RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 QRICH2Q9H0J4 1663 aa26.09■■□□□ 1.77
PBX3-202ENST00000373482 ATF3P18847 181 aa26.08■■□□□ 1.77
PBX3-202ENST00000373482 PRAM1Q96QH2 718 aa26.08■■□□□ 1.77
PBX3-202ENST00000373482 PLEKHH1Q9ULM0 1364 aa26.07■■□□□ 1.76
PBX3-202ENST00000373482 CDC42BPGQ6DT37 1551 aa26.07■■□□□ 1.76
PBX3-202ENST00000373482 CADPS2Q86UW7 1296 aa26.07■■□□□ 1.76
PBX3-202ENST00000373482 GPRASP1Q5JY77 1395 aa26.07■■□□□ 1.76
PBX3-202ENST00000373482 FMN2Q9NZ56 1722 aa26.05■■□□□ 1.76
PBX3-202ENST00000373482 SAFB2Q14151 953 aaKnown RBP eCLIP26.04■■□□□ 1.76
PBX3-202ENST00000373482 CARD11Q9BXL7 1154 aa26.04■■□□□ 1.76
PBX3-202ENST00000373482 RGPD8O14715 1765 aaPredicted RBP26.04■■□□□ 1.76
PBX3-202ENST00000373482 ADGRB2O60241 1585 aa26.03■■□□□ 1.76
PBX3-202ENST00000373482 EIF3AQ14152 1382 aaKnown RBP26.03■■□□□ 1.76
PBX3-202ENST00000373482 ROBO1Q9Y6N7 1651 aa26.03■■□□□ 1.76
PBX3-202ENST00000373482 SCAF1Q9H7N4 1312 aaKnown RBP26.02■■□□□ 1.76
PBX3-202ENST00000373482 PIP4K2BP78356 416 aa26■■□□□ 1.75
PBX3-202ENST00000373482 SLAIN2Q9P270 581 aa25.99■■□□□ 1.75
PBX3-202ENST00000373482 CENPJQ9HC77 1338 aaPredicted RBP25.97■■□□□ 1.75
PBX3-202ENST00000373482 MST1RQ04912 1400 aa25.97■■□□□ 1.75
PBX3-202ENST00000373482 MINK1Q8N4C8 1332 aaPredicted RBP25.96■■□□□ 1.75
PBX3-202ENST00000373482 ITSN1Q15811 1721 aa25.94■■□□□ 1.74
PBX3-202ENST00000373482 HIRIP3Q9BW71 556 aaPredicted RBP25.92■■□□□ 1.74
PBX3-202ENST00000373482 PHLPP1O60346 1717 aa25.91■■□□□ 1.74
PBX3-202ENST00000373482 C1orf167Q5SNV9 1468 aa25.91■■□□□ 1.74
PBX3-202ENST00000373482 USP32Q8NFA0 1604 aa25.89■■□□□ 1.74
PBX3-202ENST00000373482 KIF1AQ12756 1690 aa25.89■■□□□ 1.73
PBX3-202ENST00000373482 ILDR1Q86SU0 546 aaPredicted RBP25.88■■□□□ 1.73
PBX3-202ENST00000373482 TULP4Q9NRJ4 1543 aa25.88■■□□□ 1.73
PBX3-202ENST00000373482 WASLO00401 505 aaPredicted RBP25.87■■□□□ 1.73
PBX3-202ENST00000373482 NHSL1Q5SYE7 1610 aa25.87■■□□□ 1.73
PBX3-202ENST00000373482 NUTM2FA1L443 756 aa25.86■■□□□ 1.73
PBX3-202ENST00000373482 USP47Q96K76 1375 aa25.85■■□□□ 1.73
PBX3-202ENST00000373482 ANKARQ7Z5J8 1434 aa25.85■■□□□ 1.73
PBX3-202ENST00000373482 SBNO2Q9Y2G9 1366 aa25.83■■□□□ 1.73
PBX3-202ENST00000373482 BRINP3Q76B58 766 aa25.83■■□□□ 1.73
PBX3-202ENST00000373482 TOPAZ1Q8N9V7 1692 aa25.83■■□□□ 1.73
PBX3-202ENST00000373482 AHDC1Q5TGY3 1603 aaPredicted RBP25.82■■□□□ 1.72
PBX3-202ENST00000373482 EVC2Q86UK5 1308 aa25.82■■□□□ 1.72
PBX3-202ENST00000373482 ESCO1Q5FWF5 840 aa25.81■■□□□ 1.72
PBX3-202ENST00000373482 CDK19Q9BWU1 502 aa25.81■■□□□ 1.72
PBX3-202ENST00000373482 ORAI2Q96SN7 254 aa25.8■■□□□ 1.72
PBX3-202ENST00000373482 ST20-MTHFSA0A0A6YYL1 179 aa25.79■■□□□ 1.72
PBX3-202ENST00000373482 SLC24A1O60721 1099 aa25.78■■□□□ 1.72
PBX3-202ENST00000373482 SRPK2P78362 688 aaKnown RBP25.78■■□□□ 1.72
PBX3-202ENST00000373482 ATP7BP35670 1465 aa25.78■■□□□ 1.72
PBX3-202ENST00000373482 HSPA1LP34931 641 aa25.76■■□□□ 1.71
PBX3-202ENST00000373482 COL16A1Q07092 1604 aaPredicted RBP25.76■■□□□ 1.71
PBX3-202ENST00000373482 EIF4G2P78344 907 aaKnown RBP eCLIP25.74■■□□□ 1.71
PBX3-202ENST00000373482 NUDT16Q96DE0 195 aaKnown RBP25.74■■□□□ 1.71
PBX3-202ENST00000373482 PRR36Q9H6K5 1346 aa25.73■■□□□ 1.71
PBX3-202ENST00000373482 PHF8Q9UPP1 1060 aa25.73■■□□□ 1.71
PBX3-202ENST00000373482 CABP2Q9NPB3 220 aa25.72■■□□□ 1.71
PBX3-202ENST00000373482 NPHP3Q7Z494 1330 aa25.71■■□□□ 1.71
PBX3-202ENST00000373482 TESK2Q96S53 571 aa25.7■■□□□ 1.7
PBX3-202ENST00000373482 CCDC61Q9Y6R9 512 aa25.7■■□□□ 1.7
PBX3-202ENST00000373482 FOXO3O43524 673 aa25.68■■□□□ 1.7
PBX3-202ENST00000373482 PMFBP1Q8TBY8 1022 aa25.68■■□□□ 1.7
PBX3-202ENST00000373482 AKAP12Q02952 1782 aa25.68■■□□□ 1.7
PBX3-202ENST00000373482 ATAD2Q6PL18 1390 aa25.68■■□□□ 1.7
PBX3-202ENST00000373482 SHPRHQ149N8 1683 aa25.68■■□□□ 1.7
PBX3-202ENST00000373482 TMF1P82094 1093 aa25.67■■□□□ 1.7
PBX3-202ENST00000373482 PPIP5K1Q6PFW1 1433 aa25.67■■□□□ 1.7
PBX3-202ENST00000373482 DDX17Q92841 729 aaKnown RBP25.67■■□□□ 1.7
PBX3-202ENST00000373482 HSPA5P11021 654 aaKnown RBP25.66■■□□□ 1.7
PBX3-202ENST00000373482 ZEB1P37275 1124 aaPredicted RBP25.65■■□□□ 1.7
PBX3-202ENST00000373482 PXDNQ92626 1479 aa25.65■■□□□ 1.7
PBX3-202ENST00000373482 TRPM3Q9HCF6 1732 aaPredicted RBP25.64■■□□□ 1.7
PBX3-202ENST00000373482 NGDNQ8NEJ9 315 aaKnown RBP25.64■■□□□ 1.7
PBX3-202ENST00000373482 PSME1Q06323 249 aa25.63■■□□□ 1.69
PBX3-202ENST00000373482 PUS7Q96PZ0 661 aaKnown RBP25.63■■□□□ 1.69
PBX3-202ENST00000373482 SOS2Q07890 1332 aaPredicted RBP25.63■■□□□ 1.69
PBX3-202ENST00000373482 CDCA8Q53HL2 280 aa25.62■■□□□ 1.69
PBX3-202ENST00000373482 LRRC59Q96AG4 307 aaKnown RBP25.62■■□□□ 1.69
PBX3-202ENST00000373482 PLEKHG3A1L390 1219 aa25.61■■□□□ 1.69
PBX3-202ENST00000373482 DISP3Q9P2K9 1392 aa25.6■■□□□ 1.69
PBX3-202ENST00000373482 KRT28Q7Z3Y7 464 aa25.6■■□□□ 1.69
PBX3-202ENST00000373482 POLR3AO14802 1390 aaPredicted RBP25.59■■□□□ 1.69
PBX3-202ENST00000373482 JCADQ9P266 1359 aa25.59■■□□□ 1.69
PBX3-202ENST00000373482 XPCQ01831 940 aaPredicted RBP25.59■■□□□ 1.69
PBX3-202ENST00000373482 CABP1Q9NZU7 370 aa25.59■■□□□ 1.69
PBX3-202ENST00000373482 MON2Q7Z3U7 1717 aa25.59■■□□□ 1.69
PBX3-202ENST00000373482 ACEP12821 1306 aa25.59■■□□□ 1.69
PBX3-202ENST00000373482 ALS2Q96Q42 1657 aa25.58■■□□□ 1.68
PBX3-202ENST00000373482 COL22A1Q8NFW1 1626 aaPredicted RBP25.56■■□□□ 1.68
PBX3-202ENST00000373482 MYOM1P52179 1685 aa25.56■■□□□ 1.68
PBX3-202ENST00000373482 TMC1Q8TDI8 760 aa25.55■■□□□ 1.68
PBX3-202ENST00000373482 NINLQ9Y2I6 1382 aa25.55■■□□□ 1.68
PBX3-202ENST00000373482 SBNO1A3KN83 1393 aa25.54■■□□□ 1.68
PBX3-202ENST00000373482 TNS3Q68CZ2 1445 aa25.53■■□□□ 1.68
PBX3-202ENST00000373482 ZNF692Q9BU19 519 aaPredicted RBP25.51■■□□□ 1.67
PBX3-202ENST00000373482 SPATA31A3Q5VYP0 1347 aa25.51■■□□□ 1.67
PBX3-202ENST00000373482 PNPLA6Q8IY17 1366 aa25.51■■□□□ 1.67
PBX3-202ENST00000373482 MARF1Q9Y4F3 1742 aaKnown RBP25.51■■□□□ 1.67
PBX3-202ENST00000373482 BRD4O60885 1362 aaPredicted RBP25.5■■□□□ 1.67
PBX3-202ENST00000373482 PAK3O75914 559 aaPredicted RBP25.5■■□□□ 1.67
PBX3-202ENST00000373482 NRKQ7Z2Y5 1582 aa25.5■■□□□ 1.67
PBX3-202ENST00000373482 ABCA3Q99758 1704 aa25.49■■□□□ 1.67
PBX3-202ENST00000373482 USP6P35125 1406 aa25.49■■□□□ 1.67
PBX3-202ENST00000373482 ARHGEF10O15013 1369 aa25.48■■□□□ 1.67
PBX3-202ENST00000373482 SPATA31A6Q5VVP1 1343 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms