RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 ZBED9Q6R2W3 1325 aa26.22■■□□□ 1.79
NECAB3-202ENST00000375238 MINK1Q8N4C8 1332 aaPredicted RBP26.21■■□□□ 1.79
NECAB3-202ENST00000375238 KNSTRNQ9Y448 316 aa26.21■■□□□ 1.79
NECAB3-202ENST00000375238 KNDC1Q76NI1 1749 aa26.21■■□□□ 1.79
NECAB3-202ENST00000375238 SETD1BQ9UPS6 1966 aaKnown RBP26.2■■□□□ 1.79
NECAB3-202ENST00000375238 CC2D1BQ5T0F9 858 aaKnown RBP26.2■■□□□ 1.78
NECAB3-202ENST00000375238 PARD3Q8TEW0 1356 aa26.19■■□□□ 1.78
NECAB3-202ENST00000375238 PUS7Q96PZ0 661 aaKnown RBP26.18■■□□□ 1.78
NECAB3-202ENST00000375238 MYBBP1AQ9BQG0 1328 aaKnown RBP26.18■■□□□ 1.78
NECAB3-202ENST00000375238 TMC1Q8TDI8 760 aa26.18■■□□□ 1.78
NECAB3-202ENST00000375238 WAPLQ7Z5K2 1190 aa26.17■■□□□ 1.78
NECAB3-202ENST00000375238 CABP2Q9NPB3 220 aa26.16■■□□□ 1.78
NECAB3-202ENST00000375238 TSHZ2Q9NRE2 1034 aa26.16■■□□□ 1.78
NECAB3-202ENST00000375238 MED14O60244 1454 aa26.15■■□□□ 1.78
NECAB3-202ENST00000375238 PLEKHH1Q9ULM0 1364 aa26.15■■□□□ 1.78
NECAB3-202ENST00000375238 SRPK2P78362 688 aaKnown RBP26.15■■□□□ 1.78
NECAB3-202ENST00000375238 SLC26A8Q96RN1 970 aa26.15■■□□□ 1.78
NECAB3-202ENST00000375238 CPS1P31327 1500 aa26.15■■□□□ 1.78
NECAB3-202ENST00000375238 TECPR2O15040 1411 aa26.15■■□□□ 1.78
NECAB3-202ENST00000375238 SLC12A5Q9H2X9 1139 aa26.13■■□□□ 1.77
NECAB3-202ENST00000375238 DIP2AQ14689 1571 aa26.11■■□□□ 1.77
NECAB3-202ENST00000375238 FAM135BQ49AJ0 1406 aa26.11■■□□□ 1.77
NECAB3-202ENST00000375238 AMER1Q5JTC6 1135 aaPredicted RBP26.11■■□□□ 1.77
NECAB3-202ENST00000375238 PNISRQ8TF01 805 aaKnown RBP26.1■■□□□ 1.77
NECAB3-202ENST00000375238 SIRT1Q96EB6 747 aa26.1■■□□□ 1.77
NECAB3-202ENST00000375238 CARD14Q9BXL6 1004 aa26.1■■□□□ 1.77
NECAB3-202ENST00000375238 TBX22Q9Y458 520 aa26.09■■□□□ 1.77
NECAB3-202ENST00000375238 BRD4O60885 1362 aaPredicted RBP26.08■■□□□ 1.77
NECAB3-202ENST00000375238 ATAD2Q6PL18 1390 aa26.08■■□□□ 1.77
NECAB3-202ENST00000375238 CDK19Q9BWU1 502 aa26.08■■□□□ 1.77
NECAB3-202ENST00000375238 NPC1L1Q9UHC9 1359 aa26.07■■□□□ 1.76
NECAB3-202ENST00000375238 NLRP13Q86W25 1043 aa26.06■■□□□ 1.76
NECAB3-202ENST00000375238 ANKLE2Q86XL3 938 aa26.06■■□□□ 1.76
NECAB3-202ENST00000375238 ROBO2Q9HCK4 1378 aa26.06■■□□□ 1.76
NECAB3-202ENST00000375238 NINLQ9Y2I6 1382 aa26.06■■□□□ 1.76
NECAB3-202ENST00000375238 PTPRUQ92729 1446 aa26.05■■□□□ 1.76
NECAB3-202ENST00000375238 NSD3Q9BZ95 1437 aa26.05■■□□□ 1.76
NECAB3-202ENST00000375238 ANKRD36BQ8N2N9 1353 aa26.03■■□□□ 1.76
NECAB3-202ENST00000375238 IRX6P78412 446 aaPredicted RBP26.01■■□□□ 1.75
NECAB3-202ENST00000375238 AMOTL2Q9Y2J4 779 aa26.01■■□□□ 1.75
NECAB3-202ENST00000375238 ERICH6BQ5W0A0 696 aa26■■□□□ 1.75
NECAB3-202ENST00000375238 USP32Q8NFA0 1604 aa25.99■■□□□ 1.75
NECAB3-202ENST00000375238 WASLO00401 505 aaPredicted RBP25.99■■□□□ 1.75
NECAB3-202ENST00000375238 SMG6Q86US8 1419 aaKnown RBP25.99■■□□□ 1.75
NECAB3-202ENST00000375238 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.97■■□□□ 1.75
NECAB3-202ENST00000375238 A0A1W2PP64 1363 aa25.97■■□□□ 1.75
NECAB3-202ENST00000375238 XRN1Q8IZH2 1706 aaKnown RBP25.97■■□□□ 1.75
NECAB3-202ENST00000375238 PPP2R1AP30153 589 aa25.96■■□□□ 1.75
NECAB3-202ENST00000375238 TERF2IPQ9NYB0 399 aa25.96■■□□□ 1.75
NECAB3-202ENST00000375238 PTCH1Q13635 1447 aa25.96■■□□□ 1.75
NECAB3-202ENST00000375238 ADGRB2O60241 1585 aa25.95■■□□□ 1.74
NECAB3-202ENST00000375238 PIK3R4Q99570 1358 aa25.95■■□□□ 1.74
NECAB3-202ENST00000375238 CGNL1Q0VF96 1302 aa25.95■■□□□ 1.74
NECAB3-202ENST00000375238 CABP1Q9NZU7 370 aa25.94■■□□□ 1.74
NECAB3-202ENST00000375238 CD163L1Q9NR16 1453 aa25.93■■□□□ 1.74
NECAB3-202ENST00000375238 HDGFL2Q7Z4V5 671 aaPredicted RBP25.92■■□□□ 1.74
NECAB3-202ENST00000375238 NPHP4O75161 1426 aaPredicted RBP25.91■■□□□ 1.74
NECAB3-202ENST00000375238 NUDCQ9Y266 331 aa25.9■■□□□ 1.74
NECAB3-202ENST00000375238 CHD2O14647 1828 aaKnown RBP25.89■■□□□ 1.74
NECAB3-202ENST00000375238 NUDT16Q96DE0 195 aaKnown RBP25.89■■□□□ 1.74
NECAB3-202ENST00000375238 ATP7BP35670 1465 aa25.89■■□□□ 1.74
NECAB3-202ENST00000375238 PPIP5K1Q6PFW1 1433 aa25.89■■□□□ 1.73
NECAB3-202ENST00000375238 KCNA6P17658 529 aa25.88■■□□□ 1.73
NECAB3-202ENST00000375238 MORC1Q86VD1 984 aa25.88■■□□□ 1.73
NECAB3-202ENST00000375238 NSD2O96028 1365 aa25.87■■□□□ 1.73
NECAB3-202ENST00000375238 PPP4R2Q9NY27 417 aa25.86■■□□□ 1.73
NECAB3-202ENST00000375238 NCKAP5LQ9HCH0 1330 aa25.86■■□□□ 1.73
NECAB3-202ENST00000375238 CCDC61Q9Y6R9 512 aa25.84■■□□□ 1.73
NECAB3-202ENST00000375238 PRR36Q9H6K5 1346 aa25.83■■□□□ 1.73
NECAB3-202ENST00000375238 RNF123Q5XPI4 1314 aa25.83■■□□□ 1.72
NECAB3-202ENST00000375238 CDC42BPGQ6DT37 1551 aa25.82■■□□□ 1.72
NECAB3-202ENST00000375238 ITSN1Q15811 1721 aa25.81■■□□□ 1.72
NECAB3-202ENST00000375238 SENP3-EIF4A1A0A087X0R7 540 aa25.81■■□□□ 1.72
NECAB3-202ENST00000375238 KDM4FA0A1W2PPD8 638 aa25.81■■□□□ 1.72
NECAB3-202ENST00000375238 TNNT2P45379 298 aaPredicted RBP25.81■■□□□ 1.72
NECAB3-202ENST00000375238 KIF20BQ96Q89 1820 aa25.81■■□□□ 1.72
NECAB3-202ENST00000375238 ANKRD26Q9UPS8 1709 aa25.81■■□□□ 1.72
NECAB3-202ENST00000375238 TOPAZ1Q8N9V7 1692 aa25.8■■□□□ 1.72
NECAB3-202ENST00000375238 CPSF1Q10570 1443 aaKnown RBP25.79■■□□□ 1.72
NECAB3-202ENST00000375238 NUTM2FA1L443 756 aa25.78■■□□□ 1.72
NECAB3-202ENST00000375238 AKAP12Q02952 1782 aa25.78■■□□□ 1.72
NECAB3-202ENST00000375238 GGNBP2Q9H3C7 697 aa25.78■■□□□ 1.72
NECAB3-202ENST00000375238 MON2Q7Z3U7 1717 aa25.77■■□□□ 1.72
NECAB3-202ENST00000375238 FYB1O15117 783 aa25.76■■□□□ 1.72
NECAB3-202ENST00000375238 INSRP06213 1382 aa25.75■■□□□ 1.71
NECAB3-202ENST00000375238 WDR43Q15061 677 aaKnown RBP eCLIP25.75■■□□□ 1.71
NECAB3-202ENST00000375238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.75■■□□□ 1.713e-6■□□□□ 9.1
NECAB3-202ENST00000375238 EDC4Q6P2E9 1401 aaKnown RBP25.75■■□□□ 1.71
NECAB3-202ENST00000375238 NALCNQ8IZF0 1738 aa25.74■■□□□ 1.71
NECAB3-202ENST00000375238 RGPD8O14715 1765 aaPredicted RBP25.72■■□□□ 1.71
NECAB3-202ENST00000375238 ZNF692Q9BU19 519 aaPredicted RBP25.71■■□□□ 1.71
NECAB3-202ENST00000375238 RBM19Q9Y4C8 960 aaKnown RBP25.71■■□□□ 1.71
NECAB3-202ENST00000375238 FMN2Q9NZ56 1722 aa25.71■■□□□ 1.71
NECAB3-202ENST00000375238 POLR3AO14802 1390 aaPredicted RBP25.71■■□□□ 1.71
NECAB3-202ENST00000375238 BLMP54132 1417 aaPredicted RBP25.71■■□□□ 1.71
NECAB3-202ENST00000375238 HSPA2P54652 639 aa25.71■■□□□ 1.71
NECAB3-202ENST00000375238 ADAMTS8Q9UP79 889 aa25.71■■□□□ 1.71
NECAB3-202ENST00000375238 NWD1Q149M9 1564 aa25.7■■□□□ 1.71
NECAB3-202ENST00000375238 NKTRP30414 1462 aaKnown RBP25.7■■□□□ 1.7
NECAB3-202ENST00000375238 PLEKHG3A1L390 1219 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms