RNA–Protein interactions for RNA: ENST00000372633.1

RAB40A-202, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 BASIC

Gene RAB40A, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-202ENST00000372633 NRXN1Q9ULB1 1477 aa17.52■□□□□ 0.39
RAB40A-202ENST00000372633 ZCCHC11Q5TAX3 1644 aaKnown RBP17.52■□□□□ 0.39
RAB40A-202ENST00000372633 RUNDC1Q96C34 613 aa17.52■□□□□ 0.39
RAB40A-202ENST00000372633 CFAP70Q5T0N1 1121 aa17.51■□□□□ 0.39
RAB40A-202ENST00000372633 TBC1D2Q9BYX2 928 aa17.51■□□□□ 0.39
RAB40A-202ENST00000372633 RLBP1P12271 317 aa17.51■□□□□ 0.39
RAB40A-202ENST00000372633 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
RAB40A-202ENST00000372633 KIF1BO60333 1816 aa17.5■□□□□ 0.39
RAB40A-202ENST00000372633 CCDC27Q2M243 656 aa17.5■□□□□ 0.39
RAB40A-202ENST00000372633 UBE2Q2Q8WVN8 375 aa17.5■□□□□ 0.39
RAB40A-202ENST00000372633 PDZRN3Q9UPQ7 1066 aa17.5■□□□□ 0.39
RAB40A-202ENST00000372633 USP32Q8NFA0 1604 aa17.5■□□□□ 0.39
RAB40A-202ENST00000372633 ERCC6L2Q5T890 1561 aa17.49■□□□□ 0.39
RAB40A-202ENST00000372633 SETBP1Q9Y6X0 1596 aa17.49■□□□□ 0.39
RAB40A-202ENST00000372633 ZC3H13Q5T200 1668 aaKnown RBP17.48■□□□□ 0.39
RAB40A-202ENST00000372633 ADGRF5Q8IZF2 1346 aa17.48■□□□□ 0.39
RAB40A-202ENST00000372633 RWDD1Q9H446 243 aaPredicted RBP17.48■□□□□ 0.39
RAB40A-202ENST00000372633 INO80Q9ULG1 1556 aaPredicted RBP17.48■□□□□ 0.39
RAB40A-202ENST00000372633 TCP11L2Q8N4U5 519 aa17.47■□□□□ 0.39
RAB40A-202ENST00000372633 UHRF1BP1LA0JNW5 1464 aa17.47■□□□□ 0.39
RAB40A-202ENST00000372633 MROH1Q8NDA8 1641 aa17.47■□□□□ 0.39
RAB40A-202ENST00000372633 FSD2A1L4K1 749 aa17.46■□□□□ 0.39
RAB40A-202ENST00000372633 TNNQ9UQP3 1299 aa17.46■□□□□ 0.39
RAB40A-202ENST00000372633 ZNF518AQ6AHZ1 1483 aa17.46■□□□□ 0.39
RAB40A-202ENST00000372633 NSD3Q9BZ95 1437 aa17.46■□□□□ 0.39
RAB40A-202ENST00000372633 AFAP1Q8N556 730 aa17.45■□□□□ 0.38
RAB40A-202ENST00000372633 RRAGDQ9NQL2 400 aaPredicted RBP17.45■□□□□ 0.38
RAB40A-202ENST00000372633 UGGT1Q9NYU2 1555 aa17.45■□□□□ 0.38
RAB40A-202ENST00000372633 MROH2AA6NES4 1674 aa17.45■□□□□ 0.38
RAB40A-202ENST00000372633 ATP7AQ04656 1500 aa17.44■□□□□ 0.38
RAB40A-202ENST00000372633 MORC1Q86VD1 984 aa17.44■□□□□ 0.38
RAB40A-202ENST00000372633 EIF5BO60841 1220 aaKnown RBP17.43■□□□□ 0.38
RAB40A-202ENST00000372633 RRP7AQ9Y3A4 280 aaKnown RBP17.43■□□□□ 0.38
RAB40A-202ENST00000372633 ADGRB2O60241 1585 aa17.43■□□□□ 0.38
RAB40A-202ENST00000372633 MCM4P33991 863 aa17.43■□□□□ 0.38
RAB40A-202ENST00000372633 MVPQ14764 893 aaKnown RBP17.43■□□□□ 0.38
RAB40A-202ENST00000372633 ADGRL1O94910 1474 aa17.42■□□□□ 0.38
RAB40A-202ENST00000372633 NEUROD2Q15784 382 aa17.42■□□□□ 0.38
RAB40A-202ENST00000372633 EFCAB6Q5THR3 1501 aa17.42■□□□□ 0.38
RAB40A-202ENST00000372633 QRICH2Q9H0J4 1663 aa17.41■□□□□ 0.38
RAB40A-202ENST00000372633 XRCC6P12956 609 aaKnown RBP eCLIP17.41■□□□□ 0.38
RAB40A-202ENST00000372633 MYH16Q9H6N6 1097 aa17.41■□□□□ 0.38
RAB40A-202ENST00000372633 CT47B1P0C2W7 299 aaPredicted RBP17.4■□□□□ 0.38
RAB40A-202ENST00000372633 ADGRB3O60242 1522 aa17.39■□□□□ 0.37
RAB40A-202ENST00000372633 GOLGA6L3A6NEY3 463 aa17.39■□□□□ 0.37
RAB40A-202ENST00000372633 BCL2L13Q9BXK5 485 aa17.39■□□□□ 0.37
RAB40A-202ENST00000372633 CHMP5Q9NZZ3 219 aa17.39■□□□□ 0.37
RAB40A-202ENST00000372633 ABCA9Q8IUA7 1624 aa17.39■□□□□ 0.37
RAB40A-202ENST00000372633 HDAC1Q13547 482 aaPredicted RBP17.38■□□□□ 0.37
RAB40A-202ENST00000372633 C22orf23Q9BZE7 217 aa17.38■□□□□ 0.37
RAB40A-202ENST00000372633 MTHFSP49914 203 aa17.38■□□□□ 0.37
RAB40A-202ENST00000372633 ZKSCAN2Q63HK3 967 aa17.38■□□□□ 0.37
RAB40A-202ENST00000372633 FANCAO15360 1455 aa17.38■□□□□ 0.37
RAB40A-202ENST00000372633 ADGRB1O14514 1584 aa17.37■□□□□ 0.37
RAB40A-202ENST00000372633 SLC12A5Q9H2X9 1139 aa17.37■□□□□ 0.37
RAB40A-202ENST00000372633 PPRC1Q5VV67 1664 aaKnown RBP17.37■□□□□ 0.37
RAB40A-202ENST00000372633 LMTK2Q8IWU2 1503 aa17.37■□□□□ 0.37
RAB40A-202ENST00000372633 KIF3BO15066 747 aa17.37■□□□□ 0.37
RAB40A-202ENST00000372633 DZIP1LQ8IYY4 767 aaKnown RBP17.36■□□□□ 0.37
RAB40A-202ENST00000372633 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
RAB40A-202ENST00000372633 PPLO60437 1756 aa17.36■□□□□ 0.37
RAB40A-202ENST00000372633 NCOA3Q9Y6Q9 1424 aa17.36■□□□□ 0.37
RAB40A-202ENST00000372633 NOS1P29475 1434 aa17.35■□□□□ 0.37
RAB40A-202ENST00000372633 TNNT2P45379 298 aaPredicted RBP17.35■□□□□ 0.37
RAB40A-202ENST00000372633 ZNF692Q9BU19 519 aaPredicted RBP17.35■□□□□ 0.37
RAB40A-202ENST00000372633 NSD2O96028 1365 aa17.35■□□□□ 0.37
RAB40A-202ENST00000372633 PUS7Q96PZ0 661 aaKnown RBP17.34■□□□□ 0.37
RAB40A-202ENST00000372633 TRAK2O60296 914 aa17.34■□□□□ 0.37
RAB40A-202ENST00000372633 C14orf93Q9H972 538 aaKnown RBP17.34■□□□□ 0.37
RAB40A-202ENST00000372633 CLCN1P35523 988 aa17.33■□□□□ 0.37
RAB40A-202ENST00000372633 DDIT3P35638 169 aa17.33■□□□□ 0.37
RAB40A-202ENST00000372633 SMC5Q8IY18 1101 aa17.33■□□□□ 0.36
RAB40A-202ENST00000372633 FTSJ3Q8IY81 847 aaKnown RBP17.32■□□□□ 0.36
RAB40A-202ENST00000372633 MRE11P49959 708 aa17.32■□□□□ 0.36
RAB40A-202ENST00000372633 ISY1Q9ULR0 285 aaKnown RBP17.32■□□□□ 0.36
RAB40A-202ENST00000372633 DDX19BQ9UMR2 479 aa17.31■□□□□ 0.36
RAB40A-202ENST00000372633 MFAP1P55081 439 aaKnown RBP17.31■□□□□ 0.36
RAB40A-202ENST00000372633 SPRYD3Q8NCJ5 442 aa17.31■□□□□ 0.36
RAB40A-202ENST00000372633 PANK2Q9BZ23 570 aa17.31■□□□□ 0.36
RAB40A-202ENST00000372633 TRIM27P14373 513 aa17.3■□□□□ 0.36
RAB40A-202ENST00000372633 TRAK1Q9UPV9 953 aa17.3■□□□□ 0.36
RAB40A-202ENST00000372633 DDX11L8A8MPP1 907 aa17.3■□□□□ 0.36
RAB40A-202ENST00000372633 RBM25P49756 843 aaKnown RBP17.3■□□□□ 0.36
RAB40A-202ENST00000372633 ANKRD36BQ8N2N9 1353 aa17.3■□□□□ 0.36
RAB40A-202ENST00000372633 SNX21Q969T3 373 aa17.29■□□□□ 0.36
RAB40A-202ENST00000372633 PLEKHF1Q96S99 279 aa17.28■□□□□ 0.36
RAB40A-202ENST00000372633 CD109Q6YHK3 1445 aa17.28■□□□□ 0.36
RAB40A-202ENST00000372633 KIDINS220Q9ULH0 1771 aa17.28■□□□□ 0.36
RAB40A-202ENST00000372633 U2AF1L5P0DN76 240 aaPredicted RBP17.28■□□□□ 0.36
RAB40A-202ENST00000372633 U2AF1Q01081 240 aaKnown RBP eCLIP17.28■□□□□ 0.36
RAB40A-202ENST00000372633 ATF7IPQ6VMQ6 1270 aa17.28■□□□□ 0.36
RAB40A-202ENST00000372633 HSCBQ8IWL3 235 aa17.28■□□□□ 0.36
RAB40A-202ENST00000372633 GZF1Q9H116 711 aaPredicted RBP17.28■□□□□ 0.36
RAB40A-202ENST00000372633 SMC4Q9NTJ3 1288 aa17.27■□□□□ 0.36
RAB40A-202ENST00000372633 IL16Q14005 1332 aa17.27■□□□□ 0.36
RAB40A-202ENST00000372633 TULP4Q9NRJ4 1543 aa17.27■□□□□ 0.35
RAB40A-202ENST00000372633 EXOSC9Q06265 439 aaKnown RBP17.27■□□□□ 0.35
RAB40A-202ENST00000372633 SSH1Q8WYL5 1049 aa17.27■□□□□ 0.35
RAB40A-202ENST00000372633 ZBTB40Q9NUA8 1239 aa17.27■□□□□ 0.35
RAB40A-202ENST00000372633 TSR2Q969E8 191 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms