RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 NSD3Q9BZ95 1437 aa22.24■■□□□ 1.15
LDLRAP1-201ENST00000374338 ZMYM4Q5VZL5 1548 aa22.23■■□□□ 1.15
LDLRAP1-201ENST00000374338 PNNQ9H307 717 aaKnown RBP22.23■■□□□ 1.15
LDLRAP1-201ENST00000374338 ZNF518AQ6AHZ1 1483 aa22.23■■□□□ 1.15
LDLRAP1-201ENST00000374338 MTHFSP49914 203 aa22.22■■□□□ 1.15
LDLRAP1-201ENST00000374338 C8orf34Q49A92 452 aa22.22■■□□□ 1.15
LDLRAP1-201ENST00000374338 FBLN1P23142 703 aa22.21■■□□□ 1.15
LDLRAP1-201ENST00000374338 C14orf93Q9H972 538 aaKnown RBP22.21■■□□□ 1.15
LDLRAP1-201ENST00000374338 MYOM1P52179 1685 aa22.21■■□□□ 1.15
LDLRAP1-201ENST00000374338 MAP3K4Q9Y6R4 1608 aa22.21■■□□□ 1.15
LDLRAP1-201ENST00000374338 VWDEQ8N2E2 1590 aa22.21■■□□□ 1.15
LDLRAP1-201ENST00000374338 EFCAB6Q5THR3 1501 aa22.21■■□□□ 1.15
LDLRAP1-201ENST00000374338 TNNQ9UQP3 1299 aa22.2■■□□□ 1.15
LDLRAP1-201ENST00000374338 ZNF521Q96K83 1311 aa22.2■■□□□ 1.14
LDLRAP1-201ENST00000374338 MINK1Q8N4C8 1332 aaPredicted RBP22.2■■□□□ 1.14
LDLRAP1-201ENST00000374338 ARAP3Q8WWN8 1544 aa22.19■■□□□ 1.14
LDLRAP1-201ENST00000374338 SRPK2P78362 688 aaKnown RBP22.18■■□□□ 1.14
LDLRAP1-201ENST00000374338 KIF1BO60333 1816 aa22.18■■□□□ 1.14
LDLRAP1-201ENST00000374338 PANK1Q8TE04 598 aa22.18■■□□□ 1.14
LDLRAP1-201ENST00000374338 SYNMO15061 1565 aa22.18■■□□□ 1.14
LDLRAP1-201ENST00000374338 L1TD1Q5T7N2 865 aaKnown RBP22.17■■□□□ 1.14
LDLRAP1-201ENST00000374338 GGNBP2Q9H3C7 697 aa22.17■■□□□ 1.14
LDLRAP1-201ENST00000374338 CLCN1P35523 988 aa22.17■■□□□ 1.14
LDLRAP1-201ENST00000374338 SLKQ9H2G2 1235 aaPredicted RBP22.17■■□□□ 1.14
LDLRAP1-201ENST00000374338 POGZQ7Z3K3 1410 aa22.16■■□□□ 1.14
LDLRAP1-201ENST00000374338 STAC3Q96MF2 364 aa22.16■■□□□ 1.14
LDLRAP1-201ENST00000374338 CANXP27824 592 aaKnown RBP22.16■■□□□ 1.14
LDLRAP1-201ENST00000374338 KDM5AP29375 1690 aaKnown RBP22.15■■□□□ 1.14
LDLRAP1-201ENST00000374338 FAM161AQ3B820 660 aa22.15■■□□□ 1.14
LDLRAP1-201ENST00000374338 CLUAP1Q96AJ1 413 aa22.15■■□□□ 1.14
LDLRAP1-201ENST00000374338 YEATS2Q9ULM3 1422 aa22.15■■□□□ 1.14
LDLRAP1-201ENST00000374338 COG6Q9Y2V7 657 aa22.15■■□□□ 1.14
LDLRAP1-201ENST00000374338 WWC1Q8IX03 1113 aa22.14■■□□□ 1.14
LDLRAP1-201ENST00000374338 FRMPD1Q5SYB0 1578 aa22.14■■□□□ 1.14
LDLRAP1-201ENST00000374338 TCP11L2Q8N4U5 519 aa22.14■■□□□ 1.13
LDLRAP1-201ENST00000374338 KDM2BQ8NHM5 1336 aa22.13■■□□□ 1.13
LDLRAP1-201ENST00000374338 U2SURPO15042 1029 aaKnown RBP22.13■■□□□ 1.13
LDLRAP1-201ENST00000374338 U2AF1L5P0DN76 240 aaPredicted RBP22.13■■□□□ 1.13
LDLRAP1-201ENST00000374338 U2AF1Q01081 240 aaKnown RBP eCLIP22.13■■□□□ 1.13
LDLRAP1-201ENST00000374338 STAG3Q9UJ98 1225 aa22.12■■□□□ 1.13
LDLRAP1-201ENST00000374338 PIK3C2GO75747 1445 aa22.12■■□□□ 1.13
LDLRAP1-201ENST00000374338 MYOM2P54296 1465 aa22.1■■□□□ 1.13
LDLRAP1-201ENST00000374338 PRAM1Q96QH2 718 aa22.09■■□□□ 1.13
LDLRAP1-201ENST00000374338 IGHDP01880 384 aa22.09■■□□□ 1.13
LDLRAP1-201ENST00000374338 FAM69CQ0P6D2 419 aa22.09■■□□□ 1.13
LDLRAP1-201ENST00000374338 VGFO15240 615 aaPredicted RBP22.08■■□□□ 1.12
LDLRAP1-201ENST00000374338 PLPPR3Q6T4P5 718 aa22.08■■□□□ 1.12
LDLRAP1-201ENST00000374338 SEC24BO95487 1268 aa22.07■■□□□ 1.12
LDLRAP1-201ENST00000374338 E9PSI1 815 aa22.07■■□□□ 1.12
LDLRAP1-201ENST00000374338 TSR2Q969E8 191 aaKnown RBP22.07■■□□□ 1.12
LDLRAP1-201ENST00000374338 XRCC6P12956 609 aaKnown RBP eCLIP22.06■■□□□ 1.12
LDLRAP1-201ENST00000374338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.06■■□□□ 1.12
LDLRAP1-201ENST00000374338 ADGRB3O60242 1522 aa22.05■■□□□ 1.12
LDLRAP1-201ENST00000374338 CENPQQ7L2Z9 268 aaPredicted RBP22.05■■□□□ 1.12
LDLRAP1-201ENST00000374338 WAPLQ7Z5K2 1190 aa22.05■■□□□ 1.12
LDLRAP1-201ENST00000374338 SLC24A1O60721 1099 aa22.05■■□□□ 1.12
LDLRAP1-201ENST00000374338 TRMT2AQ8IZ69 625 aaKnown RBP22.05■■□□□ 1.12
LDLRAP1-201ENST00000374338 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.05■■□□□ 1.12
LDLRAP1-201ENST00000374338 SPRYD3Q8NCJ5 442 aa22.05■■□□□ 1.12
LDLRAP1-201ENST00000374338 CGNL1Q0VF96 1302 aa22.04■■□□□ 1.12
LDLRAP1-201ENST00000374338 EVC2Q86UK5 1308 aa22.04■■□□□ 1.12
LDLRAP1-201ENST00000374338 ABCC3O15438 1527 aa22.04■■□□□ 1.12
LDLRAP1-201ENST00000374338 GZF1Q9H116 711 aaPredicted RBP22.03■■□□□ 1.12
LDLRAP1-201ENST00000374338 SIGLEC1Q9BZZ2 1709 aa22.03■■□□□ 1.12
LDLRAP1-201ENST00000374338 RLBP1P12271 317 aa22.02■■□□□ 1.12
LDLRAP1-201ENST00000374338 NKTRP30414 1462 aaKnown RBP22.02■■□□□ 1.11
LDLRAP1-201ENST00000374338 RBM10P98175 930 aaKnown RBP22.01■■□□□ 1.11
LDLRAP1-201ENST00000374338 NPC1L1Q9UHC9 1359 aa22.01■■□□□ 1.11
LDLRAP1-201ENST00000374338 MLH3Q9UHC1 1453 aa22.01■■□□□ 1.11
LDLRAP1-201ENST00000374338 HECW2Q9P2P5 1572 aa22.01■■□□□ 1.11
LDLRAP1-201ENST00000374338 RUNDC1Q96C34 613 aa22.01■■□□□ 1.11
LDLRAP1-201ENST00000374338 PANK2Q9BZ23 570 aa22■■□□□ 1.11
LDLRAP1-201ENST00000374338 NRXN1Q9ULB1 1477 aa22■■□□□ 1.11
LDLRAP1-201ENST00000374338 ADGRB1O14514 1584 aa22■■□□□ 1.11
LDLRAP1-201ENST00000374338 CABP1Q9NZU7 370 aa21.99■■□□□ 1.11
LDLRAP1-201ENST00000374338 IFT172Q9UG01 1749 aa21.99■■□□□ 1.11
LDLRAP1-201ENST00000374338 QRICH2Q9H0J4 1663 aa21.99■■□□□ 1.11
LDLRAP1-201ENST00000374338 A0A0U1RQG5 324 aaPredicted RBP21.99■■□□□ 1.11
LDLRAP1-201ENST00000374338 NCKAP5LQ9HCH0 1330 aa21.98■■□□□ 1.11
LDLRAP1-201ENST00000374338 USP19O94966 1318 aa21.97■■□□□ 1.11
LDLRAP1-201ENST00000374338 A0A1W2PP64 1363 aa21.97■■□□□ 1.11
LDLRAP1-201ENST00000374338 KIAA1210Q9ULL0 1709 aa21.97■■□□□ 1.11
LDLRAP1-201ENST00000374338 GOLGA6L3A6NEY3 463 aa21.96■■□□□ 1.11
LDLRAP1-201ENST00000374338 CFAP53Q96M91 514 aa21.96■■□□□ 1.11
LDLRAP1-201ENST00000374338 POLR3AO14802 1390 aaPredicted RBP21.96■■□□□ 1.11
LDLRAP1-201ENST00000374338 INSRP06213 1382 aa21.96■■□□□ 1.11
LDLRAP1-201ENST00000374338 NUTM2FA1L443 756 aa21.96■■□□□ 1.11
LDLRAP1-201ENST00000374338 FSD2A1L4K1 749 aa21.96■■□□□ 1.11
LDLRAP1-201ENST00000374338 PPLO60437 1756 aa21.95■■□□□ 1.1
LDLRAP1-201ENST00000374338 LMTK2Q8IWU2 1503 aa21.95■■□□□ 1.1
LDLRAP1-201ENST00000374338 PDCL3Q9H2J4 239 aa21.95■■□□□ 1.1
LDLRAP1-201ENST00000374338 PRDM4Q9UKN5 801 aa21.95■■□□□ 1.1
LDLRAP1-201ENST00000374338 RARSP54136 660 aaKnown RBP21.94■■□□□ 1.1
LDLRAP1-201ENST00000374338 CDK19Q9BWU1 502 aa21.94■■□□□ 1.1
LDLRAP1-201ENST00000374338 RPGRIP1LQ68CZ1 1315 aa21.94■■□□□ 1.1
LDLRAP1-201ENST00000374338 TULP4Q9NRJ4 1543 aa21.94■■□□□ 1.1
LDLRAP1-201ENST00000374338 FYB1O15117 783 aa21.93■■□□□ 1.1
LDLRAP1-201ENST00000374338 ZRANB1Q9UGI0 708 aa21.93■■□□□ 1.1
LDLRAP1-201ENST00000374338 GLI2P10070 1586 aa21.93■■□□□ 1.1
LDLRAP1-201ENST00000374338 AAMPQ13685 434 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms