RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 C1orf167Q5SNV9 1468 aa19.65■□□□□ 0.74
HDAC8-204ENST00000373560 PTPN23Q9H3S7 1636 aa19.65■□□□□ 0.74
HDAC8-204ENST00000373560 HRCP23327 699 aa19.64■□□□□ 0.73
HDAC8-204ENST00000373560 SPHKAPQ2M3C7 1700 aa19.64■□□□□ 0.73
HDAC8-204ENST00000373560 CHGAP10645 457 aaKnown RBP19.63■□□□□ 0.73
HDAC8-204ENST00000373560 RALGAPBQ86X10 1494 aa19.62■□□□□ 0.73
HDAC8-204ENST00000373560 E9PCH4 1651 aa19.62■□□□□ 0.73
HDAC8-204ENST00000373560 SOS2Q07890 1332 aaPredicted RBP19.61■□□□□ 0.73
HDAC8-204ENST00000373560 KANK4Q5T7N3 995 aaPredicted RBP19.61■□□□□ 0.73
HDAC8-204ENST00000373560 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.6■□□□□ 0.73
HDAC8-204ENST00000373560 GJD4Q96KN9 370 aaPredicted RBP19.6■□□□□ 0.73
HDAC8-204ENST00000373560 CHIC2Q9UKJ5 165 aa19.59■□□□□ 0.73
HDAC8-204ENST00000373560 METP08581 1390 aa19.58■□□□□ 0.73
HDAC8-204ENST00000373560 HDGFP51858 240 aaKnown RBP19.58■□□□□ 0.72
HDAC8-204ENST00000373560 ORAI2Q96SN7 254 aa19.58■□□□□ 0.72
HDAC8-204ENST00000373560 C1QBPQ07021 282 aaKnown RBP19.57■□□□□ 0.72
HDAC8-204ENST00000373560 YY1P25490 414 aa19.55■□□□□ 0.72
HDAC8-204ENST00000373560 MYCNP04198 464 aaPredicted RBP19.54■□□□□ 0.72
HDAC8-204ENST00000373560 ANKRD30AQ9BXX3 1397 aa19.53■□□□□ 0.72
HDAC8-204ENST00000373560 SLIT2O94813 1529 aa19.52■□□□□ 0.72
HDAC8-204ENST00000373560 IQGAP3Q86VI3 1631 aa19.52■□□□□ 0.72
HDAC8-204ENST00000373560 PXDNQ92626 1479 aa19.52■□□□□ 0.72
HDAC8-204ENST00000373560 CACNB1Q02641 598 aaPredicted RBP19.5■□□□□ 0.71
HDAC8-204ENST00000373560 SF3B2Q13435 895 aaKnown RBP19.5■□□□□ 0.71
HDAC8-204ENST00000373560 ADGRL2O95490 1459 aa19.48■□□□□ 0.71
HDAC8-204ENST00000373560 PLCH1Q4KWH8 1693 aa19.47■□□□□ 0.71
HDAC8-204ENST00000373560 R3HDM1Q15032 1099 aaKnown RBP19.47■□□□□ 0.71
HDAC8-204ENST00000373560 SEPT12Q8IYM1 358 aa19.47■□□□□ 0.71
HDAC8-204ENST00000373560 TNS1Q9HBL0 1735 aaKnown RBP19.46■□□□□ 0.71
HDAC8-204ENST00000373560 USP32Q8NFA0 1604 aa19.46■□□□□ 0.71
HDAC8-204ENST00000373560 XPCQ01831 940 aaPredicted RBP19.45■□□□□ 0.7
HDAC8-204ENST00000373560 UNC5CLQ8IV45 518 aa19.45■□□□□ 0.7
HDAC8-204ENST00000373560 VPS8Q8N3P4 1428 aa19.44■□□□□ 0.7
HDAC8-204ENST00000373560 RGPD1P0DJD0 1748 aa19.44■□□□□ 0.7
HDAC8-204ENST00000373560 ANKRD50Q9ULJ7 1429 aa19.43■□□□□ 0.7
HDAC8-204ENST00000373560 CAMTA1Q9Y6Y1 1673 aa19.42■□□□□ 0.7
HDAC8-204ENST00000373560 ROBO2Q9HCK4 1378 aa19.42■□□□□ 0.7
HDAC8-204ENST00000373560 EN1Q05925 392 aaPredicted RBP19.41■□□□□ 0.7
HDAC8-204ENST00000373560 NEXMIFQ5QGS0 1516 aa19.41■□□□□ 0.7
HDAC8-204ENST00000373560 BAG6P46379 1132 aa19.4■□□□□ 0.7
HDAC8-204ENST00000373560 ABCA3Q99758 1704 aa19.39■□□□□ 0.7
HDAC8-204ENST00000373560 IFFO2Q5TF58 517 aa19.39■□□□□ 0.69
HDAC8-204ENST00000373560 KRT27Q7Z3Y8 459 aa19.39■□□□□ 0.69
HDAC8-204ENST00000373560 NWD2Q9ULI1 1742 aa19.38■□□□□ 0.69
HDAC8-204ENST00000373560 SAMD1Q6SPF0 538 aaPredicted RBP19.36■□□□□ 0.69
HDAC8-204ENST00000373560 CDC42BPGQ6DT37 1551 aa19.36■□□□□ 0.69
HDAC8-204ENST00000373560 NRAPQ86VF7 1730 aa19.35■□□□□ 0.69
HDAC8-204ENST00000373560 NPHP3Q7Z494 1330 aa19.34■□□□□ 0.69
HDAC8-204ENST00000373560 FAM182BQ5T319 152 aa19.34■□□□□ 0.69
HDAC8-204ENST00000373560 FOXO3O43524 673 aa19.33■□□□□ 0.68
HDAC8-204ENST00000373560 VPS72Q15906 364 aa19.33■□□□□ 0.68
HDAC8-204ENST00000373560 ONECUT3O60422 494 aaPredicted RBP19.32■□□□□ 0.68
HDAC8-204ENST00000373560 ESCO1Q5FWF5 840 aa19.32■□□□□ 0.68
HDAC8-204ENST00000373560 RREB1Q92766 1687 aa19.31■□□□□ 0.68
HDAC8-204ENST00000373560 DISP2A7MBM2 1401 aa19.31■□□□□ 0.68
HDAC8-204ENST00000373560 NUP188Q5SRE5 1749 aa19.31■□□□□ 0.68
HDAC8-204ENST00000373560 CLTCL1P53675 1640 aa19.3■□□□□ 0.68
HDAC8-204ENST00000373560 EZH2Q15910 746 aaKnown RBP19.3■□□□□ 0.68
HDAC8-204ENST00000373560 PRAG1Q86YV5 1406 aa19.3■□□□□ 0.68
HDAC8-204ENST00000373560 CCDC9Q9Y3X0 531 aaKnown RBP19.29■□□□□ 0.68
HDAC8-204ENST00000373560 APLP2Q06481 763 aa19.28■□□□□ 0.68
HDAC8-204ENST00000373560 ZNF326Q5BKZ1 582 aaKnown RBP19.28■□□□□ 0.68
HDAC8-204ENST00000373560 SENP3-EIF4A1A0A087X0R7 540 aa19.27■□□□□ 0.68
HDAC8-204ENST00000373560 SPATA31A3Q5VYP0 1347 aa19.26■□□□□ 0.67
HDAC8-204ENST00000373560 A0A0G2JS52 829 aa19.26■□□□□ 0.67
HDAC8-204ENST00000373560 PLEKHG5O94827 1062 aa19.26■□□□□ 0.67
HDAC8-204ENST00000373560 MYT1Q01538 1121 aa19.26■□□□□ 0.67
HDAC8-204ENST00000373560 CABLES1Q8TDN4 633 aa19.26■□□□□ 0.67
HDAC8-204ENST00000373560 THSD7AQ9UPZ6 1657 aa19.26■□□□□ 0.67
HDAC8-204ENST00000373560 NUTM2FA1L443 756 aa19.25■□□□□ 0.67
HDAC8-204ENST00000373560 FAM98CQ17RN3 349 aaKnown RBP19.25■□□□□ 0.67
HDAC8-204ENST00000373560 ADGRB2O60241 1585 aa19.23■□□□□ 0.67
HDAC8-204ENST00000373560 CAPN15O75808 1086 aa19.23■□□□□ 0.67
HDAC8-204ENST00000373560 SPINK5Q9NQ38 1064 aaPredicted RBP19.23■□□□□ 0.67
HDAC8-204ENST00000373560 HFM1A2PYH4 1435 aa19.23■□□□□ 0.67
HDAC8-204ENST00000373560 KIF1AQ12756 1690 aa19.23■□□□□ 0.67
HDAC8-204ENST00000373560 FMN2Q9NZ56 1722 aa19.22■□□□□ 0.67
HDAC8-204ENST00000373560 ZNF784Q8NCA9 323 aaPredicted RBP19.22■□□□□ 0.67
HDAC8-204ENST00000373560 NAIPQ13075 1403 aa19.22■□□□□ 0.67
HDAC8-204ENST00000373560 CAMKK2Q96RR4 588 aa19.21■□□□□ 0.67
HDAC8-204ENST00000373560 RGPD8O14715 1765 aaPredicted RBP19.21■□□□□ 0.67
HDAC8-204ENST00000373560 TNS3Q68CZ2 1445 aa19.19■□□□□ 0.66
HDAC8-204ENST00000373560 KIF1BO60333 1816 aa19.18■□□□□ 0.66
HDAC8-204ENST00000373560 NUP155O75694 1391 aa19.18■□□□□ 0.66
HDAC8-204ENST00000373560 UTRNP46939 3433 aa19.17■□□□□ 0.66
HDAC8-204ENST00000373560 LRPPRCP42704 1394 aaKnown RBP19.17■□□□□ 0.66
HDAC8-204ENST00000373560 NINLQ9Y2I6 1382 aa19.17■□□□□ 0.66
HDAC8-204ENST00000373560 CCDC144AA2RUR9 1427 aa19.17■□□□□ 0.66
HDAC8-204ENST00000373560 FAM83GA6ND36 823 aa19.16■□□□□ 0.66
HDAC8-204ENST00000373560 NRKQ7Z2Y5 1582 aa19.15■□□□□ 0.66
HDAC8-204ENST00000373560 FAM50AQ14320 339 aaKnown RBP19.15■□□□□ 0.66
HDAC8-204ENST00000373560 HAP1P54257 671 aaPredicted RBP19.14■□□□□ 0.65
HDAC8-204ENST00000373560 IFT172Q9UG01 1749 aa19.14■□□□□ 0.65
HDAC8-204ENST00000373560 PPLO60437 1756 aa19.14■□□□□ 0.65
HDAC8-204ENST00000373560 TRIM37O94972 964 aa19.13■□□□□ 0.65
HDAC8-204ENST00000373560 C1QTNF8P60827 252 aa19.13■□□□□ 0.65
HDAC8-204ENST00000373560 KRT28Q7Z3Y7 464 aa19.13■□□□□ 0.65
HDAC8-204ENST00000373560 PPP1R1BQ9UD71 204 aaPredicted RBP19.13■□□□□ 0.65
HDAC8-204ENST00000373560 MYOM1P52179 1685 aa19.13■□□□□ 0.65
HDAC8-204ENST00000373560 COL14A1Q05707 1796 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms