RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 PLXNC1O60486 1568 aa19.73■□□□□ 0.75
CSNK1A1-202ENST00000377843 SAMD9LQ8IVG5 1584 aa19.73■□□□□ 0.75
CSNK1A1-202ENST00000377843 A0A0U1RQG5 324 aaPredicted RBP19.72■□□□□ 0.75
CSNK1A1-202ENST00000377843 UHRF1BP1LA0JNW5 1464 aa19.72■□□□□ 0.75
CSNK1A1-202ENST00000377843 SHANK2Q9UPX8 1470 aa19.72■□□□□ 0.75
CSNK1A1-202ENST00000377843 ASXL1Q8IXJ9 1541 aa19.71■□□□□ 0.75
CSNK1A1-202ENST00000377843 RWDD1Q9H446 243 aaPredicted RBP19.71■□□□□ 0.75
CSNK1A1-202ENST00000377843 NASPP49321 788 aaPredicted RBP19.71■□□□□ 0.75
CSNK1A1-202ENST00000377843 RAB3GAP1Q15042 981 aa19.7■□□□□ 0.74
CSNK1A1-202ENST00000377843 SYCP2Q9BX26 1530 aa19.7■□□□□ 0.74
CSNK1A1-202ENST00000377843 R3HCC1Q9Y3T6 440 aaKnown RBP19.7■□□□□ 0.74
CSNK1A1-202ENST00000377843 AFAP1Q8N556 730 aa19.69■□□□□ 0.74
CSNK1A1-202ENST00000377843 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.69■□□□□ 0.74
CSNK1A1-202ENST00000377843 SMC5Q8IY18 1101 aa19.69■□□□□ 0.74
CSNK1A1-202ENST00000377843 NPM1P06748 294 aaKnown RBP eCLIP19.68■□□□□ 0.74
CSNK1A1-202ENST00000377843 ARID3AQ99856 593 aa19.68■□□□□ 0.74
CSNK1A1-202ENST00000377843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.741e-7■■□□□ 14.4
CSNK1A1-202ENST00000377843 FOXD4L1Q9NU39 408 aa19.67■□□□□ 0.74
CSNK1A1-202ENST00000377843 TERF1P54274 439 aa19.67■□□□□ 0.74
CSNK1A1-202ENST00000377843 RRP7AQ9Y3A4 280 aaKnown RBP19.67■□□□□ 0.74
CSNK1A1-202ENST00000377843 PREX2Q70Z35 1606 aa19.67■□□□□ 0.74
CSNK1A1-202ENST00000377843 CCDC141Q6ZP82 1450 aa19.66■□□□□ 0.74
CSNK1A1-202ENST00000377843 EFCAB2Q5VUJ9 269 aa19.66■□□□□ 0.74
CSNK1A1-202ENST00000377843 GBP4Q96PP9 640 aa19.66■□□□□ 0.74
CSNK1A1-202ENST00000377843 ASXL2Q76L83 1435 aa19.66■□□□□ 0.74
CSNK1A1-202ENST00000377843 AAMPQ13685 434 aa19.66■□□□□ 0.74
CSNK1A1-202ENST00000377843 NEUROD2Q15784 382 aa19.66■□□□□ 0.74
CSNK1A1-202ENST00000377843 SKOR2Q2VWA4 1001 aaPredicted RBP19.66■□□□□ 0.74
CSNK1A1-202ENST00000377843 CD2BP2O95400 341 aaKnown RBP19.65■□□□□ 0.74
CSNK1A1-202ENST00000377843 MSNP26038 577 aaKnown RBP19.65■□□□□ 0.74
CSNK1A1-202ENST00000377843 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.65■□□□□ 0.74
CSNK1A1-202ENST00000377843 SNX21Q969T3 373 aa19.65■□□□□ 0.74
CSNK1A1-202ENST00000377843 PLCH2O75038 1416 aa19.63■□□□□ 0.73
CSNK1A1-202ENST00000377843 SYNMO15061 1565 aa19.63■□□□□ 0.73
CSNK1A1-202ENST00000377843 RBM25P49756 843 aaKnown RBP19.63■□□□□ 0.73
CSNK1A1-202ENST00000377843 CIZ1Q9ULV3 898 aaPredicted RBP19.63■□□□□ 0.73
CSNK1A1-202ENST00000377843 XPCQ01831 940 aaPredicted RBP19.63■□□□□ 0.73
CSNK1A1-202ENST00000377843 EIF2AK4Q9P2K8 1649 aaKnown RBP19.63■□□□□ 0.73
CSNK1A1-202ENST00000377843 UQCRHLA0A096LP55 91 aa19.62■□□□□ 0.73
CSNK1A1-202ENST00000377843 UQCRHP07919 91 aa19.62■□□□□ 0.73
CSNK1A1-202ENST00000377843 HSP90AB1P08238 724 aaKnown RBP19.62■□□□□ 0.73
CSNK1A1-202ENST00000377843 MYO5CQ9NQX4 1742 aa19.62■□□□□ 0.73
CSNK1A1-202ENST00000377843 NPC1L1Q9UHC9 1359 aa19.62■□□□□ 0.73
CSNK1A1-202ENST00000377843 SSFA2P28290 1259 aa19.62■□□□□ 0.73
CSNK1A1-202ENST00000377843 TRAPPC8Q9Y2L5 1435 aa19.62■□□□□ 0.73
CSNK1A1-202ENST00000377843 MVPQ14764 893 aaKnown RBP19.61■□□□□ 0.73
CSNK1A1-202ENST00000377843 MAP7D2Q96T17 732 aa19.61■□□□□ 0.73
CSNK1A1-202ENST00000377843 PRDM10Q9NQV6 1147 aa19.61■□□□□ 0.73
CSNK1A1-202ENST00000377843 RNF17Q9BXT8 1623 aaKnown RBP19.61■□□□□ 0.73
CSNK1A1-202ENST00000377843 KIF2CQ99661 725 aa19.61■□□□□ 0.73
CSNK1A1-202ENST00000377843 NGEFQ8N5V2 710 aa19.6■□□□□ 0.73
CSNK1A1-202ENST00000377843 SMAP1Q8IYB5 467 aaPredicted RBP19.59■□□□□ 0.73
CSNK1A1-202ENST00000377843 ZHX1Q9UKY1 873 aaPredicted RBP19.59■□□□□ 0.73
CSNK1A1-202ENST00000377843 SCAPERQ9BY12 1400 aa19.59■□□□□ 0.73
CSNK1A1-202ENST00000377843 MYOM1P52179 1685 aa19.58■□□□□ 0.73
CSNK1A1-202ENST00000377843 ZNF500O60304 480 aaPredicted RBP19.58■□□□□ 0.72
CSNK1A1-202ENST00000377843 NOL7Q9UMY1 257 aaKnown RBP19.58■□□□□ 0.72
CSNK1A1-202ENST00000377843 CARD14Q9BXL6 1004 aa19.56■□□□□ 0.72
CSNK1A1-202ENST00000377843 DDX49Q9Y6V7 483 aaKnown RBP19.56■□□□□ 0.72
CSNK1A1-202ENST00000377843 KLHL40Q2TBA0 621 aa19.56■□□□□ 0.72
CSNK1A1-202ENST00000377843 ANP32BQ92688 251 aaKnown RBP19.56■□□□□ 0.72
CSNK1A1-202ENST00000377843 RBM42Q9BTD8 480 aaKnown RBP19.56■□□□□ 0.72
CSNK1A1-202ENST00000377843 IBTKQ9P2D0 1353 aaPredicted RBP19.55■□□□□ 0.72
CSNK1A1-202ENST00000377843 PHF23Q9BUL5 403 aaPredicted RBP19.55■□□□□ 0.72
CSNK1A1-202ENST00000377843 GAS2L2Q8NHY3 880 aa19.55■□□□□ 0.72
CSNK1A1-202ENST00000377843 RBSNQ9H1K0 784 aa19.55■□□□□ 0.72
CSNK1A1-202ENST00000377843 TCP11L2Q8N4U5 519 aa19.54■□□□□ 0.72
CSNK1A1-202ENST00000377843 PTMSP20962 102 aa19.54■□□□□ 0.72
CSNK1A1-202ENST00000377843 BAG4O95429 457 aaKnown RBP19.53■□□□□ 0.72
CSNK1A1-202ENST00000377843 HDAC1Q13547 482 aaPredicted RBP19.53■□□□□ 0.72
CSNK1A1-202ENST00000377843 PDLIM2Q96JY6 352 aa19.53■□□□□ 0.72
CSNK1A1-202ENST00000377843 ARHGEF5Q12774 1597 aa19.53■□□□□ 0.72
CSNK1A1-202ENST00000377843 CDCA8Q53HL2 280 aa19.53■□□□□ 0.72
CSNK1A1-202ENST00000377843 HS1BP3Q53T59 392 aa19.53■□□□□ 0.72
CSNK1A1-202ENST00000377843 IQGAP1P46940 1657 aa19.53■□□□□ 0.72
CSNK1A1-202ENST00000377843 ZNF445P59923 1031 aa19.52■□□□□ 0.72
CSNK1A1-202ENST00000377843 RSPH4AQ5TD94 716 aa19.52■□□□□ 0.72
CSNK1A1-202ENST00000377843 DZIP1LQ8IYY4 767 aaKnown RBP19.52■□□□□ 0.72
CSNK1A1-202ENST00000377843 FANCAO15360 1455 aa19.52■□□□□ 0.72
CSNK1A1-202ENST00000377843 SPAG9O60271 1321 aaKnown RBP19.52■□□□□ 0.71
CSNK1A1-202ENST00000377843 CLEC17AQ6ZS10 378 aa19.51■□□□□ 0.71
CSNK1A1-202ENST00000377843 IQSEC2Q5JU85 1478 aa19.51■□□□□ 0.71
CSNK1A1-202ENST00000377843 K7ELQ4 463 aaPredicted RBP19.51■□□□□ 0.71
CSNK1A1-202ENST00000377843 FTSJ3Q8IY81 847 aaKnown RBP19.51■□□□□ 0.71
CSNK1A1-202ENST00000377843 DYNC1I1O14576 645 aa19.5■□□□□ 0.71
CSNK1A1-202ENST00000377843 ZSCAN23Q3MJ62 389 aa19.5■□□□□ 0.71
CSNK1A1-202ENST00000377843 ZKSCAN2Q63HK3 967 aa19.5■□□□□ 0.71
CSNK1A1-202ENST00000377843 POLR3AO14802 1390 aaPredicted RBP19.5■□□□□ 0.71
CSNK1A1-202ENST00000377843 CAVIN1Q6NZI2 390 aaKnown RBP19.5■□□□□ 0.71
CSNK1A1-202ENST00000377843 RUNDC1Q96C34 613 aa19.5■□□□□ 0.71
CSNK1A1-202ENST00000377843 WDR63Q8IWG1 891 aa19.49■□□□□ 0.71
CSNK1A1-202ENST00000377843 JARID2Q92833 1246 aaPredicted RBP19.49■□□□□ 0.71
CSNK1A1-202ENST00000377843 ZKSCAN5Q9Y2L8 839 aa19.49■□□□□ 0.71
CSNK1A1-202ENST00000377843 PRIM1P49642 420 aaKnown RBP19.48■□□□□ 0.71
CSNK1A1-202ENST00000377843 TRIM27P14373 513 aa19.48■□□□□ 0.71
CSNK1A1-202ENST00000377843 FGD1P98174 961 aa19.48■□□□□ 0.71
CSNK1A1-202ENST00000377843 SCAF11Q99590 1463 aaKnown RBP19.48■□□□□ 0.71
CSNK1A1-202ENST00000377843 LNPKQ9C0E8 428 aa19.47■□□□□ 0.71
CSNK1A1-202ENST00000377843 MADDQ8WXG6 1647 aa19.47■□□□□ 0.71
CSNK1A1-202ENST00000377843 ABCC1P33527 1531 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms