RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 RALYLQ86SE5 291 aaKnown RBP11.98□□□□□ -0.49
TRERF1-204ENST00000372922 CUX1P39880 1505 aa11.98□□□□□ -0.49
TRERF1-204ENST00000372922 ZBED9Q6R2W3 1325 aa11.98□□□□□ -0.49
TRERF1-204ENST00000372922 CCDC27Q2M243 656 aa11.98□□□□□ -0.49
TRERF1-204ENST00000372922 BRMS1Q9HCU9 246 aa11.97□□□□□ -0.49
TRERF1-204ENST00000372922 NEUROD6Q96NK8 337 aa11.97□□□□□ -0.49
TRERF1-204ENST00000372922 BICD2Q8TD16 824 aa11.97□□□□□ -0.49
TRERF1-204ENST00000372922 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
TRERF1-204ENST00000372922 AIMP1Q12904 312 aaKnown RBP11.96□□□□□ -0.49
TRERF1-204ENST00000372922 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.49
TRERF1-204ENST00000372922 PDE4AP27815 886 aa11.96□□□□□ -0.49
TRERF1-204ENST00000372922 HSP90AB3PQ58FF7 597 aa11.96□□□□□ -0.49
TRERF1-204ENST00000372922 R3HCC1Q9Y3T6 440 aaKnown RBP11.96□□□□□ -0.49
TRERF1-204ENST00000372922 WASHC4Q2M389 1173 aa11.96□□□□□ -0.5
TRERF1-204ENST00000372922 SMC3Q9UQE7 1217 aa11.96□□□□□ -0.5
TRERF1-204ENST00000372922 HMOX1P09601 288 aa11.95□□□□□ -0.5
TRERF1-204ENST00000372922 XBP1P17861 261 aa11.95□□□□□ -0.5
TRERF1-204ENST00000372922 NOM1Q5C9Z4 860 aaKnown RBP11.95□□□□□ -0.5
TRERF1-204ENST00000372922 KIF6Q6ZMV9 814 aa11.95□□□□□ -0.5
TRERF1-204ENST00000372922 PPP1R1BQ9UD71 204 aaPredicted RBP11.95□□□□□ -0.5
TRERF1-204ENST00000372922 EXOC6Q8TAG9 804 aa11.95□□□□□ -0.5
TRERF1-204ENST00000372922 NINLQ9Y2I6 1382 aa11.95□□□□□ -0.5
TRERF1-204ENST00000372922 FYB1O15117 783 aa11.95□□□□□ -0.5
TRERF1-204ENST00000372922 NLRP6P59044 892 aa11.95□□□□□ -0.5
TRERF1-204ENST00000372922 RRP12Q5JTH9 1297 aaKnown RBP11.95□□□□□ -0.5
TRERF1-204ENST00000372922 MAP7D2Q96T17 732 aa11.95□□□□□ -0.5
TRERF1-204ENST00000372922 RBM25P49756 843 aaKnown RBP11.94□□□□□ -0.5
TRERF1-204ENST00000372922 UBTFL1P0CB47 393 aaPredicted RBP11.94□□□□□ -0.5
TRERF1-204ENST00000372922 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
TRERF1-204ENST00000372922 SMG6Q86US8 1419 aaKnown RBP11.93□□□□□ -0.5
TRERF1-204ENST00000372922 TBC1D2BQ9UPU7 963 aa11.93□□□□□ -0.5
TRERF1-204ENST00000372922 AAMPQ13685 434 aa11.93□□□□□ -0.5
TRERF1-204ENST00000372922 NUTM2GQ5VZR2 741 aa11.93□□□□□ -0.5
TRERF1-204ENST00000372922 SASS6Q6UVJ0 657 aa11.93□□□□□ -0.5
TRERF1-204ENST00000372922 VPS37CA5D8V6 355 aaPredicted RBP11.93□□□□□ -0.5
TRERF1-204ENST00000372922 PLEKHO1Q53GL0 409 aaPredicted RBP11.93□□□□□ -0.5
TRERF1-204ENST00000372922 ODF2Q5BJF6 829 aa11.93□□□□□ -0.5
TRERF1-204ENST00000372922 CT47A1Q5JQC4 288 aaPredicted RBP11.93□□□□□ -0.5
TRERF1-204ENST00000372922 DHX37Q8IY37 1157 aaKnown RBP11.92□□□□□ -0.5
TRERF1-204ENST00000372922 ABTB2Q8N961 1025 aa11.92□□□□□ -0.5
TRERF1-204ENST00000372922 GAS2L2Q8NHY3 880 aa11.92□□□□□ -0.5
TRERF1-204ENST00000372922 IKQ13123 557 aaPredicted RBP11.92□□□□□ -0.5
TRERF1-204ENST00000372922 PSMA5P28066 241 aa11.92□□□□□ -0.5
TRERF1-204ENST00000372922 CCDC30Q5VVM6 783 aa11.92□□□□□ -0.5
TRERF1-204ENST00000372922 CCDC73Q6ZRK6 1079 aa11.92□□□□□ -0.5
TRERF1-204ENST00000372922 ARHGAP5Q13017 1502 aa11.92□□□□□ -0.5
TRERF1-204ENST00000372922 SLC3A2P08195 630 aaKnown RBP11.92□□□□□ -0.5
TRERF1-204ENST00000372922 SF3B2Q13435 895 aaKnown RBP11.92□□□□□ -0.5
TRERF1-204ENST00000372922 SART3Q15020 963 aaKnown RBP11.92□□□□□ -0.5
TRERF1-204ENST00000372922 TEX35Q5T0J7 233 aa11.92□□□□□ -0.5
TRERF1-204ENST00000372922 CABP2Q9NPB3 220 aa11.92□□□□□ -0.5
TRERF1-204ENST00000372922 RRBP1Q9P2E9 1410 aaKnown RBP11.92□□□□□ -0.5
TRERF1-204ENST00000372922 EPS15P42566 896 aa11.91□□□□□ -0.5
TRERF1-204ENST00000372922 ESCO1Q5FWF5 840 aa11.91□□□□□ -0.5
TRERF1-204ENST00000372922 CNTROBQ8N137 903 aa11.91□□□□□ -0.5
TRERF1-204ENST00000372922 FGD5Q6ZNL6 1462 aa11.91□□□□□ -0.5
TRERF1-204ENST00000372922 FYCO1Q9BQS8 1478 aa11.91□□□□□ -0.5
TRERF1-204ENST00000372922 NUCB2P80303 420 aa11.91□□□□□ -0.5
TRERF1-204ENST00000372922 ZNF592Q92610 1267 aa11.91□□□□□ -0.5
TRERF1-204ENST00000372922 GGNBP2Q9H3C7 697 aa11.91□□□□□ -0.5
TRERF1-204ENST00000372922 HOMER1Q86YM7 354 aa11.91□□□□□ -0.5
TRERF1-204ENST00000372922 WWC2Q6AWC2 1192 aa11.9□□□□□ -0.5
TRERF1-204ENST00000372922 PROSER2Q86WR7 435 aaPredicted RBP11.9□□□□□ -0.5
TRERF1-204ENST00000372922 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.9□□□□□ -0.5
TRERF1-204ENST00000372922 CCAR1Q8IX12 1150 aaKnown RBP11.9□□□□□ -0.5
TRERF1-204ENST00000372922 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRERF1-204ENST00000372922 NAP1L1P55209 391 aaKnown RBP11.9□□□□□ -0.51
TRERF1-204ENST00000372922 OLFM4Q6UX06 510 aa11.89□□□□□ -0.51
TRERF1-204ENST00000372922 TXNDC2Q86VQ3 553 aa11.89□□□□□ -0.51
TRERF1-204ENST00000372922 RDXP35241 583 aaKnown RBP11.89□□□□□ -0.51
TRERF1-204ENST00000372922 FOSBP53539 338 aa11.89□□□□□ -0.51
TRERF1-204ENST00000372922 CHMP5Q9NZZ3 219 aa11.89□□□□□ -0.51
TRERF1-204ENST00000372922 GNAI3P08754 354 aa11.89□□□□□ -0.51
TRERF1-204ENST00000372922 RBM42Q9BTD8 480 aaKnown RBP11.89□□□□□ -0.51
TRERF1-204ENST00000372922 TATP17735 454 aaPredicted RBP11.88□□□□□ -0.51
TRERF1-204ENST00000372922 CLASRPQ8N2M8 674 aaKnown RBP11.88□□□□□ -0.51
TRERF1-204ENST00000372922 GNL3LQ9NVN8 582 aaKnown RBP11.88□□□□□ -0.51
TRERF1-204ENST00000372922 HIP1O00291 1037 aa11.88□□□□□ -0.51
TRERF1-204ENST00000372922 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.88□□□□□ -0.51
TRERF1-204ENST00000372922 NAT10Q9H0A0 1025 aaKnown RBP11.88□□□□□ -0.51
TRERF1-204ENST00000372922 FSD1Q9BTV5 496 aa11.88□□□□□ -0.51
TRERF1-204ENST00000372922 LNPKQ9C0E8 428 aa11.87□□□□□ -0.51
TRERF1-204ENST00000372922 CDR1P51861 262 aa11.87□□□□□ -0.51
TRERF1-204ENST00000372922 SLC4A3P48751 1232 aa11.87□□□□□ -0.51
TRERF1-204ENST00000372922 CDC45O75419 566 aa11.87□□□□□ -0.51
TRERF1-204ENST00000372922 ANKRD50Q9ULJ7 1429 aa11.87□□□□□ -0.51
TRERF1-204ENST00000372922 ERC1Q8IUD2 1116 aa11.87□□□□□ -0.51
TRERF1-204ENST00000372922 STRN4Q9NRL3 753 aa11.87□□□□□ -0.51
TRERF1-204ENST00000372922 FGD6Q6ZV73 1430 aa11.87□□□□□ -0.51
TRERF1-204ENST00000372922 FAM177BA6PVY3 158 aa11.86□□□□□ -0.51
TRERF1-204ENST00000372922 OFD1O75665 1012 aa11.86□□□□□ -0.51
TRERF1-204ENST00000372922 TMEM132AQ24JP5 1023 aa11.86□□□□□ -0.51
TRERF1-204ENST00000372922 TMEM132EQ6IEE7 984 aa11.86□□□□□ -0.51
TRERF1-204ENST00000372922 MTMR7Q9Y216 660 aa11.86□□□□□ -0.51
TRERF1-204ENST00000372922 RBM10P98175 930 aaKnown RBP11.86□□□□□ -0.51
TRERF1-204ENST00000372922 THEMISQ8N1K5 641 aaPredicted RBP11.86□□□□□ -0.51
TRERF1-204ENST00000372922 NEFHP12036 1026 aa11.86□□□□□ -0.51
TRERF1-204ENST00000372922 RUFY1Q96T51 708 aa11.85□□□□□ -0.51
TRERF1-204ENST00000372922 CNNM1Q9NRU3 951 aa11.85□□□□□ -0.51
TRERF1-204ENST00000372922 RAD54L2Q9Y4B4 1467 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms