RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 E9PSI1 815 aa7.11□□□□□ -1.27
SCN2A-202ENST00000375427 CHMP4AQ9BY43 222 aa7.11□□□□□ -1.27
SCN2A-202ENST00000375427 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.11□□□□□ -1.27
SCN2A-202ENST00000375427 EPB41L2O43491 1005 aaKnown RBP7.11□□□□□ -1.27
SCN2A-202ENST00000375427 PAXIP1Q6ZW49 1069 aaPredicted RBP7.11□□□□□ -1.27
SCN2A-202ENST00000375427 FAM161AQ3B820 660 aa7.11□□□□□ -1.27
SCN2A-202ENST00000375427 CFAP58Q5T655 872 aa7.11□□□□□ -1.27
SCN2A-202ENST00000375427 TTC36A6NLP5 189 aa7.11□□□□□ -1.27
SCN2A-202ENST00000375427 NUP133Q8WUM0 1156 aa7.11□□□□□ -1.27
SCN2A-202ENST00000375427 PUS7Q96PZ0 661 aaKnown RBP7.11□□□□□ -1.27
SCN2A-202ENST00000375427 PPP1R12BO60237 982 aaPredicted RBP7.1□□□□□ -1.27
SCN2A-202ENST00000375427 KLHL34Q8N239 644 aa7.1□□□□□ -1.27
SCN2A-202ENST00000375427 TMF1P82094 1093 aa7.1□□□□□ -1.27
SCN2A-202ENST00000375427 PRR16Q569H4 304 aa7.1□□□□□ -1.27
SCN2A-202ENST00000375427 VCX3BQ9H321 246 aa7.1□□□□□ -1.27
SCN2A-202ENST00000375427 CGNQ9P2M7 1197 aaKnown RBP7.1□□□□□ -1.27
SCN2A-202ENST00000375427 ZRANB2O95218 330 aaKnown RBP eCLIP7.1□□□□□ -1.27
SCN2A-202ENST00000375427 MPHOSPH6Q99547 160 aaKnown RBP7.1□□□□□ -1.27
SCN2A-202ENST00000375427 GBP3Q9H0R5 595 aa7.1□□□□□ -1.27
SCN2A-202ENST00000375427 RABGAP1Q9Y3P9 1069 aa7.1□□□□□ -1.27
SCN2A-202ENST00000375427 TONSLQ96HA7 1378 aa7.1□□□□□ -1.27
SCN2A-202ENST00000375427 DHX8Q14562 1220 aaKnown RBP7.1□□□□□ -1.27
SCN2A-202ENST00000375427 CEP135Q66GS9 1140 aa7.1□□□□□ -1.27
SCN2A-202ENST00000375427 CSRNP3Q8WYN3 585 aa7.1□□□□□ -1.27
SCN2A-202ENST00000375427 PRPF40AO75400 957 aaKnown RBP7.1□□□□□ -1.27
SCN2A-202ENST00000375427 LUC7LQ9NQ29 371 aaKnown RBP7.1□□□□□ -1.27
SCN2A-202ENST00000375427 MAPK8IP3Q9UPT6 1336 aa7.1□□□□□ -1.27
SCN2A-202ENST00000375427 DNAAF4Q8WXU2 420 aa7.09□□□□□ -1.27
SCN2A-202ENST00000375427 ERICH4A6NGS2 130 aa7.09□□□□□ -1.27
SCN2A-202ENST00000375427 MRE11P49959 708 aa7.09□□□□□ -1.27
SCN2A-202ENST00000375427 RPUSD2Q8IZ73 545 aaKnown RBP7.09□□□□□ -1.27
SCN2A-202ENST00000375427 SLKQ9H2G2 1235 aaPredicted RBP7.09□□□□□ -1.27
SCN2A-202ENST00000375427 SMARCC1Q92922 1105 aaPredicted RBP7.09□□□□□ -1.27
SCN2A-202ENST00000375427 GPATCH3Q96I76 525 aa7.09□□□□□ -1.27
SCN2A-202ENST00000375427 NAT10Q9H0A0 1025 aaKnown RBP7.09□□□□□ -1.27
SCN2A-202ENST00000375427 R3HCC1Q9Y3T6 440 aaKnown RBP7.09□□□□□ -1.27
SCN2A-202ENST00000375427 TACC1O75410 805 aa7.09□□□□□ -1.27
SCN2A-202ENST00000375427 ST18O60284 1047 aa7.09□□□□□ -1.28
SCN2A-202ENST00000375427 TMCO3Q6UWJ1 677 aa7.09□□□□□ -1.28
SCN2A-202ENST00000375427 ESF1Q9H501 851 aaKnown RBP7.09□□□□□ -1.28
SCN2A-202ENST00000375427 U2SURPO15042 1029 aaKnown RBP7.08□□□□□ -1.28
SCN2A-202ENST00000375427 MGEA5O60502 916 aa7.08□□□□□ -1.28
SCN2A-202ENST00000375427 TXLNAP40222 546 aa7.08□□□□□ -1.28
SCN2A-202ENST00000375427 VCXQ9H320 206 aa7.08□□□□□ -1.28
SCN2A-202ENST00000375427 USH1CQ9Y6N9 552 aa7.08□□□□□ -1.28
SCN2A-202ENST00000375427 KLHL10Q6JEL2 608 aa7.08□□□□□ -1.28
SCN2A-202ENST00000375427 MKRN1Q9UHC7 482 aaKnown RBP7.08□□□□□ -1.28
SCN2A-202ENST00000375427 H3BQV1 296 aa7.08□□□□□ -1.28
SCN2A-202ENST00000375427 TRIM55Q9BYV6 548 aa7.08□□□□□ -1.28
SCN2A-202ENST00000375427 ERC2O15083 957 aa7.08□□□□□ -1.28
SCN2A-202ENST00000375427 NPM1P06748 294 aaKnown RBP eCLIP7.08□□□□□ -1.28
SCN2A-202ENST00000375427 HSPA5P11021 654 aaKnown RBP7.08□□□□□ -1.28
SCN2A-202ENST00000375427 FAM184AQ8NB25 1140 aa7.08□□□□□ -1.28
SCN2A-202ENST00000375427 TSPYL2Q9H2G4 693 aaPredicted RBP7.08□□□□□ -1.28
SCN2A-202ENST00000375427 IFFO2Q5TF58 517 aa7.08□□□□□ -1.28
SCN2A-202ENST00000375427 KNSTRNQ9Y448 316 aa7.08□□□□□ -1.28
SCN2A-202ENST00000375427 DIAPH1O60610 1272 aaKnown RBP7.08□□□□□ -1.28
SCN2A-202ENST00000375427 CCDC96Q2M329 555 aa7.08□□□□□ -1.28
SCN2A-202ENST00000375427 TRIM29Q14134 588 aa7.07□□□□□ -1.28
SCN2A-202ENST00000375427 SETDB1Q15047 1291 aa7.07□□□□□ -1.28
SCN2A-202ENST00000375427 GFAPP14136 432 aa7.07□□□□□ -1.28
SCN2A-202ENST00000375427 CALCOCO2Q13137 446 aa7.07□□□□□ -1.28
SCN2A-202ENST00000375427 USP6NLQ92738 828 aa7.07□□□□□ -1.28
SCN2A-202ENST00000375427 STAG3Q9UJ98 1225 aa7.07□□□□□ -1.28
SCN2A-202ENST00000375427 MAP7D1Q3KQU3 841 aa7.07□□□□□ -1.28
SCN2A-202ENST00000375427 HDAC5Q9UQL6 1122 aa7.07□□□□□ -1.28
SCN2A-202ENST00000375427 CTAGE6Q86UF2 777 aa7.07□□□□□ -1.28
SCN2A-202ENST00000375427 DDX12PQ92771 950 aa7.06□□□□□ -1.28
SCN2A-202ENST00000375427 SPECC1LQ69YQ0 1117 aa7.06□□□□□ -1.28
SCN2A-202ENST00000375427 NOL8Q76FK4 1167 aaKnown RBP7.06□□□□□ -1.28
SCN2A-202ENST00000375427 CHMP5Q9NZZ3 219 aa7.06□□□□□ -1.28
SCN2A-202ENST00000375427 DYNC1I1O14576 645 aa7.06□□□□□ -1.28
SCN2A-202ENST00000375427 NAA16Q6N069 864 aaPredicted RBP7.06□□□□□ -1.28
SCN2A-202ENST00000375427 FILIP1LQ4L180 1135 aa7.06□□□□□ -1.28
SCN2A-202ENST00000375427 BLVRAP53004 296 aa7.06□□□□□ -1.28
SCN2A-202ENST00000375427 TBC1D10BQ4KMP7 808 aaPredicted RBP7.06□□□□□ -1.28
SCN2A-202ENST00000375427 RSPH3Q86UC2 560 aa7.06□□□□□ -1.28
SCN2A-202ENST00000375427 FERP16591 822 aa7.06□□□□□ -1.28
SCN2A-202ENST00000375427 KIF5CO60282 957 aa7.06□□□□□ -1.28
SCN2A-202ENST00000375427 UBE4AQ14139 1066 aa7.06□□□□□ -1.28
SCN2A-202ENST00000375427 LRRC43Q8N309 656 aa7.06□□□□□ -1.28
SCN2A-202ENST00000375427 WDR63Q8IWG1 891 aa7.05□□□□□ -1.28
SCN2A-202ENST00000375427 FBXW7Q969H0 707 aa7.05□□□□□ -1.28
SCN2A-202ENST00000375427 DDX49Q9Y6V7 483 aaKnown RBP7.05□□□□□ -1.28
SCN2A-202ENST00000375427 CENPQQ7L2Z9 268 aaPredicted RBP7.05□□□□□ -1.28
SCN2A-202ENST00000375427 ATP6V1E1P36543 226 aa7.05□□□□□ -1.28
SCN2A-202ENST00000375427 RAP1GDS1P52306 607 aa7.05□□□□□ -1.28
SCN2A-202ENST00000375427 CEBPZQ03701 1054 aaKnown RBP7.05□□□□□ -1.28
SCN2A-202ENST00000375427 PDE1CQ14123 709 aaPredicted RBP7.05□□□□□ -1.28
SCN2A-202ENST00000375427 CCDC43Q96MW1 224 aaKnown RBP7.05□□□□□ -1.28
SCN2A-202ENST00000375427 CWC25Q9NXE8 425 aaPredicted RBP7.05□□□□□ -1.28
SCN2A-202ENST00000375427 RAI14Q9P0K7 980 aa7.05□□□□□ -1.28
SCN2A-202ENST00000375427 A0A1B0GUA9 196 aa7.05□□□□□ -1.28
SCN2A-202ENST00000375427 BICDL2A1A5D9 508 aa7.05□□□□□ -1.28
SCN2A-202ENST00000375427 PDCD2Q16342 344 aaPredicted RBP7.05□□□□□ -1.28
SCN2A-202ENST00000375427 RBM19Q9Y4C8 960 aaKnown RBP7.05□□□□□ -1.28
SCN2A-202ENST00000375427 RSRC1Q96IZ7 334 aaKnown RBP7.04□□□□□ -1.28
SCN2A-202ENST00000375427 DESP17661 470 aa7.04□□□□□ -1.28
SCN2A-202ENST00000375427 MCM3P25205 808 aa7.04□□□□□ -1.28
SCN2A-202ENST00000375427 CTAGE1Q96RT6 745 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms