RNA–Protein interactions for RNA: ENST00000374446.6

ZNF239-202, Transcript of zinc finger protein 239, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF239, Length 2,037 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-202ENST00000374446 PIK3R4Q99570 1358 aa16.55■□□□□ 0.24
ZNF239-202ENST00000374446 NPHP4O75161 1426 aaPredicted RBP16.55■□□□□ 0.24
ZNF239-202ENST00000374446 SRPK2P78362 688 aaKnown RBP16.54■□□□□ 0.24
ZNF239-202ENST00000374446 PRKRIP1Q9H875 184 aaPredicted RBP16.54■□□□□ 0.24
ZNF239-202ENST00000374446 TULP4Q9NRJ4 1543 aa16.53■□□□□ 0.24
ZNF239-202ENST00000374446 CDK19Q9BWU1 502 aa16.53■□□□□ 0.24
ZNF239-202ENST00000374446 CPS1P31327 1500 aa16.52■□□□□ 0.24
ZNF239-202ENST00000374446 TMC1Q8TDI8 760 aa16.52■□□□□ 0.24
ZNF239-202ENST00000374446 KNDC1Q76NI1 1749 aa16.52■□□□□ 0.23
ZNF239-202ENST00000374446 CCER2I3L3R5 266 aa16.52■□□□□ 0.23
ZNF239-202ENST00000374446 HSPA2P54652 639 aa16.51■□□□□ 0.23
ZNF239-202ENST00000374446 CNGB1Q14028 1251 aaPredicted RBP16.51■□□□□ 0.23
ZNF239-202ENST00000374446 SLC12A5Q9H2X9 1139 aa16.51■□□□□ 0.23
ZNF239-202ENST00000374446 WASLO00401 505 aaPredicted RBP16.5■□□□□ 0.23
ZNF239-202ENST00000374446 KCNA6P17658 529 aa16.5■□□□□ 0.23
ZNF239-202ENST00000374446 KNSTRNQ9Y448 316 aa16.5■□□□□ 0.23
ZNF239-202ENST00000374446 PTCH1Q13635 1447 aa16.48■□□□□ 0.23
ZNF239-202ENST00000374446 ATAD2Q6PL18 1390 aa16.48■□□□□ 0.23
ZNF239-202ENST00000374446 LMTK3Q96Q04 1460 aa16.46■□□□□ 0.23
ZNF239-202ENST00000374446 MYOM1P52179 1685 aa16.46■□□□□ 0.23
ZNF239-202ENST00000374446 CARD14Q9BXL6 1004 aa16.46■□□□□ 0.23
ZNF239-202ENST00000374446 NINLQ9Y2I6 1382 aa16.45■□□□□ 0.22
ZNF239-202ENST00000374446 RALBP1Q15311 655 aa16.45■□□□□ 0.22
ZNF239-202ENST00000374446 KTN1Q86UP2 1357 aaKnown RBP16.45■□□□□ 0.22
ZNF239-202ENST00000374446 CC2D1BQ5T0F9 858 aaKnown RBP16.44■□□□□ 0.22
ZNF239-202ENST00000374446 XRN1Q8IZH2 1706 aaKnown RBP16.44■□□□□ 0.22
ZNF239-202ENST00000374446 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
ZNF239-202ENST00000374446 CABP1Q9NZU7 370 aa16.43■□□□□ 0.22
ZNF239-202ENST00000374446 NUDT16Q96DE0 195 aaKnown RBP16.43■□□□□ 0.22
ZNF239-202ENST00000374446 ANKRD36BQ8N2N9 1353 aa16.42■□□□□ 0.22
ZNF239-202ENST00000374446 TERF2IPQ9NYB0 399 aa16.41■□□□□ 0.22
ZNF239-202ENST00000374446 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.41■□□□□ 0.22
ZNF239-202ENST00000374446 CHD2O14647 1828 aaKnown RBP16.41■□□□□ 0.22
ZNF239-202ENST00000374446 CCDC61Q9Y6R9 512 aa16.4■□□□□ 0.22
ZNF239-202ENST00000374446 PARD3Q8TEW0 1356 aa16.4■□□□□ 0.22
ZNF239-202ENST00000374446 NPC1L1Q9UHC9 1359 aa16.4■□□□□ 0.22
ZNF239-202ENST00000374446 ADGRB2O60241 1585 aa16.39■□□□□ 0.21
ZNF239-202ENST00000374446 CCDC184Q52MB2 194 aa16.39■□□□□ 0.21
ZNF239-202ENST00000374446 HDGFL2Q7Z4V5 671 aaPredicted RBP16.39■□□□□ 0.21
ZNF239-202ENST00000374446 MYBBP1AQ9BQG0 1328 aaKnown RBP16.39■□□□□ 0.21
ZNF239-202ENST00000374446 NSD3Q9BZ95 1437 aa16.39■□□□□ 0.21
ZNF239-202ENST00000374446 YTHDC1Q96MU7 727 aaKnown RBP16.38■□□□□ 0.21
ZNF239-202ENST00000374446 A0A1W2PP64 1363 aa16.38■□□□□ 0.21
ZNF239-202ENST00000374446 PRR36Q9H6K5 1346 aa16.38■□□□□ 0.21
ZNF239-202ENST00000374446 MRS2Q9HD23 443 aa16.38■□□□□ 0.21
ZNF239-202ENST00000374446 NUTM2FA1L443 756 aa16.37■□□□□ 0.21
ZNF239-202ENST00000374446 RBM33Q96EV2 1170 aaKnown RBP16.37■□□□□ 0.21
ZNF239-202ENST00000374446 PPIP5K1Q6PFW1 1433 aa16.37■□□□□ 0.21
ZNF239-202ENST00000374446 PROSER2Q86WR7 435 aaPredicted RBP16.36■□□□□ 0.21
ZNF239-202ENST00000374446 CGNL1Q0VF96 1302 aa16.36■□□□□ 0.21
ZNF239-202ENST00000374446 CD163L1Q9NR16 1453 aa16.35■□□□□ 0.21
ZNF239-202ENST00000374446 ATP7BP35670 1465 aa16.34■□□□□ 0.21
ZNF239-202ENST00000374446 NWD1Q149M9 1564 aa16.34■□□□□ 0.21
ZNF239-202ENST00000374446 NLRP13Q86W25 1043 aa16.34■□□□□ 0.21
ZNF239-202ENST00000374446 C14orf37Q86TY3 774 aa16.33■□□□□ 0.21
ZNF239-202ENST00000374446 PLEKHG3A1L390 1219 aa16.33■□□□□ 0.2
ZNF239-202ENST00000374446 CPSF1Q10570 1443 aaKnown RBP16.32■□□□□ 0.2
ZNF239-202ENST00000374446 ZNF692Q9BU19 519 aaPredicted RBP16.32■□□□□ 0.2
ZNF239-202ENST00000374446 BRD4O60885 1362 aaPredicted RBP16.32■□□□□ 0.2
ZNF239-202ENST00000374446 STRCQ7RTU9 1775 aa16.32■□□□□ 0.2
ZNF239-202ENST00000374446 MORC1Q86VD1 984 aa16.31■□□□□ 0.2
ZNF239-202ENST00000374446 NKTRP30414 1462 aaKnown RBP16.31■□□□□ 0.2
ZNF239-202ENST00000374446 ADGRL3Q9HAR2 1447 aa16.31■□□□□ 0.2
ZNF239-202ENST00000374446 PPP2R1AP30153 589 aa16.31■□□□□ 0.2
ZNF239-202ENST00000374446 ANKARQ7Z5J8 1434 aa16.3■□□□□ 0.2
ZNF239-202ENST00000374446 NSD2O96028 1365 aa16.29■□□□□ 0.2
ZNF239-202ENST00000374446 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
ZNF239-202ENST00000374446 ACEP12821 1306 aa16.29■□□□□ 0.2
ZNF239-202ENST00000374446 FYB1O15117 783 aa16.29■□□□□ 0.2
ZNF239-202ENST00000374446 USP32Q8NFA0 1604 aa16.28■□□□□ 0.2
ZNF239-202ENST00000374446 FAM9BQ8IZU0 186 aa16.28■□□□□ 0.2
ZNF239-202ENST00000374446 C19orf44Q9H6X5 657 aa16.28■□□□□ 0.2
ZNF239-202ENST00000374446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.28■□□□□ 0.2
ZNF239-202ENST00000374446 PMFBP1Q8TBY8 1022 aa16.28■□□□□ 0.2
ZNF239-202ENST00000374446 CDC42BPGQ6DT37 1551 aa16.27■□□□□ 0.2
ZNF239-202ENST00000374446 TMEM94Q12767 1356 aa16.27■□□□□ 0.2
ZNF239-202ENST00000374446 PNISRQ8TF01 805 aaKnown RBP16.27■□□□□ 0.2
ZNF239-202ENST00000374446 GGNBP2Q9H3C7 697 aa16.27■□□□□ 0.2
ZNF239-202ENST00000374446 EDC4Q6P2E9 1401 aaKnown RBP16.26■□□□□ 0.19
ZNF239-202ENST00000374446 NGDNQ8NEJ9 315 aaKnown RBP16.26■□□□□ 0.19
ZNF239-202ENST00000374446 NALCNQ8IZF0 1738 aa16.26■□□□□ 0.19
ZNF239-202ENST00000374446 NCOA3Q9Y6Q9 1424 aa16.26■□□□□ 0.19
ZNF239-202ENST00000374446 TNNT2P45379 298 aaPredicted RBP16.25■□□□□ 0.19
ZNF239-202ENST00000374446 ZNF335Q9H4Z2 1342 aaPredicted RBP16.24■□□□□ 0.19
ZNF239-202ENST00000374446 TOPAZ1Q8N9V7 1692 aa16.24■□□□□ 0.19
ZNF239-202ENST00000374446 FMN2Q9NZ56 1722 aa16.24■□□□□ 0.19
ZNF239-202ENST00000374446 POLR3AO14802 1390 aaPredicted RBP16.24■□□□□ 0.19
ZNF239-202ENST00000374446 STRCP1A6NGW2 1772 aa16.23■□□□□ 0.19
ZNF239-202ENST00000374446 ESCO1Q5FWF5 840 aa16.23■□□□□ 0.19
ZNF239-202ENST00000374446 PHF8Q9UPP1 1060 aa16.23■□□□□ 0.19
ZNF239-202ENST00000374446 CENPBP07199 599 aaPredicted RBP16.22■□□□□ 0.19
ZNF239-202ENST00000374446 ATF3P18847 181 aa16.22■□□□□ 0.19
ZNF239-202ENST00000374446 NME9Q86XW9 330 aa16.22■□□□□ 0.19
ZNF239-202ENST00000374446 TTC21BQ7Z4L5 1316 aa16.22■□□□□ 0.19
ZNF239-202ENST00000374446 USP6P35125 1406 aa16.21■□□□□ 0.19
ZNF239-202ENST00000374446 ITSN1Q15811 1721 aa16.2■□□□□ 0.18
ZNF239-202ENST00000374446 AKAP12Q02952 1782 aa16.19■□□□□ 0.18
ZNF239-202ENST00000374446 CADPS2Q86UW7 1296 aa16.19■□□□□ 0.18
ZNF239-202ENST00000374446 COG3Q96JB2 828 aa16.19■□□□□ 0.18
ZNF239-202ENST00000374446 ORAI2Q96SN7 254 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms