RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 KANK1Q14678 1352 aa14.24□□□□□ -0.13
PCDHGA1-201ENST00000378105 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.24□□□□□ -0.13
PCDHGA1-201ENST00000378105 NUTM2DQ5VT03 806 aaPredicted RBP14.24□□□□□ -0.13
PCDHGA1-201ENST00000378105 PRAG1Q86YV5 1406 aa14.24□□□□□ -0.13
PCDHGA1-201ENST00000378105 CFAP44Q96MT7 982 aa14.23□□□□□ -0.13
PCDHGA1-201ENST00000378105 MED14O60244 1454 aa14.23□□□□□ -0.13
PCDHGA1-201ENST00000378105 SCAPERQ9BY12 1400 aa14.22□□□□□ -0.13
PCDHGA1-201ENST00000378105 HOMEZQ8IX15 550 aa14.22□□□□□ -0.13
PCDHGA1-201ENST00000378105 HNRNPUQ00839 825 aaKnown RBP eCLIP14.21□□□□□ -0.13
PCDHGA1-201ENST00000378105 USP32Q8NFA0 1604 aa14.21□□□□□ -0.13
PCDHGA1-201ENST00000378105 E9PSI1 815 aa14.21□□□□□ -0.13
PCDHGA1-201ENST00000378105 AFAP1Q8N556 730 aa14.21□□□□□ -0.13
PCDHGA1-201ENST00000378105 IPO4Q8TEX9 1081 aaKnown RBP14.21□□□□□ -0.13
PCDHGA1-201ENST00000378105 PRDM4Q9UKN5 801 aa14.21□□□□□ -0.13
PCDHGA1-201ENST00000378105 NWD1Q149M9 1564 aa14.21□□□□□ -0.14
PCDHGA1-201ENST00000378105 CNPY4Q8N129 248 aa14.2□□□□□ -0.14
PCDHGA1-201ENST00000378105 NPATQ14207 1427 aa14.2□□□□□ -0.14
PCDHGA1-201ENST00000378105 B4GALNT3Q6L9W6 998 aa14.2□□□□□ -0.14
PCDHGA1-201ENST00000378105 WASHC2CQ9Y4E1 1318 aa14.2□□□□□ -0.14
PCDHGA1-201ENST00000378105 FRAT1Q92837 279 aaPredicted RBP14.2□□□□□ -0.14
PCDHGA1-201ENST00000378105 MRS2Q9HD23 443 aa14.2□□□□□ -0.14
PCDHGA1-201ENST00000378105 RPRD2Q5VT52 1461 aaKnown RBP14.19□□□□□ -0.14
PCDHGA1-201ENST00000378105 SETBP1Q9Y6X0 1596 aa14.19□□□□□ -0.14
PCDHGA1-201ENST00000378105 SLIT1O75093 1534 aa14.19□□□□□ -0.14
PCDHGA1-201ENST00000378105 GSE1Q14687 1217 aa14.19□□□□□ -0.14
PCDHGA1-201ENST00000378105 STK26Q9P289 416 aa14.19□□□□□ -0.14
PCDHGA1-201ENST00000378105 ZBTB7CA1YPR0 619 aa14.18□□□□□ -0.14
PCDHGA1-201ENST00000378105 ZNF830Q96NB3 372 aaPredicted RBP14.18□□□□□ -0.14
PCDHGA1-201ENST00000378105 ARHGAP23Q9P227 1491 aa14.18□□□□□ -0.14
PCDHGA1-201ENST00000378105 NRKQ7Z2Y5 1582 aa14.18□□□□□ -0.14
PCDHGA1-201ENST00000378105 POGKQ9P215 609 aa14.18□□□□□ -0.14
PCDHGA1-201ENST00000378105 ZFYVE9O95405 1425 aa14.17□□□□□ -0.14
PCDHGA1-201ENST00000378105 IPO9Q96P70 1041 aaKnown RBP14.16□□□□□ -0.14
PCDHGA1-201ENST00000378105 FAM43AQ8N2R8 423 aa14.16□□□□□ -0.14
PCDHGA1-201ENST00000378105 CFAP65Q6ZU64 1925 aaKnown RBP14.16□□□□□ -0.14
PCDHGA1-201ENST00000378105 RRAGDQ9NQL2 400 aaPredicted RBP14.16□□□□□ -0.14
PCDHGA1-201ENST00000378105 L3MBTL2Q969R5 705 aa14.15□□□□□ -0.14
PCDHGA1-201ENST00000378105 DHX29Q7Z478 1369 aaKnown RBP14.15□□□□□ -0.14
PCDHGA1-201ENST00000378105 ERVK-7P63135 1459 aa14.14□□□□□ -0.15
PCDHGA1-201ENST00000378105 PNNQ9H307 717 aaKnown RBP14.14□□□□□ -0.15
PCDHGA1-201ENST00000378105 ANKRD30BQ9BXX2 1392 aa14.14□□□□□ -0.15
PCDHGA1-201ENST00000378105 NALCNQ8IZF0 1738 aa14.14□□□□□ -0.15
PCDHGA1-201ENST00000378105 TNNT2P45379 298 aaPredicted RBP14.12□□□□□ -0.15
PCDHGA1-201ENST00000378105 WWC1Q8IX03 1113 aa14.12□□□□□ -0.15
PCDHGA1-201ENST00000378105 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.12□□□□□ -0.15
PCDHGA1-201ENST00000378105 WASHC2AQ641Q2 1341 aa14.12□□□□□ -0.15
PCDHGA1-201ENST00000378105 PPM1GO15355 546 aaPredicted RBP14.12□□□□□ -0.15
PCDHGA1-201ENST00000378105 LMOD2Q6P5Q4 547 aa14.11□□□□□ -0.15
PCDHGA1-201ENST00000378105 CERS3Q8IU89 383 aa14.11□□□□□ -0.15
PCDHGA1-201ENST00000378105 FTSJ3Q8IY81 847 aaKnown RBP14.11□□□□□ -0.15
PCDHGA1-201ENST00000378105 LMTK3Q96Q04 1460 aa14.1□□□□□ -0.15
PCDHGA1-201ENST00000378105 KCNG1Q9UIX4 513 aa14.1□□□□□ -0.15
PCDHGA1-201ENST00000378105 ANKRD26Q9UPS8 1709 aa14.09□□□□□ -0.15
PCDHGA1-201ENST00000378105 HSPA5P11021 654 aaKnown RBP14.09□□□□□ -0.15
PCDHGA1-201ENST00000378105 RAPGEF3O95398 923 aa14.08□□□□□ -0.16
PCDHGA1-201ENST00000378105 RGPD8O14715 1765 aaPredicted RBP14.08□□□□□ -0.16
PCDHGA1-201ENST00000378105 UHRF1BP1Q6BDS2 1440 aa14.08□□□□□ -0.16
PCDHGA1-201ENST00000378105 ANKRD50Q9ULJ7 1429 aa14.08□□□□□ -0.16
PCDHGA1-201ENST00000378105 ADGRB2O60241 1585 aa14.07□□□□□ -0.16
PCDHGA1-201ENST00000378105 GOLGB1Q14789 3259 aaKnown RBP14.07□□□□□ -0.16
PCDHGA1-201ENST00000378105 WDR43Q15061 677 aaKnown RBP eCLIP14.07□□□□□ -0.16
PCDHGA1-201ENST00000378105 KNSTRNQ9Y448 316 aa14.07□□□□□ -0.16
PCDHGA1-201ENST00000378105 AKAP12Q02952 1782 aa14.06□□□□□ -0.16
PCDHGA1-201ENST00000378105 SOX12O15370 315 aa14.06□□□□□ -0.16
PCDHGA1-201ENST00000378105 MYOM2P54296 1465 aa14.06□□□□□ -0.16
PCDHGA1-201ENST00000378105 CC2D1BQ5T0F9 858 aaKnown RBP14.06□□□□□ -0.16
PCDHGA1-201ENST00000378105 KIF15Q9NS87 1388 aa14.06□□□□□ -0.16
PCDHGA1-201ENST00000378105 SRPK2P78362 688 aaKnown RBP14.05□□□□□ -0.16
PCDHGA1-201ENST00000378105 AEBP1Q8IUX7 1158 aa14.05□□□□□ -0.16
PCDHGA1-201ENST00000378105 PATL2C9JE40 543 aaKnown RBP14.04□□□□□ -0.16
PCDHGA1-201ENST00000378105 A0A0G2JS52 829 aa14.03□□□□□ -0.16
PCDHGA1-201ENST00000378105 ABCA3Q99758 1704 aa14.03□□□□□ -0.16
PCDHGA1-201ENST00000378105 CPS1P31327 1500 aa14.02□□□□□ -0.16
PCDHGA1-201ENST00000378105 NUTM2FA1L443 756 aa14.02□□□□□ -0.17
PCDHGA1-201ENST00000378105 CALD1Q05682 793 aaKnown RBP14.02□□□□□ -0.17
PCDHGA1-201ENST00000378105 CDCA8Q53HL2 280 aa14.02□□□□□ -0.17
PCDHGA1-201ENST00000378105 QRICH2Q9H0J4 1663 aa14.01□□□□□ -0.17
PCDHGA1-201ENST00000378105 A2ML1A8K2U0 1454 aa14.01□□□□□ -0.17
PCDHGA1-201ENST00000378105 SHPRHQ149N8 1683 aa14.01□□□□□ -0.17
PCDHGA1-201ENST00000378105 ZBTB22O15209 634 aa14□□□□□ -0.17
PCDHGA1-201ENST00000378105 TMED8Q6PL24 325 aaPredicted RBP14□□□□□ -0.17
PCDHGA1-201ENST00000378105 ROCK2O75116 1388 aaKnown RBP14□□□□□ -0.17
PCDHGA1-201ENST00000378105 TMF1P82094 1093 aa14□□□□□ -0.17
PCDHGA1-201ENST00000378105 ANP32BQ92688 251 aaKnown RBP14□□□□□ -0.17
PCDHGA1-201ENST00000378105 HDGFP51858 240 aaKnown RBP14□□□□□ -0.17
PCDHGA1-201ENST00000378105 UTRNP46939 3433 aa13.99□□□□□ -0.17
PCDHGA1-201ENST00000378105 TRPM3Q9HCF6 1732 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA1-201ENST00000378105 SLC4A3P48751 1232 aa13.99□□□□□ -0.17
PCDHGA1-201ENST00000378105 TRAK1Q9UPV9 953 aa13.99□□□□□ -0.17
PCDHGA1-201ENST00000378105 NEUROD2Q15784 382 aa13.99□□□□□ -0.17
PCDHGA1-201ENST00000378105 CCDC144AA2RUR9 1427 aa13.98□□□□□ -0.17
PCDHGA1-201ENST00000378105 MON2Q7Z3U7 1717 aa13.97□□□□□ -0.17
PCDHGA1-201ENST00000378105 CDK11BP21127 795 aaKnown RBP13.97□□□□□ -0.17
PCDHGA1-201ENST00000378105 ZBTB9Q96C00 473 aa13.97□□□□□ -0.17
PCDHGA1-201ENST00000378105 PIK3C2GO75747 1445 aa13.96□□□□□ -0.17
PCDHGA1-201ENST00000378105 CHMP4CQ96CF2 233 aa13.96□□□□□ -0.17
PCDHGA1-201ENST00000378105 TEX2Q8IWB9 1127 aa13.95□□□□□ -0.18
PCDHGA1-201ENST00000378105 DDRGK1Q96HY6 314 aa13.95□□□□□ -0.18
PCDHGA1-201ENST00000378105 LTBP4Q8N2S1 1624 aa13.95□□□□□ -0.18
PCDHGA1-201ENST00000378105 FMN2Q9NZ56 1722 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms