RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 RAD21O60216 631 aa18■□□□□ 0.47
EXT1-201ENST00000378204 SAFBQ15424 915 aaKnown RBP eCLIP18■□□□□ 0.47
EXT1-201ENST00000378204 NFXL1Q6ZNB6 911 aa18■□□□□ 0.47
EXT1-201ENST00000378204 CDR1P51861 262 aa18■□□□□ 0.47
EXT1-201ENST00000378204 PTPRGP23470 1445 aa18■□□□□ 0.47
EXT1-201ENST00000378204 GNAI1P63096 354 aa18■□□□□ 0.47
EXT1-201ENST00000378204 STAC3Q96MF2 364 aa18■□□□□ 0.47
EXT1-201ENST00000378204 HMGN5P82970 282 aaKnown RBP18■□□□□ 0.47
EXT1-201ENST00000378204 DCTN1Q14203 1278 aa18■□□□□ 0.47
EXT1-201ENST00000378204 LEKR1Q6ZMV7 388 aa17.99■□□□□ 0.47
EXT1-201ENST00000378204 MYOM3Q5VTT5 1437 aa17.99■□□□□ 0.47
EXT1-201ENST00000378204 VPS37CA5D8V6 355 aaPredicted RBP17.99■□□□□ 0.47
EXT1-201ENST00000378204 MIA2Q96PC5 1412 aa17.99■□□□□ 0.47
EXT1-201ENST00000378204 DHX16O60231 1041 aaKnown RBP17.98■□□□□ 0.47
EXT1-201ENST00000378204 R3HCC1Q9Y3T6 440 aaKnown RBP17.98■□□□□ 0.47
EXT1-201ENST00000378204 TSPYL4Q9UJ04 414 aa17.97■□□□□ 0.47
EXT1-201ENST00000378204 CCDC73Q6ZRK6 1079 aa17.97■□□□□ 0.47
EXT1-201ENST00000378204 RALYLQ86SE5 291 aaKnown RBP17.97■□□□□ 0.47
EXT1-201ENST00000378204 WWC1Q8IX03 1113 aa17.97■□□□□ 0.47
EXT1-201ENST00000378204 DYDC1Q8WWB3 177 aa17.96■□□□□ 0.47
EXT1-201ENST00000378204 LNPKQ9C0E8 428 aa17.96■□□□□ 0.47
EXT1-201ENST00000378204 C22orf23Q9BZE7 217 aa17.96■□□□□ 0.47
EXT1-201ENST00000378204 MSH5O43196 834 aa17.96■□□□□ 0.47
EXT1-201ENST00000378204 SYTL4Q96C24 671 aaPredicted RBP17.96■□□□□ 0.47
EXT1-201ENST00000378204 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.95■□□□□ 0.46
EXT1-201ENST00000378204 CCDC43Q96MW1 224 aaKnown RBP17.95■□□□□ 0.46
EXT1-201ENST00000378204 NAT10Q9H0A0 1025 aaKnown RBP17.94■□□□□ 0.46
EXT1-201ENST00000378204 NINLQ9Y2I6 1382 aa17.93■□□□□ 0.46
EXT1-201ENST00000378204 FANCD2Q9BXW9 1451 aa17.93■□□□□ 0.46
EXT1-201ENST00000378204 MRE11P49959 708 aa17.93■□□□□ 0.46
EXT1-201ENST00000378204 RUFY1Q96T51 708 aa17.93■□□□□ 0.46
EXT1-201ENST00000378204 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.93■□□□□ 0.46
EXT1-201ENST00000378204 RIC3Q7Z5B4 369 aa17.92■□□□□ 0.46
EXT1-201ENST00000378204 RAPGEF4Q8WZA2 1011 aa17.92■□□□□ 0.46
EXT1-201ENST00000378204 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.91■□□□□ 0.46
EXT1-201ENST00000378204 ZMYND15Q9H091 742 aa17.91■□□□□ 0.46
EXT1-201ENST00000378204 PSMA5P28066 241 aa17.91■□□□□ 0.46
EXT1-201ENST00000378204 BRMS1Q9HCU9 246 aa17.91■□□□□ 0.46
EXT1-201ENST00000378204 XBP1P17861 261 aa17.91■□□□□ 0.46
EXT1-201ENST00000378204 CCDC7Q96M83 1385 aa17.9■□□□□ 0.46
EXT1-201ENST00000378204 IFT57Q9NWB7 429 aa17.9■□□□□ 0.46
EXT1-201ENST00000378204 CCDC39Q9UFE4 941 aa17.9■□□□□ 0.46
EXT1-201ENST00000378204 HMOX1P09601 288 aa17.9■□□□□ 0.46
EXT1-201ENST00000378204 UBTFL1P0CB47 393 aaPredicted RBP17.9■□□□□ 0.46
EXT1-201ENST00000378204 IL27Q8NEV9 243 aa17.9■□□□□ 0.46
EXT1-201ENST00000378204 OLFM4Q6UX06 510 aa17.89■□□□□ 0.45
EXT1-201ENST00000378204 CNTROBQ8N137 903 aa17.89■□□□□ 0.45
EXT1-201ENST00000378204 ERCC4Q92889 916 aaPredicted RBP17.89■□□□□ 0.45
EXT1-201ENST00000378204 NAP1L1P55209 391 aaKnown RBP17.89■□□□□ 0.45
EXT1-201ENST00000378204 PDIA4P13667 645 aaKnown RBP17.88■□□□□ 0.45
EXT1-201ENST00000378204 INCENPQ9NQS7 918 aa17.88■□□□□ 0.45
EXT1-201ENST00000378204 NEUROD6Q96NK8 337 aa17.88■□□□□ 0.45
EXT1-201ENST00000378204 CDC45O75419 566 aa17.88■□□□□ 0.45
EXT1-201ENST00000378204 MNS1Q8NEH6 495 aa17.88■□□□□ 0.45
EXT1-201ENST00000378204 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
EXT1-201ENST00000378204 HMGB1P09429 215 aaKnown RBP17.88■□□□□ 0.45
EXT1-201ENST00000378204 RBM33Q96EV2 1170 aaKnown RBP17.88■□□□□ 0.45
EXT1-201ENST00000378204 CT47A1Q5JQC4 288 aaPredicted RBP17.87■□□□□ 0.45
EXT1-201ENST00000378204 AEBP1Q8IUX7 1158 aa17.87■□□□□ 0.45
EXT1-201ENST00000378204 GIMAP7Q8NHV1 300 aa17.87■□□□□ 0.45
EXT1-201ENST00000378204 EPS15P42566 896 aa17.87■□□□□ 0.45
EXT1-201ENST00000378204 SDF4Q9BRK5 362 aa17.87■□□□□ 0.45
EXT1-201ENST00000378204 ODF2Q5BJF6 829 aa17.87■□□□□ 0.45
EXT1-201ENST00000378204 RUSC2Q8N2Y8 1516 aa17.87■□□□□ 0.45
EXT1-201ENST00000378204 CNTLNQ9NXG0 1405 aa17.87■□□□□ 0.45
EXT1-201ENST00000378204 GAPVD1Q14C86 1478 aa17.87■□□□□ 0.45
EXT1-201ENST00000378204 WASHC4Q2M389 1173 aa17.87■□□□□ 0.45
EXT1-201ENST00000378204 BRD4O60885 1362 aaPredicted RBP17.87■□□□□ 0.45
EXT1-201ENST00000378204 FBXW7Q969H0 707 aa17.87■□□□□ 0.45
EXT1-201ENST00000378204 NASPP49321 788 aaPredicted RBP17.86■□□□□ 0.45
EXT1-201ENST00000378204 CLASRPQ8N2M8 674 aaKnown RBP17.86■□□□□ 0.45
EXT1-201ENST00000378204 BBXQ8WY36 941 aaPredicted RBP17.86■□□□□ 0.45
EXT1-201ENST00000378204 FGD6Q6ZV73 1430 aa17.86■□□□□ 0.45
EXT1-201ENST00000378204 KIF7Q2M1P5 1343 aa17.86■□□□□ 0.45
EXT1-201ENST00000378204 PANK1Q8TE04 598 aa17.86■□□□□ 0.45
EXT1-201ENST00000378204 PLCD4Q9BRC7 762 aa17.86■□□□□ 0.45
EXT1-201ENST00000378204 PDCP20941 246 aa17.85■□□□□ 0.45
EXT1-201ENST00000378204 MCM2P49736 904 aa17.85■□□□□ 0.45
EXT1-201ENST00000378204 FOSBP53539 338 aa17.85■□□□□ 0.45
EXT1-201ENST00000378204 IRX3P78415 501 aaPredicted RBP17.85■□□□□ 0.45
EXT1-201ENST00000378204 OFD1O75665 1012 aa17.84■□□□□ 0.45
EXT1-201ENST00000378204 LETM1O95202 739 aaPredicted RBP17.84■□□□□ 0.45
EXT1-201ENST00000378204 ATF3P18847 181 aa17.84■□□□□ 0.45
EXT1-201ENST00000378204 CCDC173Q0VFZ6 552 aa17.84■□□□□ 0.45
EXT1-201ENST00000378204 RRBP1Q9P2E9 1410 aaKnown RBP17.84■□□□□ 0.45
EXT1-201ENST00000378204 AIMP1Q12904 312 aaKnown RBP17.84■□□□□ 0.45
EXT1-201ENST00000378204 SART3Q15020 963 aaKnown RBP17.84■□□□□ 0.45
EXT1-201ENST00000378204 RBM10P98175 930 aaKnown RBP17.84■□□□□ 0.45
EXT1-201ENST00000378204 GNAI3P08754 354 aa17.83■□□□□ 0.45
EXT1-201ENST00000378204 CYB5RLQ6IPT4 315 aa17.83■□□□□ 0.44
EXT1-201ENST00000378204 CCDC27Q2M243 656 aa17.83■□□□□ 0.44
EXT1-201ENST00000378204 HIP1O00291 1037 aa17.82■□□□□ 0.44
EXT1-201ENST00000378204 CCDC30Q5VVM6 783 aa17.82■□□□□ 0.44
EXT1-201ENST00000378204 PDCL3Q9H2J4 239 aa17.82■□□□□ 0.44
EXT1-201ENST00000378204 KIAA0754O94854 1291 aa17.82■□□□□ 0.44
EXT1-201ENST00000378204 NFKBIBQ15653 356 aa17.82■□□□□ 0.44
EXT1-201ENST00000378204 ZRSR2Q15696 482 aaKnown RBP17.82■□□□□ 0.44
EXT1-201ENST00000378204 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
EXT1-201ENST00000378204 MBD3O95983 291 aa17.82■□□□□ 0.44
EXT1-201ENST00000378204 CALCOCO1Q9P1Z2 691 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms