RNA–Protein interactions for RNA: ENST00000375300.5

SIK3-201, Transcript of SIK family kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SIK3, Length 6,213 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-201ENST00000375300 C9orf78Q9NZ63 289 aaPredicted RBP19.5■□□□□ 0.71
SIK3-201ENST00000375300 ZNF608Q9ULD9 1512 aaPredicted RBP19.5■□□□□ 0.71
SIK3-201ENST00000375300 TRAK2O60296 914 aa19.5■□□□□ 0.71
SIK3-201ENST00000375300 BCL11BQ9C0K0 894 aaPredicted RBP19.5■□□□□ 0.71
SIK3-201ENST00000375300 SLC12A5Q9H2X9 1139 aa19.5■□□□□ 0.71
SIK3-201ENST00000375300 TSPYL4Q9UJ04 414 aa19.5■□□□□ 0.71
SIK3-201ENST00000375300 TEFQ10587 303 aa19.49■□□□□ 0.71
SIK3-201ENST00000375300 ZNF592Q92610 1267 aa19.49■□□□□ 0.71
SIK3-201ENST00000375300 SUPT6HQ7KZ85 1726 aaKnown RBP19.49■□□□□ 0.71
SIK3-201ENST00000375300 GNAI1P63096 354 aa19.49■□□□□ 0.71
SIK3-201ENST00000375300 NOB1Q9ULX3 412 aaKnown RBP19.49■□□□□ 0.71
SIK3-201ENST00000375300 DAPK1P53355 1430 aa19.49■□□□□ 0.71
SIK3-201ENST00000375300 NAIPQ13075 1403 aa19.48■□□□□ 0.71
SIK3-201ENST00000375300 TROQ12816 1431 aaPredicted RBP19.48■□□□□ 0.71
SIK3-201ENST00000375300 FBXW7Q969H0 707 aa19.48■□□□□ 0.71
SIK3-201ENST00000375300 EPRSP07814 1512 aaKnown RBP19.48■□□□□ 0.71
SIK3-201ENST00000375300 VPS37CA5D8V6 355 aaPredicted RBP19.47■□□□□ 0.71
SIK3-201ENST00000375300 ANO8Q9HCE9 1232 aaPredicted RBP19.47■□□□□ 0.71
SIK3-201ENST00000375300 URB2Q14146 1524 aaKnown RBP19.47■□□□□ 0.71
SIK3-201ENST00000375300 RNF214Q8ND24 703 aa19.47■□□□□ 0.71
SIK3-201ENST00000375300 GOLGA6L19H0YKK7 550 aa19.46■□□□□ 0.71
SIK3-201ENST00000375300 IQGAP2Q13576 1575 aa19.46■□□□□ 0.71
SIK3-201ENST00000375300 CDC45O75419 566 aa19.46■□□□□ 0.71
SIK3-201ENST00000375300 ATP6V1DQ9Y5K8 247 aa19.46■□□□□ 0.71
SIK3-201ENST00000375300 IFIT2P09913 472 aaKnown RBP19.46■□□□□ 0.71
SIK3-201ENST00000375300 FAM43AQ8N2R8 423 aa19.46■□□□□ 0.71
SIK3-201ENST00000375300 RASSF8Q8NHQ8 419 aa19.45■□□□□ 0.7
SIK3-201ENST00000375300 C20orf194Q5TEA3 1177 aa19.45■□□□□ 0.7
SIK3-201ENST00000375300 ABCA10Q8WWZ4 1543 aa19.45■□□□□ 0.7
SIK3-201ENST00000375300 BECN2A8MW95 431 aa19.45■□□□□ 0.7
SIK3-201ENST00000375300 PRKAR2BP31323 418 aa19.45■□□□□ 0.7
SIK3-201ENST00000375300 SLC26A8Q96RN1 970 aa19.44■□□□□ 0.7
SIK3-201ENST00000375300 ERBINQ96RT1 1412 aa19.44■□□□□ 0.7
SIK3-201ENST00000375300 NUCB2P80303 420 aa19.43■□□□□ 0.7
SIK3-201ENST00000375300 ROCK1Q13464 1354 aa19.43■□□□□ 0.7
SIK3-201ENST00000375300 NASPP49321 788 aaPredicted RBP19.43■□□□□ 0.7
SIK3-201ENST00000375300 CAVIN1Q6NZI2 390 aaKnown RBP19.43■□□□□ 0.7
SIK3-201ENST00000375300 LAMC3Q9Y6N6 1575 aa19.42■□□□□ 0.7
SIK3-201ENST00000375300 ESCO1Q5FWF5 840 aa19.42■□□□□ 0.7
SIK3-201ENST00000375300 ZKSCAN1P17029 563 aaPredicted RBP19.42■□□□□ 0.7
SIK3-201ENST00000375300 MRE11P49959 708 aa19.41■□□□□ 0.7
SIK3-201ENST00000375300 BICD2Q8TD16 824 aa19.41■□□□□ 0.7
SIK3-201ENST00000375300 RUFY2Q8WXA3 655 aa19.41■□□□□ 0.7
SIK3-201ENST00000375300 SMC3Q9UQE7 1217 aa19.41■□□□□ 0.7
SIK3-201ENST00000375300 NLRP6P59044 892 aa19.41■□□□□ 0.7
SIK3-201ENST00000375300 PDE3AQ14432 1141 aa19.41■□□□□ 0.7
SIK3-201ENST00000375300 CCAR2Q8N163 923 aaKnown RBP19.4■□□□□ 0.7
SIK3-201ENST00000375300 KIF3AQ9Y496 699 aa19.4■□□□□ 0.7
SIK3-201ENST00000375300 GTF2E1P29083 439 aaPredicted RBP19.4■□□□□ 0.7
SIK3-201ENST00000375300 CCDC27Q2M243 656 aa19.4■□□□□ 0.7
SIK3-201ENST00000375300 R3HCC1Q9Y3T6 440 aaKnown RBP19.4■□□□□ 0.7
SIK3-201ENST00000375300 XPCQ01831 940 aaPredicted RBP19.4■□□□□ 0.7
SIK3-201ENST00000375300 PES1O00541 588 aaKnown RBP19.39■□□□□ 0.7
SIK3-201ENST00000375300 RBM33Q96EV2 1170 aaKnown RBP19.39■□□□□ 0.7
SIK3-201ENST00000375300 ATF3P18847 181 aa19.39■□□□□ 0.69
SIK3-201ENST00000375300 AIMP1Q12904 312 aaKnown RBP19.38■□□□□ 0.69
SIK3-201ENST00000375300 KIAA0586Q9BVV6 1533 aa19.38■□□□□ 0.69
SIK3-201ENST00000375300 ABTB2Q8N961 1025 aa19.38■□□□□ 0.69
SIK3-201ENST00000375300 CDK19Q9BWU1 502 aa19.37■□□□□ 0.69
SIK3-201ENST00000375300 CABP1Q9NZU7 370 aa19.37■□□□□ 0.69
SIK3-201ENST00000375300 PRPF40AO75400 957 aaKnown RBP19.37■□□□□ 0.69
SIK3-201ENST00000375300 NEXNQ0ZGT2 675 aa19.37■□□□□ 0.69
SIK3-201ENST00000375300 AAMPQ13685 434 aa19.37■□□□□ 0.69
SIK3-201ENST00000375300 PDE4CQ08493 712 aa19.36■□□□□ 0.69
SIK3-201ENST00000375300 TWISTNBQ3B726 338 aaPredicted RBP19.36■□□□□ 0.69
SIK3-201ENST00000375300 NLRP2Q9NX02 1062 aa19.36■□□□□ 0.69
SIK3-201ENST00000375300 TTC5Q8N0Z6 440 aa19.36■□□□□ 0.69
SIK3-201ENST00000375300 G3BP1Q13283 466 aaKnown RBP eCLIP19.36■□□□□ 0.69
SIK3-201ENST00000375300 NEK4P51957 841 aa19.35■□□□□ 0.69
SIK3-201ENST00000375300 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.35■□□□□ 0.69
SIK3-201ENST00000375300 NOC3LQ8WTT2 800 aaKnown RBP19.35■□□□□ 0.69
SIK3-201ENST00000375300 TNNT3P45378 269 aaPredicted RBP19.34■□□□□ 0.69
SIK3-201ENST00000375300 STAC3Q96MF2 364 aa19.34■□□□□ 0.69
SIK3-201ENST00000375300 GRIN2AQ12879 1464 aa19.34■□□□□ 0.69
SIK3-201ENST00000375300 UBTFL1P0CB47 393 aaPredicted RBP19.34■□□□□ 0.69
SIK3-201ENST00000375300 MPNDQ8N594 471 aa19.34■□□□□ 0.69
SIK3-201ENST00000375300 CCDC34Q96HJ3 373 aa19.34■□□□□ 0.69
SIK3-201ENST00000375300 CAMSAP2Q08AD1 1489 aa19.34■□□□□ 0.69
SIK3-201ENST00000375300 MVPQ14764 893 aaKnown RBP19.33■□□□□ 0.69
SIK3-201ENST00000375300 PTPN23Q9H3S7 1636 aa19.33■□□□□ 0.68
SIK3-201ENST00000375300 SLFN5Q08AF3 891 aa19.32■□□□□ 0.68
SIK3-201ENST00000375300 MEX3CQ5U5Q3 659 aaKnown RBP19.32■□□□□ 0.68
SIK3-201ENST00000375300 TPD52L1Q16890 204 aaPredicted RBP19.32■□□□□ 0.68
SIK3-201ENST00000375300 APPP05067 770 aa19.32■□□□□ 0.68
SIK3-201ENST00000375300 KDM4AO75164 1064 aa19.32■□□□□ 0.68
SIK3-201ENST00000375300 MAGI1Q96QZ7 1491 aaPredicted RBP19.32■□□□□ 0.68
SIK3-201ENST00000375300 CUL7Q14999 1698 aa19.31■□□□□ 0.68
SIK3-201ENST00000375300 RRS1Q15050 365 aaKnown RBP19.31■□□□□ 0.68
SIK3-201ENST00000375300 MAP4K4O95819 1239 aaPredicted RBP19.31■□□□□ 0.68
SIK3-201ENST00000375300 WWC1Q8IX03 1113 aa19.3■□□□□ 0.68
SIK3-201ENST00000375300 ANKRD30BQ9BXX2 1392 aa19.3■□□□□ 0.68
SIK3-201ENST00000375300 ATF7IPQ6VMQ6 1270 aa19.3■□□□□ 0.68
SIK3-201ENST00000375300 WAPLQ7Z5K2 1190 aa19.3■□□□□ 0.68
SIK3-201ENST00000375300 PROSER2Q86WR7 435 aaPredicted RBP19.3■□□□□ 0.68
SIK3-201ENST00000375300 SURF6O75683 361 aaKnown RBP19.3■□□□□ 0.68
SIK3-201ENST00000375300 AEBP2Q6ZN18 517 aaPredicted RBP19.3■□□□□ 0.68
SIK3-201ENST00000375300 STRN4Q9NRL3 753 aa19.29■□□□□ 0.68
SIK3-201ENST00000375300 IFT57Q9NWB7 429 aa19.29■□□□□ 0.68
SIK3-201ENST00000375300 RNF20Q5VTR2 975 aa19.29■□□□□ 0.68
SIK3-201ENST00000375300 ZNF771Q7L3S4 317 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms