RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 TERF1P54274 439 aa12.92□□□□□ -0.34
ARHGEF39-201ENST00000378387 DDX19BQ9UMR2 479 aa12.92□□□□□ -0.34
ARHGEF39-201ENST00000378387 KIF16BQ96L93 1317 aa12.92□□□□□ -0.34
ARHGEF39-201ENST00000378387 U2AF2P26368 475 aaKnown RBP eCLIP12.92□□□□□ -0.34
ARHGEF39-201ENST00000378387 USP25Q9UHP3 1055 aa12.92□□□□□ -0.34
ARHGEF39-201ENST00000378387 SYAP1Q96A49 352 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF39-201ENST00000378387 ST18O60284 1047 aa12.91□□□□□ -0.34
ARHGEF39-201ENST00000378387 DAPK1P53355 1430 aa12.91□□□□□ -0.34
ARHGEF39-201ENST00000378387 TSPY26PQ9H489 355 aa12.91□□□□□ -0.34
ARHGEF39-201ENST00000378387 GDPD2Q9HCC8 539 aa12.91□□□□□ -0.34
ARHGEF39-201ENST00000378387 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
ARHGEF39-201ENST00000378387 ZNF500O60304 480 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF39-201ENST00000378387 NPHP1O15259 732 aa12.9□□□□□ -0.34
ARHGEF39-201ENST00000378387 LETM1O95202 739 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF39-201ENST00000378387 PAXIP1Q6ZW49 1069 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF39-201ENST00000378387 BCORL1Q5H9F3 1711 aa12.9□□□□□ -0.34
ARHGEF39-201ENST00000378387 EXOSC9Q06265 439 aaKnown RBP12.9□□□□□ -0.35
ARHGEF39-201ENST00000378387 PKP1Q13835 747 aa12.9□□□□□ -0.35
ARHGEF39-201ENST00000378387 CASC1Q6TDU7 716 aa12.9□□□□□ -0.35
ARHGEF39-201ENST00000378387 GTPBP4Q9BZE4 634 aaKnown RBP12.9□□□□□ -0.35
ARHGEF39-201ENST00000378387 PLEKHH2Q8IVE3 1493 aa12.89□□□□□ -0.35
ARHGEF39-201ENST00000378387 ZSCAN20P17040 1043 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF39-201ENST00000378387 NOLC1Q14978 699 aaKnown RBP eCLIP12.89□□□□□ -0.35
ARHGEF39-201ENST00000378387 STAC3Q96MF2 364 aa12.89□□□□□ -0.35
ARHGEF39-201ENST00000378387 CHMP3Q9Y3E7 222 aa12.89□□□□□ -0.35
ARHGEF39-201ENST00000378387 CCDC144AA2RUR9 1427 aa12.89□□□□□ -0.35
ARHGEF39-201ENST00000378387 GTF2E1P29083 439 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF39-201ENST00000378387 CHD1LQ86WJ1 897 aa12.88□□□□□ -0.35
ARHGEF39-201ENST00000378387 NOB1Q9ULX3 412 aaKnown RBP12.88□□□□□ -0.35
ARHGEF39-201ENST00000378387 IPO8O15397 1037 aaKnown RBP12.88□□□□□ -0.35
ARHGEF39-201ENST00000378387 KIF20AO95235 890 aa12.88□□□□□ -0.35
ARHGEF39-201ENST00000378387 HS1BP3Q53T59 392 aa12.88□□□□□ -0.35
ARHGEF39-201ENST00000378387 CFAP43Q8NDM7 1665 aa12.88□□□□□ -0.35
ARHGEF39-201ENST00000378387 ABCC5O15440 1437 aa12.88□□□□□ -0.35
ARHGEF39-201ENST00000378387 ANKRD50Q9ULJ7 1429 aa12.88□□□□□ -0.35
ARHGEF39-201ENST00000378387 ATP2B3Q16720 1220 aa12.88□□□□□ -0.35
ARHGEF39-201ENST00000378387 RUNDC1Q96C34 613 aa12.88□□□□□ -0.35
ARHGEF39-201ENST00000378387 DIAPH3Q9NSV4 1193 aa12.88□□□□□ -0.35
ARHGEF39-201ENST00000378387 SNX21Q969T3 373 aa12.87□□□□□ -0.35
ARHGEF39-201ENST00000378387 SUPT6HQ7KZ85 1726 aaKnown RBP12.87□□□□□ -0.35
ARHGEF39-201ENST00000378387 ZMYM4Q5VZL5 1548 aa12.87□□□□□ -0.35
ARHGEF39-201ENST00000378387 BLMP54132 1417 aaPredicted RBP12.87□□□□□ -0.35
ARHGEF39-201ENST00000378387 AEBP2Q6ZN18 517 aaPredicted RBP12.87□□□□□ -0.35
ARHGEF39-201ENST00000378387 TMEM57Q8N5G2 664 aa12.87□□□□□ -0.35
ARHGEF39-201ENST00000378387 PLEKHD1A6NEE1 506 aa12.86□□□□□ -0.35
ARHGEF39-201ENST00000378387 TBC1D9Q6ZT07 1266 aa12.86□□□□□ -0.35
ARHGEF39-201ENST00000378387 ZGPATQ8N5A5 531 aaKnown RBP12.86□□□□□ -0.35
ARHGEF39-201ENST00000378387 MYRIPQ8NFW9 859 aa12.86□□□□□ -0.35
ARHGEF39-201ENST00000378387 MCM5P33992 734 aa12.86□□□□□ -0.35
ARHGEF39-201ENST00000378387 ERBINQ96RT1 1412 aa12.86□□□□□ -0.35
ARHGEF39-201ENST00000378387 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF39-201ENST00000378387 LRSAM1Q6UWE0 723 aa12.86□□□□□ -0.35
ARHGEF39-201ENST00000378387 CHMP7Q8WUX9 453 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF39-201ENST00000378387 TESK2Q96S53 571 aa12.86□□□□□ -0.35
ARHGEF39-201ENST00000378387 EFCAB5A4FU69 1503 aa12.85□□□□□ -0.35
ARHGEF39-201ENST00000378387 UTP14CQ5TAP6 766 aaKnown RBP12.85□□□□□ -0.35
ARHGEF39-201ENST00000378387 IFT57Q9NWB7 429 aa12.85□□□□□ -0.35
ARHGEF39-201ENST00000378387 NESP48681 1621 aa12.85□□□□□ -0.35
ARHGEF39-201ENST00000378387 EHBP1L1Q8N3D4 1523 aa12.85□□□□□ -0.35
ARHGEF39-201ENST00000378387 TRIM27P14373 513 aa12.85□□□□□ -0.35
ARHGEF39-201ENST00000378387 ZNF445P59923 1031 aa12.84□□□□□ -0.35
ARHGEF39-201ENST00000378387 TMEM63CQ9P1W3 806 aa12.84□□□□□ -0.35
ARHGEF39-201ENST00000378387 BCL2L12Q9HB09 334 aa12.84□□□□□ -0.35
ARHGEF39-201ENST00000378387 ZNF521Q96K83 1311 aa12.84□□□□□ -0.35
ARHGEF39-201ENST00000378387 POLA1P09884 1462 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF39-201ENST00000378387 CDC45O75419 566 aa12.84□□□□□ -0.35
ARHGEF39-201ENST00000378387 PHF14O94880 888 aa12.84□□□□□ -0.35
ARHGEF39-201ENST00000378387 NEK4P51957 841 aa12.84□□□□□ -0.35
ARHGEF39-201ENST00000378387 LMBRD1Q9NUN5 540 aa12.84□□□□□ -0.35
ARHGEF39-201ENST00000378387 CDK13Q14004 1512 aaKnown RBP12.84□□□□□ -0.35
ARHGEF39-201ENST00000378387 CERS3Q8IU89 383 aa12.83□□□□□ -0.35
ARHGEF39-201ENST00000378387 SSH1Q8WYL5 1049 aa12.83□□□□□ -0.35
ARHGEF39-201ENST00000378387 PRIMPOLQ96LW4 560 aa12.83□□□□□ -0.35
ARHGEF39-201ENST00000378387 RABEP1Q15276 862 aa12.83□□□□□ -0.36
ARHGEF39-201ENST00000378387 ATF7IPQ6VMQ6 1270 aa12.83□□□□□ -0.36
ARHGEF39-201ENST00000378387 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.83□□□□□ -0.36
ARHGEF39-201ENST00000378387 ADCY5O95622 1261 aa12.83□□□□□ -0.36
ARHGEF39-201ENST00000378387 MBD3O95983 291 aa12.83□□□□□ -0.36
ARHGEF39-201ENST00000378387 MTHFSP49914 203 aa12.83□□□□□ -0.36
ARHGEF39-201ENST00000378387 RBM25P49756 843 aaKnown RBP12.82□□□□□ -0.36
ARHGEF39-201ENST00000378387 HECW1Q76N89 1606 aa12.82□□□□□ -0.36
ARHGEF39-201ENST00000378387 NINLQ9Y2I6 1382 aa12.82□□□□□ -0.36
ARHGEF39-201ENST00000378387 CCDC66A2RUB6 948 aa12.81□□□□□ -0.36
ARHGEF39-201ENST00000378387 RALGAPBQ86X10 1494 aa12.81□□□□□ -0.36
ARHGEF39-201ENST00000378387 HCLS1P14317 486 aaPredicted RBP12.81□□□□□ -0.36
ARHGEF39-201ENST00000378387 SAFB2Q14151 953 aaKnown RBP eCLIP12.81□□□□□ -0.36
ARHGEF39-201ENST00000378387 ROCK1Q13464 1354 aa12.81□□□□□ -0.36
ARHGEF39-201ENST00000378387 TOPBP1Q92547 1522 aa12.81□□□□□ -0.36
ARHGEF39-201ENST00000378387 GPT2Q8TD30 523 aa12.81□□□□□ -0.36
ARHGEF39-201ENST00000378387 NSFL1CQ9UNZ2 370 aaKnown RBP12.81□□□□□ -0.36
ARHGEF39-201ENST00000378387 CCDC27Q2M243 656 aa12.8□□□□□ -0.36
ARHGEF39-201ENST00000378387 C16orf45Q96MC5 204 aaPredicted RBP12.8□□□□□ -0.36
ARHGEF39-201ENST00000378387 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.8□□□□□ -0.36
ARHGEF39-201ENST00000378387 TRMT2AQ8IZ69 625 aaKnown RBP12.8□□□□□ -0.36
ARHGEF39-201ENST00000378387 GOLGA6L6A8MZA4 724 aa12.8□□□□□ -0.36
ARHGEF39-201ENST00000378387 RIOK3O14730 519 aaKnown RBP12.8□□□□□ -0.36
ARHGEF39-201ENST00000378387 TAF3Q5VWG9 929 aa12.79□□□□□ -0.36
ARHGEF39-201ENST00000378387 NGEFQ8N5V2 710 aa12.79□□□□□ -0.36
ARHGEF39-201ENST00000378387 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.79□□□□□ -0.36
ARHGEF39-201ENST00000378387 V9GYY5 206 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms