RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 ZMYND15Q9H091 742 aa20.08■□□□□ 0.8
PABPC4-202ENST00000372857 CHMP5Q9NZZ3 219 aa20.08■□□□□ 0.8
PABPC4-202ENST00000372857 IQGAP1P46940 1657 aa20.07■□□□□ 0.8
PABPC4-202ENST00000372857 MYOM1P52179 1685 aa20.07■□□□□ 0.8
PABPC4-202ENST00000372857 IQGAP3Q86VI3 1631 aa20.07■□□□□ 0.8
PABPC4-202ENST00000372857 C22orf23Q9BZE7 217 aa20.07■□□□□ 0.8
PABPC4-202ENST00000372857 CARD14Q9BXL6 1004 aa20.06■□□□□ 0.8
PABPC4-202ENST00000372857 RWDD1Q9H446 243 aaPredicted RBP20.06■□□□□ 0.8
PABPC4-202ENST00000372857 TMEM132EQ6IEE7 984 aa20.05■□□□□ 0.8
PABPC4-202ENST00000372857 SCAF11Q99590 1463 aaKnown RBP20.05■□□□□ 0.8
PABPC4-202ENST00000372857 ABCC1P33527 1531 aa20.05■□□□□ 0.8
PABPC4-202ENST00000372857 MRE11P49959 708 aa20.05■□□□□ 0.8
PABPC4-202ENST00000372857 TRAK1Q9UPV9 953 aa20.05■□□□□ 0.8
PABPC4-202ENST00000372857 NPC1L1Q9UHC9 1359 aa20.05■□□□□ 0.8
PABPC4-202ENST00000372857 MADDQ8WXG6 1647 aa20.05■□□□□ 0.8
PABPC4-202ENST00000372857 FANCAO15360 1455 aa20.05■□□□□ 0.8
PABPC4-202ENST00000372857 MAST1Q9Y2H9 1570 aa20.05■□□□□ 0.8
PABPC4-202ENST00000372857 ATP10AO60312 1499 aa20.04■□□□□ 0.8
PABPC4-202ENST00000372857 MYH16Q9H6N6 1097 aa20.04■□□□□ 0.8
PABPC4-202ENST00000372857 GRPEL1Q9HAV7 217 aa20.04■□□□□ 0.8
PABPC4-202ENST00000372857 SAFB2Q14151 953 aaKnown RBP eCLIP20.03■□□□□ 0.8
PABPC4-202ENST00000372857 PLXNC1O60486 1568 aa20.03■□□□□ 0.8
PABPC4-202ENST00000372857 ERBB4Q15303 1308 aa20.03■□□□□ 0.8
PABPC4-202ENST00000372857 TCP11L2Q8N4U5 519 aa20.01■□□□□ 0.79
PABPC4-202ENST00000372857 NGEFQ8N5V2 710 aa20.01■□□□□ 0.79
PABPC4-202ENST00000372857 ESPNB1AK53 854 aa20■□□□□ 0.79
PABPC4-202ENST00000372857 KANK1Q14678 1352 aa20■□□□□ 0.79
PABPC4-202ENST00000372857 ADGRL1O94910 1474 aa19.99■□□□□ 0.79
PABPC4-202ENST00000372857 RTEL1-TNFRSF6BF6WH68 1400 aa19.99■□□□□ 0.79
PABPC4-202ENST00000372857 RRP9O43818 475 aaKnown RBP19.99■□□□□ 0.79
PABPC4-202ENST00000372857 HSCBQ8IWL3 235 aa19.99■□□□□ 0.79
PABPC4-202ENST00000372857 RAPGEF3O95398 923 aa19.98■□□□□ 0.79
PABPC4-202ENST00000372857 KDM5AP29375 1690 aaKnown RBP19.98■□□□□ 0.79
PABPC4-202ENST00000372857 NPM1P06748 294 aaKnown RBP eCLIP19.97■□□□□ 0.79
PABPC4-202ENST00000372857 CFAP65Q6ZU64 1925 aaKnown RBP19.97■□□□□ 0.79
PABPC4-202ENST00000372857 RUNDC1Q96C34 613 aa19.97■□□□□ 0.79
PABPC4-202ENST00000372857 ZMYM3Q14202 1370 aa19.96■□□□□ 0.79
PABPC4-202ENST00000372857 ZFYVE16Q7Z3T8 1539 aa19.96■□□□□ 0.79
PABPC4-202ENST00000372857 DDX11L8A8MPP1 907 aa19.96■□□□□ 0.79
PABPC4-202ENST00000372857 AAMPQ13685 434 aa19.96■□□□□ 0.79
PABPC4-202ENST00000372857 MVPQ14764 893 aaKnown RBP19.96■□□□□ 0.79
PABPC4-202ENST00000372857 FTSJ3Q8IY81 847 aaKnown RBP19.96■□□□□ 0.79
PABPC4-202ENST00000372857 ZNF692Q9BU19 519 aaPredicted RBP19.96■□□□□ 0.79
PABPC4-202ENST00000372857 TRIM44Q96DX7 344 aaPredicted RBP19.95■□□□□ 0.78
PABPC4-202ENST00000372857 ASXL2Q76L83 1435 aa19.95■□□□□ 0.78
PABPC4-202ENST00000372857 GAS2L3Q86XJ1 694 aa19.95■□□□□ 0.78
PABPC4-202ENST00000372857 CEP152O94986 1710 aa19.95■□□□□ 0.78
PABPC4-202ENST00000372857 POLR3AO14802 1390 aaPredicted RBP19.94■□□□□ 0.78
PABPC4-202ENST00000372857 MORC1Q86VD1 984 aa19.94■□□□□ 0.78
PABPC4-202ENST00000372857 SLC12A5Q9H2X9 1139 aa19.94■□□□□ 0.78
PABPC4-202ENST00000372857 CLTCL1P53675 1640 aa19.93■□□□□ 0.78
PABPC4-202ENST00000372857 ERVK-7P63135 1459 aa19.93■□□□□ 0.78
PABPC4-202ENST00000372857 DZIP1LQ8IYY4 767 aaKnown RBP19.92■□□□□ 0.78
PABPC4-202ENST00000372857 TNPO1Q92973 898 aaKnown RBP19.92■□□□□ 0.78
PABPC4-202ENST00000372857 FOXD4L1Q9NU39 408 aa19.92■□□□□ 0.78
PABPC4-202ENST00000372857 SPHKAPQ2M3C7 1700 aa19.91■□□□□ 0.78
PABPC4-202ENST00000372857 ZKSCAN2Q63HK3 967 aa19.91■□□□□ 0.78
PABPC4-202ENST00000372857 ATP7AQ04656 1500 aa19.91■□□□□ 0.78
PABPC4-202ENST00000372857 WDR63Q8IWG1 891 aa19.9■□□□□ 0.78
PABPC4-202ENST00000372857 UHRF1BP1LA0JNW5 1464 aa19.9■□□□□ 0.78
PABPC4-202ENST00000372857 TSR2Q969E8 191 aaKnown RBP19.9■□□□□ 0.78
PABPC4-202ENST00000372857 STK26Q9P289 416 aa19.9■□□□□ 0.78
PABPC4-202ENST00000372857 A0A0U1RQG5 324 aaPredicted RBP19.89■□□□□ 0.78
PABPC4-202ENST00000372857 ITPRIPQ8IWB1 547 aa19.89■□□□□ 0.77
PABPC4-202ENST00000372857 PHF23Q9BUL5 403 aaPredicted RBP19.88■□□□□ 0.77
PABPC4-202ENST00000372857 SHPRHQ149N8 1683 aa19.88■□□□□ 0.77
PABPC4-202ENST00000372857 NOS1P29475 1434 aa19.88■□□□□ 0.77
PABPC4-202ENST00000372857 HSP90AB1P08238 724 aaKnown RBP19.87■□□□□ 0.77
PABPC4-202ENST00000372857 NSD3Q9BZ95 1437 aa19.87■□□□□ 0.77
PABPC4-202ENST00000372857 MTHFSP49914 203 aa19.87■□□□□ 0.77
PABPC4-202ENST00000372857 SMC4Q9NTJ3 1288 aa19.87■□□□□ 0.77
PABPC4-202ENST00000372857 TRPM2O94759 1503 aa19.87■□□□□ 0.77
PABPC4-202ENST00000372857 IQSEC2Q5JU85 1478 aa19.87■□□□□ 0.77
PABPC4-202ENST00000372857 PTPRTO14522 1441 aa19.86■□□□□ 0.77
PABPC4-202ENST00000372857 DDIT3P35638 169 aa19.86■□□□□ 0.77
PABPC4-202ENST00000372857 TRIM27P14373 513 aa19.85■□□□□ 0.77
PABPC4-202ENST00000372857 ISY1Q9ULR0 285 aaKnown RBP19.84■□□□□ 0.77
PABPC4-202ENST00000372857 GBP4Q96PP9 640 aa19.84■□□□□ 0.77
PABPC4-202ENST00000372857 NCOA3Q9Y6Q9 1424 aa19.83■□□□□ 0.77
PABPC4-202ENST00000372857 U2AF1L5P0DN76 240 aaPredicted RBP19.83■□□□□ 0.77
PABPC4-202ENST00000372857 U2AF1Q01081 240 aaKnown RBP eCLIP19.83■□□□□ 0.775e-6■□□□□ 8
PABPC4-202ENST00000372857 LNPKQ9C0E8 428 aa19.83■□□□□ 0.77
PABPC4-202ENST00000372857 EXOSC9Q06265 439 aaKnown RBP19.82■□□□□ 0.76
PABPC4-202ENST00000372857 HDAC1Q13547 482 aaPredicted RBP19.82■□□□□ 0.76
PABPC4-202ENST00000372857 OSCARQ8IYS5 282 aa19.82■□□□□ 0.76
PABPC4-202ENST00000372857 CD2BP2O95400 341 aaKnown RBP19.81■□□□□ 0.76
PABPC4-202ENST00000372857 SMC5Q8IY18 1101 aa19.81■□□□□ 0.76
PABPC4-202ENST00000372857 RBM25P49756 843 aaKnown RBP19.81■□□□□ 0.76
PABPC4-202ENST00000372857 RAB3GAP1Q15042 981 aa19.81■□□□□ 0.76
PABPC4-202ENST00000372857 KIAA1211Q6ZU35 1233 aa19.81■□□□□ 0.76
PABPC4-202ENST00000372857 SSH1Q8WYL5 1049 aa19.81■□□□□ 0.76
PABPC4-202ENST00000372857 STAC3Q96MF2 364 aa19.81■□□□□ 0.76
PABPC4-202ENST00000372857 CABP2Q9NPB3 220 aa19.81■□□□□ 0.76
PABPC4-202ENST00000372857 CCDC27Q2M243 656 aa19.8■□□□□ 0.76
PABPC4-202ENST00000372857 DDX19BQ9UMR2 479 aa19.8■□□□□ 0.76
PABPC4-202ENST00000372857 SNX21Q969T3 373 aa19.79■□□□□ 0.76
PABPC4-202ENST00000372857 CFAP53Q96M91 514 aa19.79■□□□□ 0.76
PABPC4-202ENST00000372857 TMEM57Q8N5G2 664 aa19.79■□□□□ 0.76
PABPC4-202ENST00000372857 NOB1Q9ULX3 412 aaKnown RBP19.79■□□□□ 0.76
PABPC4-202ENST00000372857 CD109Q6YHK3 1445 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms