RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 ADAMTS13Q76LX8 1427 aa21.24■□□□□ 0.99
HDAC8-209ENST00000373589 TECPR2O15040 1411 aa21.23■□□□□ 0.99
HDAC8-209ENST00000373589 CABP2Q9NPB3 220 aa21.23■□□□□ 0.99
HDAC8-209ENST00000373589 ADAMTSL3P82987 1691 aa21.23■□□□□ 0.99
HDAC8-209ENST00000373589 MINK1Q8N4C8 1332 aaPredicted RBP21.22■□□□□ 0.99
HDAC8-209ENST00000373589 RIMS1Q86UR5 1692 aaKnown RBP21.22■□□□□ 0.99
HDAC8-209ENST00000373589 PLPPR3Q6T4P5 718 aa21.22■□□□□ 0.99
HDAC8-209ENST00000373589 SIRT1Q96EB6 747 aa21.22■□□□□ 0.99
HDAC8-209ENST00000373589 NINLQ9Y2I6 1382 aa21.22■□□□□ 0.99
HDAC8-209ENST00000373589 ZBED9Q6R2W3 1325 aa21.22■□□□□ 0.99
HDAC8-209ENST00000373589 TXNDC2Q86VQ3 553 aa21.21■□□□□ 0.99
HDAC8-209ENST00000373589 KNDC1Q76NI1 1749 aa21.21■□□□□ 0.99
HDAC8-209ENST00000373589 PPP2R1AP30153 589 aa21.21■□□□□ 0.99
HDAC8-209ENST00000373589 THEMISQ8N1K5 641 aaPredicted RBP21.21■□□□□ 0.99
HDAC8-209ENST00000373589 MED14O60244 1454 aa21.21■□□□□ 0.99
HDAC8-209ENST00000373589 ATAD2Q6PL18 1390 aa21.2■□□□□ 0.98
HDAC8-209ENST00000373589 ANKRD36BQ8N2N9 1353 aa21.2■□□□□ 0.98
HDAC8-209ENST00000373589 PLEKHH1Q9ULM0 1364 aa21.2■□□□□ 0.98
HDAC8-209ENST00000373589 WAPLQ7Z5K2 1190 aa21.2■□□□□ 0.98
HDAC8-209ENST00000373589 EID1Q9Y6B2 187 aa21.2■□□□□ 0.98
HDAC8-209ENST00000373589 FAM135BQ49AJ0 1406 aa21.2■□□□□ 0.98
HDAC8-209ENST00000373589 NSD3Q9BZ95 1437 aa21.2■□□□□ 0.98
HDAC8-209ENST00000373589 SRPK2P78362 688 aaKnown RBP21.18■□□□□ 0.98
HDAC8-209ENST00000373589 USP32Q8NFA0 1604 aa21.18■□□□□ 0.98
HDAC8-209ENST00000373589 CPS1P31327 1500 aa21.18■□□□□ 0.98
HDAC8-209ENST00000373589 BCANQ96GW7 911 aa21.18■□□□□ 0.98
HDAC8-209ENST00000373589 CDK19Q9BWU1 502 aa21.16■□□□□ 0.98
HDAC8-209ENST00000373589 CEP170BQ9Y4F5 1589 aaPredicted RBP21.16■□□□□ 0.98
HDAC8-209ENST00000373589 INSRP06213 1382 aa21.15■□□□□ 0.98
HDAC8-209ENST00000373589 TBX22Q9Y458 520 aa21.12■□□□□ 0.97
HDAC8-209ENST00000373589 A0A1W2PP64 1363 aa21.12■□□□□ 0.97
HDAC8-209ENST00000373589 CD163L1Q9NR16 1453 aa21.12■□□□□ 0.97
HDAC8-209ENST00000373589 CGNL1Q0VF96 1302 aa21.11■□□□□ 0.97
HDAC8-209ENST00000373589 ROBO2Q9HCK4 1378 aa21.1■□□□□ 0.97
HDAC8-209ENST00000373589 PTPRUQ92729 1446 aa21.1■□□□□ 0.97
HDAC8-209ENST00000373589 SLC26A8Q96RN1 970 aa21.09■□□□□ 0.97
HDAC8-209ENST00000373589 ZNF142P52746 1687 aaPredicted RBP21.09■□□□□ 0.97
HDAC8-209ENST00000373589 DIP2AQ14689 1571 aa21.09■□□□□ 0.97
HDAC8-209ENST00000373589 NSD2O96028 1365 aa21.09■□□□□ 0.97
HDAC8-209ENST00000373589 WASLO00401 505 aaPredicted RBP21.09■□□□□ 0.97
HDAC8-209ENST00000373589 TERF2IPQ9NYB0 399 aa21.08■□□□□ 0.97
HDAC8-209ENST00000373589 BLMP54132 1417 aaPredicted RBP21.07■□□□□ 0.96
HDAC8-209ENST00000373589 MORC1Q86VD1 984 aa21.06■□□□□ 0.96
HDAC8-209ENST00000373589 CABP1Q9NZU7 370 aa21.06■□□□□ 0.96
HDAC8-209ENST00000373589 SETD1BQ9UPS6 1966 aaKnown RBP21.05■□□□□ 0.96
HDAC8-209ENST00000373589 ATP7BP35670 1465 aa21.04■□□□□ 0.96
HDAC8-209ENST00000373589 ADGRB2O60241 1585 aa21.04■□□□□ 0.96
HDAC8-209ENST00000373589 HDGFL2Q7Z4V5 671 aaPredicted RBP21.03■□□□□ 0.96
HDAC8-209ENST00000373589 PTCH1Q13635 1447 aa21.02■□□□□ 0.96
HDAC8-209ENST00000373589 ADAMTS8Q9UP79 889 aa21.02■□□□□ 0.96
HDAC8-209ENST00000373589 AMOTL2Q9Y2J4 779 aa21.02■□□□□ 0.96
HDAC8-209ENST00000373589 POLR3AO14802 1390 aaPredicted RBP21.02■□□□□ 0.96
HDAC8-209ENST00000373589 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.02■□□□□ 0.95
HDAC8-209ENST00000373589 PIK3R4Q99570 1358 aa21■□□□□ 0.95
HDAC8-209ENST00000373589 WDR43Q15061 677 aaKnown RBP eCLIP21■□□□□ 0.95
HDAC8-209ENST00000373589 ANKLE2Q86XL3 938 aa21■□□□□ 0.95
HDAC8-209ENST00000373589 NUDT16Q96DE0 195 aaKnown RBP20.99■□□□□ 0.95
HDAC8-209ENST00000373589 CPSF1Q10570 1443 aaKnown RBP20.99■□□□□ 0.95
HDAC8-209ENST00000373589 SMG6Q86US8 1419 aaKnown RBP20.99■□□□□ 0.95
HDAC8-209ENST00000373589 PPIP5K1Q6PFW1 1433 aa20.98■□□□□ 0.95
HDAC8-209ENST00000373589 XRN1Q8IZH2 1706 aaKnown RBP20.98■□□□□ 0.95
HDAC8-209ENST00000373589 FYB1O15117 783 aa20.98■□□□□ 0.95
HDAC8-209ENST00000373589 SUPT16HQ9Y5B9 1047 aaKnown RBP20.98■□□□□ 0.95
HDAC8-209ENST00000373589 CCDC61Q9Y6R9 512 aa20.98■□□□□ 0.95
HDAC8-209ENST00000373589 SENP3-EIF4A1A0A087X0R7 540 aa20.96■□□□□ 0.95
HDAC8-209ENST00000373589 PRR36Q9H6K5 1346 aa20.96■□□□□ 0.95
HDAC8-209ENST00000373589 TNNT2P45379 298 aaPredicted RBP20.95■□□□□ 0.94
HDAC8-209ENST00000373589 ANKRD26Q9UPS8 1709 aa20.95■□□□□ 0.94
HDAC8-209ENST00000373589 CDC42BPGQ6DT37 1551 aa20.94■□□□□ 0.94
HDAC8-209ENST00000373589 GGNBP2Q9H3C7 697 aa20.94■□□□□ 0.94
HDAC8-209ENST00000373589 NUDCQ9Y266 331 aa20.94■□□□□ 0.94
HDAC8-209ENST00000373589 MTHFSP49914 203 aa20.92■□□□□ 0.94
HDAC8-209ENST00000373589 EDC4Q6P2E9 1401 aaKnown RBP20.92■□□□□ 0.94
HDAC8-209ENST00000373589 NCKAP5LQ9HCH0 1330 aa20.92■□□□□ 0.94
HDAC8-209ENST00000373589 PDE3BQ13370 1112 aa20.91■□□□□ 0.94
HDAC8-209ENST00000373589 KIF20BQ96Q89 1820 aa20.91■□□□□ 0.94
HDAC8-209ENST00000373589 NEFLP07196 543 aa20.9■□□□□ 0.94
HDAC8-209ENST00000373589 KCNA6P17658 529 aa20.9■□□□□ 0.94
HDAC8-209ENST00000373589 FKBP8Q14318 412 aa20.9■□□□□ 0.94
HDAC8-209ENST00000373589 TOPAZ1Q8N9V7 1692 aa20.9■□□□□ 0.94
HDAC8-209ENST00000373589 SHPRHQ149N8 1683 aa20.9■□□□□ 0.94
HDAC8-209ENST00000373589 MON2Q7Z3U7 1717 aa20.89■□□□□ 0.93
HDAC8-209ENST00000373589 PLEKHG3A1L390 1219 aa20.88■□□□□ 0.93
HDAC8-209ENST00000373589 ZNF692Q9BU19 519 aaPredicted RBP20.88■□□□□ 0.93
HDAC8-209ENST00000373589 AKAP12Q02952 1782 aa20.88■□□□□ 0.93
HDAC8-209ENST00000373589 CFAP53Q96M91 514 aa20.87■□□□□ 0.93
HDAC8-209ENST00000373589 SALL2Q9Y467 1007 aaPredicted RBP20.87■□□□□ 0.93
HDAC8-209ENST00000373589 CHD2O14647 1828 aaKnown RBP20.87■□□□□ 0.93
HDAC8-209ENST00000373589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.87■□□□□ 0.93
HDAC8-209ENST00000373589 NPHP4O75161 1426 aaPredicted RBP20.86■□□□□ 0.93
HDAC8-209ENST00000373589 ITSN1Q15811 1721 aa20.85■□□□□ 0.93
HDAC8-209ENST00000373589 NKTRP30414 1462 aaKnown RBP20.83■□□□□ 0.93
HDAC8-209ENST00000373589 ZNF521Q96K83 1311 aa20.83■□□□□ 0.93
HDAC8-209ENST00000373589 CCDC146Q8IYE0 955 aa20.83■□□□□ 0.92
HDAC8-209ENST00000373589 COL3A1P02461 1466 aaPredicted RBP20.82■□□□□ 0.92
HDAC8-209ENST00000373589 ACEP12821 1306 aa20.82■□□□□ 0.92
HDAC8-209ENST00000373589 PNPLA6Q8IY17 1366 aa20.81■□□□□ 0.92
HDAC8-209ENST00000373589 NME9Q86XW9 330 aa20.81■□□□□ 0.92
HDAC8-209ENST00000373589 NUTM2FA1L443 756 aa20.81■□□□□ 0.92
HDAC8-209ENST00000373589 NRKQ7Z2Y5 1582 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms