RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 ROCK1Q13464 1354 aa11□□□□□ -0.65
CRNKL1-201ENST00000377327 CBX1P83916 185 aa11□□□□□ -0.65
CRNKL1-201ENST00000377327 PTPN23Q9H3S7 1636 aa11□□□□□ -0.65
CRNKL1-201ENST00000377327 PDS5BQ9NTI5 1447 aa11□□□□□ -0.65
CRNKL1-201ENST00000377327 RAD54L2Q9Y4B4 1467 aa11□□□□□ -0.65
CRNKL1-201ENST00000377327 RARSP54136 660 aaKnown RBP11□□□□□ -0.65
CRNKL1-201ENST00000377327 GPS2Q13227 327 aa11□□□□□ -0.65
CRNKL1-201ENST00000377327 TAF3Q5VWG9 929 aa11□□□□□ -0.65
CRNKL1-201ENST00000377327 GOLGA6L1Q8N7Z2 621 aa11□□□□□ -0.65
CRNKL1-201ENST00000377327 ERBINQ96RT1 1412 aa10.99□□□□□ -0.65
CRNKL1-201ENST00000377327 NOB1Q9ULX3 412 aaKnown RBP10.99□□□□□ -0.65
CRNKL1-201ENST00000377327 SYCE3A1L190 88 aa10.99□□□□□ -0.65
CRNKL1-201ENST00000377327 SSFA2P28290 1259 aa10.99□□□□□ -0.65
CRNKL1-201ENST00000377327 KLHL40Q2TBA0 621 aa10.99□□□□□ -0.65
CRNKL1-201ENST00000377327 SMC3Q9UQE7 1217 aa10.99□□□□□ -0.65
CRNKL1-201ENST00000377327 KIF3BO15066 747 aa10.98□□□□□ -0.65
CRNKL1-201ENST00000377327 OFD1O75665 1012 aa10.98□□□□□ -0.65
CRNKL1-201ENST00000377327 FAM184AQ8NB25 1140 aa10.98□□□□□ -0.65
CRNKL1-201ENST00000377327 FANCD2Q9BXW9 1451 aa10.98□□□□□ -0.65
CRNKL1-201ENST00000377327 PCF11O94913 1555 aaKnown RBP10.98□□□□□ -0.65
CRNKL1-201ENST00000377327 DAPK1P53355 1430 aa10.98□□□□□ -0.65
CRNKL1-201ENST00000377327 AQRO60306 1485 aaKnown RBP eCLIP10.98□□□□□ -0.657e-7■■■■□ 20
CRNKL1-201ENST00000377327 DIAPH1O60610 1272 aaKnown RBP10.98□□□□□ -0.65
CRNKL1-201ENST00000377327 TSR2Q969E8 191 aaKnown RBP10.98□□□□□ -0.65
CRNKL1-201ENST00000377327 PTPRKQ15262 1439 aa10.97□□□□□ -0.65
CRNKL1-201ENST00000377327 TPD52L1Q16890 204 aaPredicted RBP10.97□□□□□ -0.65
CRNKL1-201ENST00000377327 VPS37CA5D8V6 355 aaPredicted RBP10.96□□□□□ -0.65
CRNKL1-201ENST00000377327 SEC24BO95487 1268 aa10.96□□□□□ -0.65
CRNKL1-201ENST00000377327 ARGLU1Q9NWB6 273 aaPredicted RBP10.96□□□□□ -0.65
CRNKL1-201ENST00000377327 EVC2Q86UK5 1308 aa10.96□□□□□ -0.65
CRNKL1-201ENST00000377327 DHX29Q7Z478 1369 aaKnown RBP10.96□□□□□ -0.66
CRNKL1-201ENST00000377327 BAG4O95429 457 aaKnown RBP10.96□□□□□ -0.66
CRNKL1-201ENST00000377327 SPC24Q8NBT2 197 aa10.96□□□□□ -0.66
CRNKL1-201ENST00000377327 GPATCH3Q96I76 525 aa10.96□□□□□ -0.66
CRNKL1-201ENST00000377327 TRIM5Q9C035 493 aa10.96□□□□□ -0.66
CRNKL1-201ENST00000377327 SUPT6HQ7KZ85 1726 aaKnown RBP10.96□□□□□ -0.66
CRNKL1-201ENST00000377327 CC2D2AQ9P2K1 1620 aa10.96□□□□□ -0.66
CRNKL1-201ENST00000377327 GNAI1P63096 354 aa10.95□□□□□ -0.66
CRNKL1-201ENST00000377327 BCL11BQ9C0K0 894 aaPredicted RBP10.95□□□□□ -0.66
CRNKL1-201ENST00000377327 HOMER1Q86YM7 354 aa10.95□□□□□ -0.66
CRNKL1-201ENST00000377327 CCDC112Q8NEF3 446 aa10.95□□□□□ -0.66
CRNKL1-201ENST00000377327 SPAG9O60271 1321 aaKnown RBP10.95□□□□□ -0.66
CRNKL1-201ENST00000377327 KDM2BQ8NHM5 1336 aa10.95□□□□□ -0.66
CRNKL1-201ENST00000377327 GNL2Q13823 731 aaKnown RBP10.95□□□□□ -0.66
CRNKL1-201ENST00000377327 GGT6Q6P531 493 aa10.95□□□□□ -0.66
CRNKL1-201ENST00000377327 BICD2Q8TD16 824 aa10.95□□□□□ -0.66
CRNKL1-201ENST00000377327 C1orf115Q9H7X2 142 aa10.95□□□□□ -0.66
CRNKL1-201ENST00000377327 GAPVD1Q14C86 1478 aa10.95□□□□□ -0.66
CRNKL1-201ENST00000377327 H3BQV1 296 aa10.95□□□□□ -0.66
CRNKL1-201ENST00000377327 HSP90B1P14625 803 aaKnown RBP10.95□□□□□ -0.66
CRNKL1-201ENST00000377327 IFFO2Q5TF58 517 aa10.95□□□□□ -0.66
CRNKL1-201ENST00000377327 SOX12O15370 315 aa10.94□□□□□ -0.66
CRNKL1-201ENST00000377327 C14orf37Q86TY3 774 aa10.94□□□□□ -0.66
CRNKL1-201ENST00000377327 JPH4Q96JJ6 628 aa10.94□□□□□ -0.66
CRNKL1-201ENST00000377327 HS1BP3Q53T59 392 aa10.94□□□□□ -0.66
CRNKL1-201ENST00000377327 CCAR2Q8N163 923 aaKnown RBP10.94□□□□□ -0.66
CRNKL1-201ENST00000377327 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.94□□□□□ -0.66
CRNKL1-201ENST00000377327 ZKSCAN1P17029 563 aaPredicted RBP10.93□□□□□ -0.66
CRNKL1-201ENST00000377327 SF3A1Q15459 793 aaKnown RBP10.93□□□□□ -0.66
CRNKL1-201ENST00000377327 WDR33Q9C0J8 1336 aaKnown RBP10.93□□□□□ -0.66
CRNKL1-201ENST00000377327 PCDHB15Q9Y5E8 787 aa10.93□□□□□ -0.66
CRNKL1-201ENST00000377327 FIBPO43427 364 aa10.93□□□□□ -0.66
CRNKL1-201ENST00000377327 PRIMPOLQ96LW4 560 aa10.93□□□□□ -0.66
CRNKL1-201ENST00000377327 SCAPERQ9BY12 1400 aa10.93□□□□□ -0.66
CRNKL1-201ENST00000377327 ERC2O15083 957 aa10.93□□□□□ -0.66
CRNKL1-201ENST00000377327 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.93□□□□□ -0.66
CRNKL1-201ENST00000377327 TMEM57Q8N5G2 664 aa10.93□□□□□ -0.66
CRNKL1-201ENST00000377327 RUFY2Q8WXA3 655 aa10.93□□□□□ -0.66
CRNKL1-201ENST00000377327 ZKSCAN5Q9Y2L8 839 aa10.93□□□□□ -0.66
CRNKL1-201ENST00000377327 CCDC192P0DO97 292 aa10.92□□□□□ -0.66
CRNKL1-201ENST00000377327 MNS1Q8NEH6 495 aa10.92□□□□□ -0.66
CRNKL1-201ENST00000377327 PARD3Q8TEW0 1356 aa10.92□□□□□ -0.66
CRNKL1-201ENST00000377327 PPP4R3BQ5MIZ7 849 aa10.92□□□□□ -0.66
CRNKL1-201ENST00000377327 PRDM2Q13029 1718 aa10.92□□□□□ -0.66
CRNKL1-201ENST00000377327 CCDC27Q2M243 656 aa10.92□□□□□ -0.66
CRNKL1-201ENST00000377327 ZSCAN23Q3MJ62 389 aa10.91□□□□□ -0.66
CRNKL1-201ENST00000377327 SNX21Q969T3 373 aa10.91□□□□□ -0.66
CRNKL1-201ENST00000377327 CHMP4AQ9BY43 222 aa10.91□□□□□ -0.66
CRNKL1-201ENST00000377327 HDAC5Q9UQL6 1122 aa10.91□□□□□ -0.66
CRNKL1-201ENST00000377327 NOM1Q5C9Z4 860 aaKnown RBP10.91□□□□□ -0.66
CRNKL1-201ENST00000377327 SMAP1Q8IYB5 467 aaPredicted RBP10.91□□□□□ -0.66
CRNKL1-201ENST00000377327 CGNQ9P2M7 1197 aaKnown RBP10.91□□□□□ -0.66
CRNKL1-201ENST00000377327 CWC15Q9P013 229 aaKnown RBP10.9□□□□□ -0.66
CRNKL1-201ENST00000377327 BMP2KLQ5H9B9 411 aa10.9□□□□□ -0.66
CRNKL1-201ENST00000377327 CFAP70Q5T0N1 1121 aa10.9□□□□□ -0.66
CRNKL1-201ENST00000377327 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.9□□□□□ -0.66
CRNKL1-201ENST00000377327 TERF1P54274 439 aa10.9□□□□□ -0.67
CRNKL1-201ENST00000377327 NPHP1O15259 732 aa10.89□□□□□ -0.67
CRNKL1-201ENST00000377327 RAB3GAP1Q15042 981 aa10.89□□□□□ -0.67
CRNKL1-201ENST00000377327 SMC5Q8IY18 1101 aa10.89□□□□□ -0.67
CRNKL1-201ENST00000377327 NUTM2DQ5VT03 806 aaPredicted RBP10.89□□□□□ -0.67
CRNKL1-201ENST00000377327 SSH1Q8WYL5 1049 aa10.89□□□□□ -0.67
CRNKL1-201ENST00000377327 GGNBP2Q9H3C7 697 aa10.89□□□□□ -0.67
CRNKL1-201ENST00000377327 ABCC5O15440 1437 aa10.89□□□□□ -0.67
CRNKL1-201ENST00000377327 CCDC94Q9BW85 323 aaPredicted RBP10.89□□□□□ -0.67
CRNKL1-201ENST00000377327 SLC12A5Q9H2X9 1139 aa10.89□□□□□ -0.67
CRNKL1-201ENST00000377327 USP25Q9UHP3 1055 aa10.88□□□□□ -0.67
CRNKL1-201ENST00000377327 LRSAM1Q6UWE0 723 aa10.88□□□□□ -0.67
CRNKL1-201ENST00000377327 ZNF428Q96B54 188 aa10.88□□□□□ -0.67
CRNKL1-201ENST00000377327 SPDYE4A6NLX3 237 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms