RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 KDM4AO75164 1064 aa10.99□□□□□ -0.65
PMS1-202ENST00000374826 TULP1O00294 542 aaPredicted RBP10.98□□□□□ -0.65
PMS1-202ENST00000374826 MMP16P51512 607 aa10.98□□□□□ -0.65
PMS1-202ENST00000374826 CRIPAKQ8N1N5 446 aa10.98□□□□□ -0.65
PMS1-202ENST00000374826 MINK1Q8N4C8 1332 aaPredicted RBP10.98□□□□□ -0.65
PMS1-202ENST00000374826 AVPP01185 164 aa10.97□□□□□ -0.65
PMS1-202ENST00000374826 MDM2Q00987 491 aaPredicted RBP10.97□□□□□ -0.65
PMS1-202ENST00000374826 USB1Q9BQ65 265 aaKnown RBP10.96□□□□□ -0.65
PMS1-202ENST00000374826 DACH1Q9UI36 760 aa10.95□□□□□ -0.66
PMS1-202ENST00000374826 USP46P62068 366 aa10.94□□□□□ -0.66
PMS1-202ENST00000374826 TTC24A2A3L6 582 aaPredicted RBP10.93□□□□□ -0.66
PMS1-202ENST00000374826 WNT7AO00755 349 aa10.92□□□□□ -0.66
PMS1-202ENST00000374826 AXIN1O15169 862 aa10.92□□□□□ -0.66
PMS1-202ENST00000374826 DXOO77932 396 aaKnown RBP10.92□□□□□ -0.66
PMS1-202ENST00000374826 TRIM32Q13049 653 aa10.92□□□□□ -0.66
PMS1-202ENST00000374826 CTC1Q2NKJ3 1217 aa10.92□□□□□ -0.66
PMS1-202ENST00000374826 HLA-CQ95604 372 aa10.92□□□□□ -0.66
PMS1-202ENST00000374826 SMCPP49901 116 aaPredicted RBP10.91□□□□□ -0.66
PMS1-202ENST00000374826 SNIP1Q8TAD8 396 aaKnown RBP10.9□□□□□ -0.66
PMS1-202ENST00000374826 CCDC102AQ96A19 550 aa10.9□□□□□ -0.66
PMS1-202ENST00000374826 HOXA2O43364 376 aa10.89□□□□□ -0.67
PMS1-202ENST00000374826 SMPD1P17405 629 aa10.88□□□□□ -0.67
PMS1-202ENST00000374826 GPCPD1Q9NPB8 672 aa10.88□□□□□ -0.67
PMS1-202ENST00000374826 CLCN1P35523 988 aa10.87□□□□□ -0.67
PMS1-202ENST00000374826 TREML4Q6UXN2 200 aa10.87□□□□□ -0.67
PMS1-202ENST00000374826 CCDC24Q8N4L8 307 aa10.87□□□□□ -0.67
PMS1-202ENST00000374826 MRGPRX2Q96LB1 330 aa10.87□□□□□ -0.67
PMS1-202ENST00000374826 FAM217BQ9NTX9 383 aaPredicted RBP10.87□□□□□ -0.67
PMS1-202ENST00000374826 GMPR2Q9P2T1 348 aaKnown RBP10.87□□□□□ -0.67
PMS1-202ENST00000374826 GUCA2AQ02747 115 aa10.85□□□□□ -0.67
PMS1-202ENST00000374826 LCE2AQ5TA79 106 aaPredicted RBP10.85□□□□□ -0.67
PMS1-202ENST00000374826 C11orf95C9JLR9 678 aaPredicted RBP10.84□□□□□ -0.67
PMS1-202ENST00000374826 J3QL48 77 aa10.84□□□□□ -0.67
PMS1-202ENST00000374826 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.84□□□□□ -0.67
PMS1-202ENST00000374826 SYMPKQ92797 1274 aaKnown RBP10.84□□□□□ -0.67
PMS1-202ENST00000374826 RC3H1Q5TC82 1133 aaKnown RBP10.83□□□□□ -0.68
PMS1-202ENST00000374826 NUTM1Q86Y26 1132 aa10.83□□□□□ -0.68
PMS1-202ENST00000374826 KRI1Q8N9T8 703 aaKnown RBP10.83□□□□□ -0.68
PMS1-202ENST00000374826 SKOR1P84550 965 aa10.82□□□□□ -0.68
PMS1-202ENST00000374826 REPIN1Q9BWE0 567 aaKnown RBP10.82□□□□□ -0.68
PMS1-202ENST00000374826 JUNDP17535 347 aa10.81□□□□□ -0.68
PMS1-202ENST00000374826 WNT7BP56706 349 aa10.81□□□□□ -0.68
PMS1-202ENST00000374826 RETREG3Q86VR2 466 aa10.79□□□□□ -0.68
PMS1-202ENST00000374826 HPS1Q92902 700 aa10.78□□□□□ -0.68
PMS1-202ENST00000374826 ATP13A2Q9NQ11 1180 aa10.78□□□□□ -0.68
PMS1-202ENST00000374826 PCDHGC3Q9UN70 934 aa10.78□□□□□ -0.68
PMS1-202ENST00000374826 SSTR3P32745 418 aaPredicted RBP10.77□□□□□ -0.69
PMS1-202ENST00000374826 PTCRAQ6ISU1 281 aaPredicted RBP10.77□□□□□ -0.69
PMS1-202ENST00000374826 FDX1P10109 184 aa10.76□□□□□ -0.69
PMS1-202ENST00000374826 NUDT12Q9BQG2 462 aa10.76□□□□□ -0.69
PMS1-202ENST00000374826 WFS1O76024 890 aa10.75□□□□□ -0.69
PMS1-202ENST00000374826 C6orf229H3BNL8 230 aa10.74□□□□□ -0.69
PMS1-202ENST00000374826 SPIRE2Q8WWL2 714 aa10.74□□□□□ -0.69
PMS1-202ENST00000374826 SNRPBP14678 240 aaKnown RBP10.73□□□□□ -0.69
PMS1-202ENST00000374826 BARGINQ6ZT62 677 aa10.73□□□□□ -0.69
PMS1-202ENST00000374826 SIAH2O43255 324 aa10.72□□□□□ -0.69
PMS1-202ENST00000374826 ALDH1A1P00352 501 aa10.72□□□□□ -0.69
PMS1-202ENST00000374826 NFX1Q12986 1120 aaKnown RBP10.72□□□□□ -0.69
PMS1-202ENST00000374826 SENP2Q9HC62 589 aa10.72□□□□□ -0.69
PMS1-202ENST00000374826 NDUFV2P19404 249 aa10.71□□□□□ -0.69
PMS1-202ENST00000374826 TRIM47Q96LD4 638 aa10.71□□□□□ -0.69
PMS1-202ENST00000374826 ZMYND10O75800 440 aa10.7□□□□□ -0.7
PMS1-202ENST00000374826 MS4A1P11836 297 aa10.7□□□□□ -0.7
PMS1-202ENST00000374826 MOXD2PA6NHM9 499 aa10.69□□□□□ -0.7
PMS1-202ENST00000374826 CCNYL3P0C7X3 344 aa10.69□□□□□ -0.7
PMS1-202ENST00000374826 EVA1BQ9NVM1 165 aa10.69□□□□□ -0.7
PMS1-202ENST00000374826 SH3BP2P78314 561 aa10.68□□□□□ -0.7
PMS1-202ENST00000374826 AMHR2Q16671 573 aa10.68□□□□□ -0.7
PMS1-202ENST00000374826 EHBP1Q8NDI1 1231 aa10.68□□□□□ -0.7
PMS1-202ENST00000374826 TTLL12Q14166 644 aaPredicted RBP10.67□□□□□ -0.7
PMS1-202ENST00000374826 PTPRNQ16849 979 aa10.67□□□□□ -0.7
PMS1-202ENST00000374826 KIFC2Q96AC6 838 aa10.67□□□□□ -0.7
PMS1-202ENST00000374826 ZC3H15Q8WU90 426 aaKnown RBP10.66□□□□□ -0.7
PMS1-202ENST00000374826 TERTO14746 1132 aaKnown RBP10.65□□□□□ -0.7
PMS1-202ENST00000374826 PRR7Q8TB68 274 aa10.65□□□□□ -0.7
PMS1-202ENST00000374826 SPDYE5A6NIY4 337 aa10.64□□□□□ -0.71
PMS1-202ENST00000374826 SLC24A1O60721 1099 aa10.64□□□□□ -0.71
PMS1-202ENST00000374826 KCNH2Q12809 1159 aa10.64□□□□□ -0.71
PMS1-202ENST00000374826 GIGYF2Q6Y7W6 1299 aaKnown RBP10.64□□□□□ -0.71
PMS1-202ENST00000374826 UNC93B1Q9H1C4 597 aa10.64□□□□□ -0.71
PMS1-202ENST00000374826 WASF2Q9Y6W5 498 aa10.64□□□□□ -0.71
PMS1-202ENST00000374826 WIPF1O43516 503 aa10.63□□□□□ -0.71
PMS1-202ENST00000374826 MTMR2Q13614 643 aa10.63□□□□□ -0.71
PMS1-202ENST00000374826 DESI1Q6ICB0 168 aa10.63□□□□□ -0.71
PMS1-202ENST00000374826 BAP1Q92560 729 aa10.63□□□□□ -0.71
PMS1-202ENST00000374826 BEGAINQ9BUH8 593 aa10.63□□□□□ -0.71
PMS1-202ENST00000374826 CAPN5O15484 640 aaPredicted RBP10.61□□□□□ -0.71
PMS1-202ENST00000374826 GJA5P36382 358 aa10.61□□□□□ -0.71
PMS1-202ENST00000374826 LCE2CQ5TA81 110 aa10.6□□□□□ -0.71
PMS1-202ENST00000374826 TBC1D2Q9BYX2 928 aa10.6□□□□□ -0.71
PMS1-202ENST00000374826 LINC01559Q495D7 138 aa10.59□□□□□ -0.71
PMS1-202ENST00000374826 TRIM46Q7Z4K8 759 aa10.59□□□□□ -0.71
PMS1-202ENST00000374826 VARSP26640 1264 aaKnown RBP10.58□□□□□ -0.72
PMS1-202ENST00000374826 DIXDC1Q155Q3 683 aa10.58□□□□□ -0.72
PMS1-202ENST00000374826 ZNF511Q8NB15 262 aa10.58□□□□□ -0.72
PMS1-202ENST00000374826 INSM1Q01101 510 aaPredicted RBP10.57□□□□□ -0.72
PMS1-202ENST00000374826 RSBN1LQ6PCB5 846 aaPredicted RBP10.57□□□□□ -0.72
PMS1-202ENST00000374826 LYPD8Q6UX82 237 aa10.57□□□□□ -0.72
PMS1-202ENST00000374826 MPNDQ8N594 471 aa10.57□□□□□ -0.72
PMS1-202ENST00000374826 PCDHB15Q9Y5E8 787 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms