RNA–Protein interactions for RNA: ENST00000374454.1

PDZD11-202, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZD11, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-202ENST00000374454 USP47Q96K76 1375 aa14.01□□□□□ -0.17
PDZD11-202ENST00000374454 SAFB2Q14151 953 aaKnown RBP eCLIP14.01□□□□□ -0.17
PDZD11-202ENST00000374454 CADPS2Q86UW7 1296 aa14.01□□□□□ -0.17
PDZD11-202ENST00000374454 DCCP43146 1447 aa14□□□□□ -0.17
PDZD11-202ENST00000374454 SBNO2Q9Y2G9 1366 aa14□□□□□ -0.17
PDZD11-202ENST00000374454 ST20-MTHFSA0A0A6YYL1 179 aa14□□□□□ -0.17
PDZD11-202ENST00000374454 ATF3P18847 181 aa14□□□□□ -0.17
PDZD11-202ENST00000374454 EIF4G2P78344 907 aaKnown RBP eCLIP14□□□□□ -0.17
PDZD11-202ENST00000374454 ARHGEF28Q8N1W1 1705 aaKnown RBP14□□□□□ -0.17
PDZD11-202ENST00000374454 XIRP1Q702N8 1843 aaKnown RBP13.99□□□□□ -0.17
PDZD11-202ENST00000374454 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.98□□□□□ -0.17
PDZD11-202ENST00000374454 MINK1Q8N4C8 1332 aaPredicted RBP13.98□□□□□ -0.17
PDZD11-202ENST00000374454 WASLO00401 505 aaPredicted RBP13.98□□□□□ -0.17
PDZD11-202ENST00000374454 TESK2Q96S53 571 aa13.98□□□□□ -0.17
PDZD11-202ENST00000374454 TOM1O60784 492 aa13.97□□□□□ -0.17
PDZD11-202ENST00000374454 HSPA5P11021 654 aaKnown RBP13.96□□□□□ -0.17
PDZD11-202ENST00000374454 HIRIP3Q9BW71 556 aaPredicted RBP13.96□□□□□ -0.17
PDZD11-202ENST00000374454 EVC2Q86UK5 1308 aa13.95□□□□□ -0.18
PDZD11-202ENST00000374454 PUS7Q96PZ0 661 aaKnown RBP13.95□□□□□ -0.18
PDZD11-202ENST00000374454 CDK19Q9BWU1 502 aa13.95□□□□□ -0.18
PDZD11-202ENST00000374454 SLAIN2Q9P270 581 aa13.95□□□□□ -0.18
PDZD11-202ENST00000374454 ADGRB2O60241 1585 aa13.95□□□□□ -0.18
PDZD11-202ENST00000374454 CDC42BPGQ6DT37 1551 aa13.95□□□□□ -0.18
PDZD11-202ENST00000374454 NALCNQ8IZF0 1738 aa13.95□□□□□ -0.18
PDZD11-202ENST00000374454 UBAP1LF5GYI3 381 aa13.94□□□□□ -0.18
PDZD11-202ENST00000374454 QRICH2Q9H0J4 1663 aa13.92□□□□□ -0.18
PDZD11-202ENST00000374454 MST1RQ04912 1400 aa13.92□□□□□ -0.18
PDZD11-202ENST00000374454 TMF1P82094 1093 aa13.92□□□□□ -0.18
PDZD11-202ENST00000374454 ANKARQ7Z5J8 1434 aa13.91□□□□□ -0.18
PDZD11-202ENST00000374454 CDCA8Q53HL2 280 aa13.91□□□□□ -0.18
PDZD11-202ENST00000374454 C1orf167Q5SNV9 1468 aa13.91□□□□□ -0.18
PDZD11-202ENST00000374454 SRPK2P78362 688 aaKnown RBP13.9□□□□□ -0.18
PDZD11-202ENST00000374454 NUDT16Q96DE0 195 aaKnown RBP13.9□□□□□ -0.18
PDZD11-202ENST00000374454 CCDC61Q9Y6R9 512 aa13.9□□□□□ -0.18
PDZD11-202ENST00000374454 TULP4Q9NRJ4 1543 aa13.9□□□□□ -0.19
PDZD11-202ENST00000374454 CABP2Q9NPB3 220 aa13.89□□□□□ -0.19
PDZD11-202ENST00000374454 PRR36Q9H6K5 1346 aa13.89□□□□□ -0.19
PDZD11-202ENST00000374454 NUTM2FA1L443 756 aa13.88□□□□□ -0.19
PDZD11-202ENST00000374454 FMN2Q9NZ56 1722 aa13.87□□□□□ -0.19
PDZD11-202ENST00000374454 ATAD2Q6PL18 1390 aa13.87□□□□□ -0.19
PDZD11-202ENST00000374454 PLEKHG3A1L390 1219 aa13.87□□□□□ -0.19
PDZD11-202ENST00000374454 ESCO1Q5FWF5 840 aa13.87□□□□□ -0.19
PDZD11-202ENST00000374454 BRINP3Q76B58 766 aa13.87□□□□□ -0.19
PDZD11-202ENST00000374454 ORAI2Q96SN7 254 aa13.87□□□□□ -0.19
PDZD11-202ENST00000374454 DISP3Q9P2K9 1392 aa13.86□□□□□ -0.19
PDZD11-202ENST00000374454 PIP4K2BP78356 416 aa13.86□□□□□ -0.19
PDZD11-202ENST00000374454 FBXO41Q8TF61 875 aa13.86□□□□□ -0.19
PDZD11-202ENST00000374454 ATP7BP35670 1465 aa13.86□□□□□ -0.19
PDZD11-202ENST00000374454 PHF8Q9UPP1 1060 aa13.85□□□□□ -0.19
PDZD11-202ENST00000374454 USP32Q8NFA0 1604 aa13.83□□□□□ -0.2
PDZD11-202ENST00000374454 C11orf95C9JLR9 678 aaPredicted RBP13.83□□□□□ -0.2
PDZD11-202ENST00000374454 CABP1Q9NZU7 370 aa13.83□□□□□ -0.2
PDZD11-202ENST00000374454 NINLQ9Y2I6 1382 aa13.83□□□□□ -0.2
PDZD11-202ENST00000374454 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
PDZD11-202ENST00000374454 PPIP5K1Q6PFW1 1433 aa13.81□□□□□ -0.2
PDZD11-202ENST00000374454 FOXO3O43524 673 aa13.81□□□□□ -0.2
PDZD11-202ENST00000374454 PMFBP1Q8TBY8 1022 aa13.81□□□□□ -0.2
PDZD11-202ENST00000374454 NPHP3Q7Z494 1330 aa13.81□□□□□ -0.2
PDZD11-202ENST00000374454 POLR3AO14802 1390 aaPredicted RBP13.81□□□□□ -0.2
PDZD11-202ENST00000374454 NGDNQ8NEJ9 315 aaKnown RBP13.8□□□□□ -0.2
PDZD11-202ENST00000374454 TMC1Q8TDI8 760 aa13.8□□□□□ -0.2
PDZD11-202ENST00000374454 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
PDZD11-202ENST00000374454 SLC12A5Q9H2X9 1139 aa13.8□□□□□ -0.2
PDZD11-202ENST00000374454 ACEP12821 1306 aa13.8□□□□□ -0.2
PDZD11-202ENST00000374454 ROBO1Q9Y6N7 1651 aa13.79□□□□□ -0.2
PDZD11-202ENST00000374454 PSME1Q06323 249 aa13.79□□□□□ -0.2
PDZD11-202ENST00000374454 SOS2Q07890 1332 aaPredicted RBP13.79□□□□□ -0.2
PDZD11-202ENST00000374454 KIF7Q2M1P5 1343 aa13.79□□□□□ -0.2
PDZD11-202ENST00000374454 KIF1AQ12756 1690 aa13.79□□□□□ -0.2
PDZD11-202ENST00000374454 TOPAZ1Q8N9V7 1692 aa13.79□□□□□ -0.2
PDZD11-202ENST00000374454 RGPD8O14715 1765 aaPredicted RBP13.78□□□□□ -0.2
PDZD11-202ENST00000374454 KRT28Q7Z3Y7 464 aa13.78□□□□□ -0.2
PDZD11-202ENST00000374454 TERF2IPQ9NYB0 399 aa13.78□□□□□ -0.2
PDZD11-202ENST00000374454 CCDC7Q96M83 1385 aa13.78□□□□□ -0.2
PDZD11-202ENST00000374454 ITSN1Q15811 1721 aa13.78□□□□□ -0.2
PDZD11-202ENST00000374454 BRD4O60885 1362 aaPredicted RBP13.77□□□□□ -0.21
PDZD11-202ENST00000374454 CPSF1Q10570 1443 aaKnown RBP13.77□□□□□ -0.21
PDZD11-202ENST00000374454 AHDC1Q5TGY3 1603 aaPredicted RBP13.77□□□□□ -0.21
PDZD11-202ENST00000374454 WASHC2AQ641Q2 1341 aa13.77□□□□□ -0.21
PDZD11-202ENST00000374454 DDX17Q92841 729 aaKnown RBP13.77□□□□□ -0.21
PDZD11-202ENST00000374454 HDGFL2Q7Z4V5 671 aaPredicted RBP13.76□□□□□ -0.21
PDZD11-202ENST00000374454 SBNO1A3KN83 1393 aa13.75□□□□□ -0.21
PDZD11-202ENST00000374454 ANKRD36BQ8N2N9 1353 aa13.75□□□□□ -0.21
PDZD11-202ENST00000374454 HSPA1LP34931 641 aa13.75□□□□□ -0.21
PDZD11-202ENST00000374454 LRRC59Q96AG4 307 aaKnown RBP13.75□□□□□ -0.21
PDZD11-202ENST00000374454 POLR3GLQ9BT43 218 aa13.75□□□□□ -0.21
PDZD11-202ENST00000374454 NHSL1Q5SYE7 1610 aa13.75□□□□□ -0.21
PDZD11-202ENST00000374454 PXDNQ92626 1479 aa13.74□□□□□ -0.21
PDZD11-202ENST00000374454 CD163L1Q9NR16 1453 aa13.74□□□□□ -0.21
PDZD11-202ENST00000374454 SSH2Q76I76 1423 aa13.73□□□□□ -0.21
PDZD11-202ENST00000374454 XPCQ01831 940 aaPredicted RBP13.73□□□□□ -0.21
PDZD11-202ENST00000374454 USP6P35125 1406 aa13.73□□□□□ -0.21
PDZD11-202ENST00000374454 A0A1W2PP64 1363 aa13.72□□□□□ -0.21
PDZD11-202ENST00000374454 KTN1Q86UP2 1357 aaKnown RBP13.72□□□□□ -0.21
PDZD11-202ENST00000374454 SPATA31A3Q5VYP0 1347 aa13.72□□□□□ -0.21
PDZD11-202ENST00000374454 ZNF316A6NFI3 1004 aaPredicted RBP13.72□□□□□ -0.21
PDZD11-202ENST00000374454 CARD14Q9BXL6 1004 aa13.71□□□□□ -0.21
PDZD11-202ENST00000374454 PANK3Q9H999 370 aa13.71□□□□□ -0.21
PDZD11-202ENST00000374454 TTC21BQ7Z4L5 1316 aa13.7□□□□□ -0.22
PDZD11-202ENST00000374454 TTC21AQ8NDW8 1320 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms