RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 LAMC1P11047 1609 aa20.08■□□□□ 0.81
CCHCR1-201ENST00000376266 STRCQ7RTU9 1775 aa20.08■□□□□ 0.81
CCHCR1-201ENST00000376266 ADGRB1O14514 1584 aa20.08■□□□□ 0.81
CCHCR1-201ENST00000376266 TBX22Q9Y458 520 aa20.08■□□□□ 0.8
CCHCR1-201ENST00000376266 ASXL1Q8IXJ9 1541 aa20.08■□□□□ 0.8
CCHCR1-201ENST00000376266 SETD1AO15047 1707 aaKnown RBP20.08■□□□□ 0.8
CCHCR1-201ENST00000376266 STK26Q9P289 416 aa20.07■□□□□ 0.8
CCHCR1-201ENST00000376266 TRAK1Q9UPV9 953 aa20.05■□□□□ 0.8
CCHCR1-201ENST00000376266 USP47Q96K76 1375 aa20.03■□□□□ 0.8
CCHCR1-201ENST00000376266 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.03■□□□□ 0.8
CCHCR1-201ENST00000376266 YTHDC2Q9H6S0 1430 aaKnown RBP20.03■□□□□ 0.8
CCHCR1-201ENST00000376266 DIP2AQ14689 1571 aa20.02■□□□□ 0.8
CCHCR1-201ENST00000376266 SMG6Q86US8 1419 aaKnown RBP20.02■□□□□ 0.79
CCHCR1-201ENST00000376266 PTPRUQ92729 1446 aa20■□□□□ 0.79
CCHCR1-201ENST00000376266 CCDC7Q96M83 1385 aa20■□□□□ 0.79
CCHCR1-201ENST00000376266 C11orf95C9JLR9 678 aaPredicted RBP20■□□□□ 0.79
CCHCR1-201ENST00000376266 NPM2Q86SE8 214 aaKnown RBP20■□□□□ 0.79
CCHCR1-201ENST00000376266 NEFMP07197 916 aa19.99■□□□□ 0.79
CCHCR1-201ENST00000376266 NUDCQ9Y266 331 aa19.99■□□□□ 0.79
CCHCR1-201ENST00000376266 AMOTL2Q9Y2J4 779 aa19.99■□□□□ 0.79
CCHCR1-201ENST00000376266 LRPPRCP42704 1394 aaKnown RBP19.99■□□□□ 0.79
CCHCR1-201ENST00000376266 ST20-MTHFSA0A0A6YYL1 179 aa19.98■□□□□ 0.79
CCHCR1-201ENST00000376266 USP35Q9P2H5 1018 aa19.97■□□□□ 0.79
CCHCR1-201ENST00000376266 LAS1LQ9Y4W2 734 aaKnown RBP19.97■□□□□ 0.79
CCHCR1-201ENST00000376266 RNF123Q5XPI4 1314 aa19.97■□□□□ 0.79
CCHCR1-201ENST00000376266 ABCC11Q96J66 1382 aa19.97■□□□□ 0.79
CCHCR1-201ENST00000376266 PIK3R4Q99570 1358 aa19.97■□□□□ 0.79
CCHCR1-201ENST00000376266 KCNA6P17658 529 aa19.95■□□□□ 0.78
CCHCR1-201ENST00000376266 SAFB2Q14151 953 aaKnown RBP eCLIP19.95■□□□□ 0.78
CCHCR1-201ENST00000376266 DMRT2Q9Y5R5 561 aa19.95■□□□□ 0.78
CCHCR1-201ENST00000376266 WAPLQ7Z5K2 1190 aa19.95■□□□□ 0.78
CCHCR1-201ENST00000376266 PRAM1Q96QH2 718 aa19.94■□□□□ 0.78
CCHCR1-201ENST00000376266 EIF3AQ14152 1382 aaKnown RBP19.94■□□□□ 0.78
CCHCR1-201ENST00000376266 ROBO2Q9HCK4 1378 aa19.93■□□□□ 0.78
CCHCR1-201ENST00000376266 CHD2O14647 1828 aaKnown RBP19.93■□□□□ 0.78
CCHCR1-201ENST00000376266 ARHGEF28Q8N1W1 1705 aaKnown RBP19.92■□□□□ 0.78
CCHCR1-201ENST00000376266 POGKQ9P215 609 aa19.92■□□□□ 0.78
CCHCR1-201ENST00000376266 TECPR2O15040 1411 aa19.92■□□□□ 0.78
CCHCR1-201ENST00000376266 PLEKHH1Q9ULM0 1364 aa19.92■□□□□ 0.78
CCHCR1-201ENST00000376266 CENPJQ9HC77 1338 aaPredicted RBP19.92■□□□□ 0.78
CCHCR1-201ENST00000376266 XRN1Q8IZH2 1706 aaKnown RBP19.9■□□□□ 0.78
CCHCR1-201ENST00000376266 RBM33Q96EV2 1170 aaKnown RBP19.89■□□□□ 0.78
CCHCR1-201ENST00000376266 TESK2Q96S53 571 aa19.89■□□□□ 0.78
CCHCR1-201ENST00000376266 DLC1Q96QB1 1528 aa19.89■□□□□ 0.78
CCHCR1-201ENST00000376266 ZNF335Q9H4Z2 1342 aaPredicted RBP19.89■□□□□ 0.77
CCHCR1-201ENST00000376266 KNDC1Q76NI1 1749 aa19.89■□□□□ 0.77
CCHCR1-201ENST00000376266 CPS1P31327 1500 aa19.89■□□□□ 0.77
CCHCR1-201ENST00000376266 PPM1GO15355 546 aaPredicted RBP19.89■□□□□ 0.77
CCHCR1-201ENST00000376266 UBE2Q2Q8WVN8 375 aa19.89■□□□□ 0.77
CCHCR1-201ENST00000376266 SIRT1Q96EB6 747 aa19.88■□□□□ 0.77
CCHCR1-201ENST00000376266 CNGB1Q14028 1251 aaPredicted RBP19.87■□□□□ 0.77
CCHCR1-201ENST00000376266 PTCH1Q13635 1447 aa19.87■□□□□ 0.77
CCHCR1-201ENST00000376266 FAM135BQ49AJ0 1406 aa19.87■□□□□ 0.77
CCHCR1-201ENST00000376266 STRCP1A6NGW2 1772 aa19.86■□□□□ 0.77
CCHCR1-201ENST00000376266 KIF7Q2M1P5 1343 aa19.86■□□□□ 0.77
CCHCR1-201ENST00000376266 MINK1Q8N4C8 1332 aaPredicted RBP19.86■□□□□ 0.77
CCHCR1-201ENST00000376266 NWD1Q149M9 1564 aa19.86■□□□□ 0.77
CCHCR1-201ENST00000376266 TCERG1O14776 1098 aaKnown RBP19.86■□□□□ 0.77
CCHCR1-201ENST00000376266 QRICH2Q9H0J4 1663 aa19.85■□□□□ 0.77
CCHCR1-201ENST00000376266 PDE4AP27815 886 aa19.84■□□□□ 0.77
CCHCR1-201ENST00000376266 PROSER2Q86WR7 435 aaPredicted RBP19.84■□□□□ 0.77
CCHCR1-201ENST00000376266 SENP3-EIF4A1A0A087X0R7 540 aa19.84■□□□□ 0.77
CCHCR1-201ENST00000376266 DISP3Q9P2K9 1392 aa19.82■□□□□ 0.76
CCHCR1-201ENST00000376266 BRPF3Q9ULD4 1205 aa19.81■□□□□ 0.76
CCHCR1-201ENST00000376266 NKTRP30414 1462 aaKnown RBP19.81■□□□□ 0.76
CCHCR1-201ENST00000376266 SBNO2Q9Y2G9 1366 aa19.81■□□□□ 0.76
CCHCR1-201ENST00000376266 TMF1P82094 1093 aa19.8■□□□□ 0.76
CCHCR1-201ENST00000376266 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.8■□□□□ 0.76
CCHCR1-201ENST00000376266 POLR3GLQ9BT43 218 aa19.79■□□□□ 0.76
CCHCR1-201ENST00000376266 BACH2Q9BYV9 841 aa19.79■□□□□ 0.76
CCHCR1-201ENST00000376266 C14orf37Q86TY3 774 aa19.78■□□□□ 0.76
CCHCR1-201ENST00000376266 TMEM94Q12767 1356 aa19.78■□□□□ 0.76
CCHCR1-201ENST00000376266 EIF5BO60841 1220 aaKnown RBP19.78■□□□□ 0.76
CCHCR1-201ENST00000376266 GSE1Q14687 1217 aa19.77■□□□□ 0.76
CCHCR1-201ENST00000376266 EVC2Q86UK5 1308 aa19.76■□□□□ 0.75
CCHCR1-201ENST00000376266 TULP4Q9NRJ4 1543 aa19.76■□□□□ 0.75
CCHCR1-201ENST00000376266 EXOC6Q8TAG9 804 aa19.76■□□□□ 0.75
CCHCR1-201ENST00000376266 SLC24A1O60721 1099 aa19.75■□□□□ 0.75
CCHCR1-201ENST00000376266 CDK19Q9BWU1 502 aa19.75■□□□□ 0.75
CCHCR1-201ENST00000376266 MS4A1P11836 297 aa19.75■□□□□ 0.75
CCHCR1-201ENST00000376266 CABP2Q9NPB3 220 aa19.75■□□□□ 0.75
CCHCR1-201ENST00000376266 LRRC7Q96NW7 1537 aa19.75■□□□□ 0.75
CCHCR1-201ENST00000376266 WASLO00401 505 aaPredicted RBP19.74■□□□□ 0.75
CCHCR1-201ENST00000376266 SRPK2P78362 688 aaKnown RBP19.74■□□□□ 0.75
CCHCR1-201ENST00000376266 NALCNQ8IZF0 1738 aa19.73■□□□□ 0.75
CCHCR1-201ENST00000376266 RRP1P56182 461 aaKnown RBP19.73■□□□□ 0.75
CCHCR1-201ENST00000376266 ADGRL3Q9HAR2 1447 aa19.73■□□□□ 0.75
CCHCR1-201ENST00000376266 NUTM2FA1L443 756 aa19.72■□□□□ 0.75
CCHCR1-201ENST00000376266 TMC1Q8TDI8 760 aa19.72■□□□□ 0.75
CCHCR1-201ENST00000376266 DDRGK1Q96HY6 314 aa19.72■□□□□ 0.75
CCHCR1-201ENST00000376266 PNISRQ8TF01 805 aaKnown RBP19.71■□□□□ 0.75
CCHCR1-201ENST00000376266 LTBP4Q8N2S1 1624 aa19.71■□□□□ 0.75
CCHCR1-201ENST00000376266 CDCA8Q53HL2 280 aa19.71■□□□□ 0.75
CCHCR1-201ENST00000376266 C19orf44Q9H6X5 657 aa19.71■□□□□ 0.75
CCHCR1-201ENST00000376266 ADGRB2O60241 1585 aa19.7■□□□□ 0.74
CCHCR1-201ENST00000376266 XIRP1Q702N8 1843 aaKnown RBP19.69■□□□□ 0.74
CCHCR1-201ENST00000376266 NCOA3Q9Y6Q9 1424 aa19.68■□□□□ 0.74
CCHCR1-201ENST00000376266 NFKBIBQ15653 356 aa19.67■□□□□ 0.74
CCHCR1-201ENST00000376266 PRR36Q9H6K5 1346 aa19.66■□□□□ 0.74
CCHCR1-201ENST00000376266 NUDT16Q96DE0 195 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms