 1603 aaPredicted RBP24.34■■□□□ 1.49
ITM2B-201ENST00000378549 TOPAZ1Q8N9V7 1692 aa24.33■■□□□ 1.49
ITM2B-201ENST00000378549 ESCO1Q5FWF5 840 aa24.32■■□□□ 1.48
ITM2B-201ENST00000378549 CDK19Q9BWU1 502 aa24.31■■□□□ 1.48
ITM2B-201ENST00000378549 ATP7BP35670 1465 aa24.31■■□□□ 1.48
ITM2B-201ENST00000378549 ORAI2Q96SN7 254 aa24.3■■□□□ 1.48
ITM2B-201ENST00000378549 EVC2Q86UK5 1308 aa24.3■■□□□ 1.48
ITM2B-201ENST00000378549 ST20-MTHFSA0A0A6YYL1 179 aa24.29■■□□□ 1.48
ITM2B-201ENST00000378549 HSPA1LP34931 641 aa24.28■■□□□ 1.48
ITM2B-201ENST00000378549 SRPK2P78362 688 aaKnown RBP24.28■■□□□ 1.48
ITM2B-201ENST00000378549 COL16A1Q07092 1604 aaPredicted RBP24.28■■□□□ 1.48
ITM2B-201ENST00000378549 PRR36Q9H6K5 1346 aa24.26■■□□□ 1.47
ITM2B-201ENST00000378549 SLC24A1O60721 1099 aa24.25■■□□□ 1.47
ITM2B-201ENST00000378549 NUDT16Q96DE0 195 aaKnown RBP24.24■■□□□ 1.47
ITM2B-201ENST00000378549 PHF8Q9UPP1 1060 aa24.24■■□□□ 1.47
ITM2B-201ENST00000378549 EIF4G2P78344 907 aaKnown RBP eCLIP24.23■■□□□ 1.47
ITM2B-201ENST00000378549 CABP2Q9NPB3 220 aa24.23■■□□□ 1.47
ITM2B-201ENST00000378549 NPHP3Q7Z494 1330 aa24.23■■□□□ 1.47
ITM2B-201ENST00000378549 TESK2Q96S53 571 aa24.21■■□□□ 1.47
ITM2B-201ENST00000378549 CCDC61Q9Y6R9 512 aa24.2■■□□□ 1.46
ITM2B-201ENST00000378549 PPIP5K1Q6PFW1 1433 aa24.19■■□□□ 1.46
ITM2B-201ENST00000378549 ATAD2Q6PL18 1390 aa24.19■■□□□ 1.46
ITM2B-201ENST00000378549 FOXO3O43524 673 aa24.19■■□□□ 1.46
ITM2B-201ENST00000378549 DDX17Q92841 729 aaKnown RBP24.19■■□□□ 1.46
ITM2B-201ENST00000378549 SHPRHQ149N8 1683 aa24.18■■□□□ 1.46
ITM2B-201ENST00000378549 PMFBP1Q8TBY8 1022 aa24.18■■□□□ 1.46
ITM2B-201ENST00000378549 PXDNQ92626 1479 aa24.18■■□□□ 1.46
ITM2B-201ENST00000378549 TMF1P82094 1093 aa24.17■■□□□ 1.46
ITM2B-201ENST00000378549 HSPA5P11021 654 aaKnown RBP24.16■■□□□ 1.46
ITM2B-201ENST00000378549 AKAP12Q02952 1782 aa24.16■■□□□ 1.46
ITM2B-201ENST00000378549 SOS2Q07890 1332 aaPredicted RBP24.15■■□□□ 1.46
ITM2B-201ENST00000378549 NGDNQ8NEJ9 315 aaKnown RBP24.15■■□□□ 1.46
ITM2B-201ENST00000378549 DISP3Q9P2K9 1392 aa24.15■■□□□ 1.46
ITM2B-201ENST00000378549 TRPM3Q9HCF6 1732 aaPredicted RBP24.14■■□□□ 1.45
ITM2B-201ENST00000378549 ZEB1P37275 1124 aaPredicted RBP24.13■■□□□ 1.45
ITM2B-201ENST00000378549 XPCQ01831 940 aaPredicted RBP24.13■■□□□ 1.45
ITM2B-201ENST00000378549 PSME1Q06323 249 aa24.13■■□□□ 1.45
ITM2B-201ENST00000378549 CDCA8Q53HL2 280 aa24.12■■□□□ 1.45
ITM2B-201ENST00000378549 LRRC59Q96AG4 307 aaKnown RBP24.12■■□□□ 1.45
ITM2B-201ENST00000378549 PUS7Q96PZ0 661 aaKnown RBP24.12■■□□□ 1.45
ITM2B-201ENST00000378549 JCADQ9P266 1359 aa24.12■■□□□ 1.45
ITM2B-201ENST00000378549 PLEKHG3A1L390 1219 aa24.11■■□□□ 1.45
ITM2B-201ENST00000378549 POLR3AO14802 1390 aaPredicted RBP24.11■■□□□ 1.45
ITM2B-201ENST00000378549 KRT28Q7Z3Y7 464 aa24.1■■□□□ 1.45
ITM2B-201ENST00000378549 CABP1Q9NZU7 370 aa24.1■■□□□ 1.45
ITM2B-201ENST00000378549 MON2Q7Z3U7 1717 aa24.1■■□□□ 1.45
ITM2B-201ENST00000378549 ACEP12821 1306 aa24.1■■□□□ 1.45
ITM2B-201ENST00000378549 ALS2Q96Q42 1657 aa24.08■■□□□ 1.44
ITM2B-201ENST00000378549 COL22A1Q8NFW1 1626 aaPredicted RBP24.07■■□□□ 1.44
ITM2B-201ENST00000378549 NINLQ9Y2I6 1382 aa24.07■■□□□ 1.44
ITM2B-201ENST00000378549 MYOM1P52179 1685 aa24.07■■□□□ 1.44
ITM2B-201ENST00000378549 TNS3Q68CZ2 1445 aa24.07■■□□□ 1.44
ITM2B-201ENST00000378549 SBNO1A3KN83 1393 aa24.06■■□□□ 1.44
ITM2B-201ENST00000378549 TMC1Q8TDI8 760 aa24.06■■□□□ 1.44
ITM2B-201ENST00000378549 PNPLA6Q8IY17 1366 aa24.04■■□□□ 1.44
ITM2B-201ENST00000378549 SPATA31A3Q5VYP0 1347 aa24.04■■□□□ 1.44
ITM2B-201ENST00000378549 NRKQ7Z2Y5 1582 aa24.03■■□□□ 1.44
ITM2B-201ENST00000378549 USP6P35125 1406 aa24.02■■□□□ 1.44
ITM2B-201ENST00000378549 ARHGEF10O15013 1369 aa24.02■■□□□ 1.44
ITM2B-201ENST00000378549 PAK3O75914 559 aaPredicted RBP24.01■■□□□ 1.43
ITM2B-201ENST00000378549 SPATA31A6Q5VVP1 1343 aa24.01■■□□□ 1.43
ITM2B-201ENST00000378549 BRD4O60885 1362 aaPredicted RBP24.01■■□□□ 1.43
ITM2B-201ENST00000378549 ABCA3Q99758 1704 aa24.01■■□□□ 1.43
ITM2B-201ENST00000378549 CPSF1Q10570 1443 aaKnown RBP24.01■■□□□ 1.43
ITM2B-201ENST00000378549 LMOD2Q6P5Q4 547 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms