RNA–Protein interactions for RNA: ENST00000376678.6

LINC01257-201, Transcript of long intergenic non-protein coding RNA 1257, humanhuman

TSL 1 (best) BASIC

Gene LINC01257, Length 2,473 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01257-201ENST00000376678 SCAF11Q99590 1463 aaKnown RBP18.36■□□□□ 0.53
LINC01257-201ENST00000376678 HSPA2P54652 639 aa18.35■□□□□ 0.53
LINC01257-201ENST00000376678 TCERG1O14776 1098 aaKnown RBP18.35■□□□□ 0.53
LINC01257-201ENST00000376678 ZBTB47Q9UFB7 747 aaPredicted RBP18.35■□□□□ 0.53
LINC01257-201ENST00000376678 RCAN3Q9UKA8 241 aa18.35■□□□□ 0.53
LINC01257-201ENST00000376678 GPRASP1Q5JY77 1395 aa18.34■□□□□ 0.53
LINC01257-201ENST00000376678 C14orf93Q9H972 538 aaKnown RBP18.34■□□□□ 0.53
LINC01257-201ENST00000376678 NBR1Q14596 966 aa18.33■□□□□ 0.53
LINC01257-201ENST00000376678 LMTK3Q96Q04 1460 aa18.33■□□□□ 0.53
LINC01257-201ENST00000376678 EXOC6Q8TAG9 804 aa18.33■□□□□ 0.52
LINC01257-201ENST00000376678 PLEKHG1Q9ULL1 1385 aa18.32■□□□□ 0.52
LINC01257-201ENST00000376678 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
LINC01257-201ENST00000376678 PER1O15534 1290 aaPredicted RBP18.32■□□□□ 0.52
LINC01257-201ENST00000376678 TMEM132EQ6IEE7 984 aa18.32■□□□□ 0.52
LINC01257-201ENST00000376678 NCKAP5LQ9HCH0 1330 aa18.31■□□□□ 0.52
LINC01257-201ENST00000376678 MS4A1P11836 297 aa18.3■□□□□ 0.52
LINC01257-201ENST00000376678 BLMP54132 1417 aaPredicted RBP18.3■□□□□ 0.52
LINC01257-201ENST00000376678 KIAA1210Q9ULL0 1709 aa18.3■□□□□ 0.52
LINC01257-201ENST00000376678 SLC26A8Q96RN1 970 aa18.3■□□□□ 0.52
LINC01257-201ENST00000376678 ALKQ9UM73 1620 aa18.3■□□□□ 0.52
LINC01257-201ENST00000376678 IQGAP1P46940 1657 aa18.3■□□□□ 0.52
LINC01257-201ENST00000376678 SETBP1Q9Y6X0 1596 aa18.29■□□□□ 0.52
LINC01257-201ENST00000376678 NRXN3Q9Y4C0 1643 aa18.28■□□□□ 0.52
LINC01257-201ENST00000376678 BACH2Q9BYV9 841 aa18.26■□□□□ 0.51
LINC01257-201ENST00000376678 ADAMTS13Q76LX8 1427 aa18.26■□□□□ 0.51
LINC01257-201ENST00000376678 PDE4AP27815 886 aa18.26■□□□□ 0.51
LINC01257-201ENST00000376678 STK26Q9P289 416 aa18.26■□□□□ 0.51
LINC01257-201ENST00000376678 ADGRB1O14514 1584 aa18.25■□□□□ 0.51
LINC01257-201ENST00000376678 NPHP4O75161 1426 aaPredicted RBP18.25■□□□□ 0.51
LINC01257-201ENST00000376678 TRAK1Q9UPV9 953 aa18.25■□□□□ 0.51
LINC01257-201ENST00000376678 ASXL1Q8IXJ9 1541 aa18.24■□□□□ 0.51
LINC01257-201ENST00000376678 METP08581 1390 aa18.24■□□□□ 0.51
LINC01257-201ENST00000376678 RTL5Q5HYW3 569 aaPredicted RBP18.24■□□□□ 0.51
LINC01257-201ENST00000376678 TESK2Q96S53 571 aa18.23■□□□□ 0.51
LINC01257-201ENST00000376678 SETD1AO15047 1707 aaKnown RBP18.22■□□□□ 0.51
LINC01257-201ENST00000376678 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
LINC01257-201ENST00000376678 TBX22Q9Y458 520 aa18.22■□□□□ 0.51
LINC01257-201ENST00000376678 CDCA7LQ96GN5 454 aa18.21■□□□□ 0.51
LINC01257-201ENST00000376678 DISP3Q9P2K9 1392 aa18.21■□□□□ 0.51
LINC01257-201ENST00000376678 MED14O60244 1454 aa18.21■□□□□ 0.51
LINC01257-201ENST00000376678 YTHDC2Q9H6S0 1430 aaKnown RBP18.21■□□□□ 0.51
LINC01257-201ENST00000376678 IL27Q8NEV9 243 aa18.2■□□□□ 0.5
LINC01257-201ENST00000376678 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.2■□□□□ 0.5
LINC01257-201ENST00000376678 EIF3AQ14152 1382 aaKnown RBP18.2■□□□□ 0.5
LINC01257-201ENST00000376678 DIP2AQ14689 1571 aa18.19■□□□□ 0.5
LINC01257-201ENST00000376678 USP35Q9P2H5 1018 aa18.17■□□□□ 0.5
LINC01257-201ENST00000376678 SAFB2Q14151 953 aaKnown RBP eCLIP18.16■□□□□ 0.5
LINC01257-201ENST00000376678 STRCQ7RTU9 1775 aa18.15■□□□□ 0.5
LINC01257-201ENST00000376678 AMOTL2Q9Y2J4 779 aa18.15■□□□□ 0.5
LINC01257-201ENST00000376678 PTPRUQ92729 1446 aa18.15■□□□□ 0.5
LINC01257-201ENST00000376678 PANK3Q9H999 370 aa18.14■□□□□ 0.5
LINC01257-201ENST00000376678 POGKQ9P215 609 aa18.14■□□□□ 0.5
LINC01257-201ENST00000376678 CENPJQ9HC77 1338 aaPredicted RBP18.14■□□□□ 0.49
LINC01257-201ENST00000376678 NPM2Q86SE8 214 aaKnown RBP18.14■□□□□ 0.49
LINC01257-201ENST00000376678 PRAM1Q96QH2 718 aa18.14■□□□□ 0.49
LINC01257-201ENST00000376678 CRBNQ96SW2 442 aa18.13■□□□□ 0.49
LINC01257-201ENST00000376678 ABCC11Q96J66 1382 aa18.13■□□□□ 0.49
LINC01257-201ENST00000376678 CC2D1BQ5T0F9 858 aaKnown RBP18.13■□□□□ 0.49
LINC01257-201ENST00000376678 ARHGEF28Q8N1W1 1705 aaKnown RBP18.13■□□□□ 0.49
LINC01257-201ENST00000376678 PIK3R4Q99570 1358 aa18.12■□□□□ 0.49
LINC01257-201ENST00000376678 TMF1P82094 1093 aa18.12■□□□□ 0.49
LINC01257-201ENST00000376678 WAPLQ7Z5K2 1190 aa18.12■□□□□ 0.49
LINC01257-201ENST00000376678 PLIN1O60240 522 aa18.11■□□□□ 0.49
LINC01257-201ENST00000376678 KDM2BQ8NHM5 1336 aa18.11■□□□□ 0.49
LINC01257-201ENST00000376678 KCNA6P17658 529 aa18.11■□□□□ 0.49
LINC01257-201ENST00000376678 RTN4Q9NQC3 1192 aaKnown RBP18.11■□□□□ 0.49
LINC01257-201ENST00000376678 PPM1GO15355 546 aaPredicted RBP18.1■□□□□ 0.49
LINC01257-201ENST00000376678 ROBO2Q9HCK4 1378 aa18.09■□□□□ 0.49
LINC01257-201ENST00000376678 PLEKHH1Q9ULM0 1364 aa18.09■□□□□ 0.49
LINC01257-201ENST00000376678 DLC1Q96QB1 1528 aa18.09■□□□□ 0.49
LINC01257-201ENST00000376678 TECPR2O15040 1411 aa18.09■□□□□ 0.49
LINC01257-201ENST00000376678 KNDC1Q76NI1 1749 aa18.09■□□□□ 0.49
LINC01257-201ENST00000376678 DDRGK1Q96HY6 314 aa18.08■□□□□ 0.49
LINC01257-201ENST00000376678 CPS1P31327 1500 aa18.08■□□□□ 0.48
LINC01257-201ENST00000376678 QRICH2Q9H0J4 1663 aa18.08■□□□□ 0.48
LINC01257-201ENST00000376678 MINK1Q8N4C8 1332 aaPredicted RBP18.07■□□□□ 0.48
LINC01257-201ENST00000376678 ZNF521Q96K83 1311 aa18.07■□□□□ 0.48
LINC01257-201ENST00000376678 DMRT2Q9Y5R5 561 aa18.07■□□□□ 0.48
LINC01257-201ENST00000376678 XRN1Q8IZH2 1706 aaKnown RBP18.07■□□□□ 0.48
LINC01257-201ENST00000376678 EIF5BO60841 1220 aaKnown RBP18.07■□□□□ 0.48
LINC01257-201ENST00000376678 CHD2O14647 1828 aaKnown RBP18.06■□□□□ 0.48
LINC01257-201ENST00000376678 NEFMP07197 916 aa18.06■□□□□ 0.48
LINC01257-201ENST00000376678 FAM135BQ49AJ0 1406 aa18.06■□□□□ 0.48
LINC01257-201ENST00000376678 ADAMTS8Q9UP79 889 aa18.06■□□□□ 0.48
LINC01257-201ENST00000376678 PTCH1Q13635 1447 aa18.05■□□□□ 0.48
LINC01257-201ENST00000376678 LAS1LQ9Y4W2 734 aaKnown RBP18.05■□□□□ 0.48
LINC01257-201ENST00000376678 DUSP27Q5VZP5 1158 aa18.05■□□□□ 0.48
LINC01257-201ENST00000376678 SIRT1Q96EB6 747 aa18.05■□□□□ 0.48
LINC01257-201ENST00000376678 C20orf194Q5TEA3 1177 aa18.04■□□□□ 0.48
LINC01257-201ENST00000376678 RBM33Q96EV2 1170 aaKnown RBP18.04■□□□□ 0.48
LINC01257-201ENST00000376678 SBNO2Q9Y2G9 1366 aa18.03■□□□□ 0.48
LINC01257-201ENST00000376678 CENPQQ7L2Z9 268 aaPredicted RBP18.03■□□□□ 0.48
LINC01257-201ENST00000376678 PKNOX2Q96KN3 472 aa18.03■□□□□ 0.48
LINC01257-201ENST00000376678 PPP2R1AP30153 589 aa18.03■□□□□ 0.48
LINC01257-201ENST00000376678 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
LINC01257-201ENST00000376678 NWD1Q149M9 1564 aa18.02■□□□□ 0.47
LINC01257-201ENST00000376678 AMER1Q5JTC6 1135 aaPredicted RBP18.01■□□□□ 0.47
LINC01257-201ENST00000376678 ZNF335Q9H4Z2 1342 aaPredicted RBP18.01■□□□□ 0.47
LINC01257-201ENST00000376678 SKAP1Q86WV1 359 aa18.01■□□□□ 0.47
LINC01257-201ENST00000376678 NPC1L1Q9UHC9 1359 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms