RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 MSH6P52701 1360 aa23.09■■□□□ 1.29
TMEM53-203ENST00000372242 MINK1Q8N4C8 1332 aaPredicted RBP23.09■■□□□ 1.29
TMEM53-203ENST00000372242 C19orf44Q9H6X5 657 aa23.09■■□□□ 1.29
TMEM53-203ENST00000372242 EIF3AQ14152 1382 aaKnown RBP23.09■■□□□ 1.29
TMEM53-203ENST00000372242 USP47Q96K76 1375 aa23.08■■□□□ 1.29
TMEM53-203ENST00000372242 ZEB1P37275 1124 aaPredicted RBP23.07■■□□□ 1.28
TMEM53-203ENST00000372242 QRICH2Q9H0J4 1663 aa23.06■■□□□ 1.28
TMEM53-203ENST00000372242 IQSEC2Q5JU85 1478 aa23.06■■□□□ 1.28
TMEM53-203ENST00000372242 ST20-MTHFSA0A0A6YYL1 179 aa23.05■■□□□ 1.28
TMEM53-203ENST00000372242 ATF3P18847 181 aa23.03■■□□□ 1.28
TMEM53-203ENST00000372242 NUTM2FA1L443 756 aa23.01■■□□□ 1.27
TMEM53-203ENST00000372242 CADPS2Q86UW7 1296 aa23.01■■□□□ 1.27
TMEM53-203ENST00000372242 DCCP43146 1447 aa23■■□□□ 1.27
TMEM53-203ENST00000372242 CDC42BPGQ6DT37 1551 aa23■■□□□ 1.27
TMEM53-203ENST00000372242 UBAP1LF5GYI3 381 aa23■■□□□ 1.27
TMEM53-203ENST00000372242 EIF4G2P78344 907 aaKnown RBP eCLIP23■■□□□ 1.27
TMEM53-203ENST00000372242 HSPA5P11021 654 aaKnown RBP22.99■■□□□ 1.27
TMEM53-203ENST00000372242 ADGRB2O60241 1585 aa22.99■■□□□ 1.27
TMEM53-203ENST00000372242 WASLO00401 505 aaPredicted RBP22.97■■□□□ 1.27
TMEM53-203ENST00000372242 TOM1O60784 492 aa22.97■■□□□ 1.27
TMEM53-203ENST00000372242 TESK2Q96S53 571 aa22.97■■□□□ 1.27
TMEM53-203ENST00000372242 SLAIN2Q9P270 581 aa22.96■■□□□ 1.27
TMEM53-203ENST00000372242 CDK19Q9BWU1 502 aa22.96■■□□□ 1.27
TMEM53-203ENST00000372242 TULP4Q9NRJ4 1543 aa22.95■■□□□ 1.26
TMEM53-203ENST00000372242 FMN2Q9NZ56 1722 aa22.95■■□□□ 1.26
TMEM53-203ENST00000372242 MST1RQ04912 1400 aa22.95■■□□□ 1.26
TMEM53-203ENST00000372242 SBNO2Q9Y2G9 1366 aa22.95■■□□□ 1.26
TMEM53-203ENST00000372242 PIP4K2BP78356 416 aa22.94■■□□□ 1.26
TMEM53-203ENST00000372242 EVC2Q86UK5 1308 aa22.92■■□□□ 1.26
TMEM53-203ENST00000372242 SCAF1Q9H7N4 1312 aaKnown RBP22.92■■□□□ 1.26
TMEM53-203ENST00000372242 SRPK2P78362 688 aaKnown RBP22.92■■□□□ 1.26
TMEM53-203ENST00000372242 CABP2Q9NPB3 220 aa22.92■■□□□ 1.26
TMEM53-203ENST00000372242 C1orf167Q5SNV9 1468 aa22.91■■□□□ 1.26
TMEM53-203ENST00000372242 RGPD8O14715 1765 aaPredicted RBP22.9■■□□□ 1.26
TMEM53-203ENST00000372242 PRR36Q9H6K5 1346 aa22.9■■□□□ 1.26
TMEM53-203ENST00000372242 USP32Q8NFA0 1604 aa22.9■■□□□ 1.26
TMEM53-203ENST00000372242 ORAI2Q96SN7 254 aa22.89■■□□□ 1.25
TMEM53-203ENST00000372242 DISP3Q9P2K9 1392 aa22.88■■□□□ 1.25
TMEM53-203ENST00000372242 ESCO1Q5FWF5 840 aa22.87■■□□□ 1.25
TMEM53-203ENST00000372242 NUDT16Q96DE0 195 aaKnown RBP22.87■■□□□ 1.25
TMEM53-203ENST00000372242 TMF1P82094 1093 aa22.86■■□□□ 1.25
TMEM53-203ENST00000372242 BRINP3Q76B58 766 aa22.86■■□□□ 1.25
TMEM53-203ENST00000372242 ATP7BP35670 1465 aa22.86■■□□□ 1.25
TMEM53-203ENST00000372242 ROBO1Q9Y6N7 1651 aa22.86■■□□□ 1.25
TMEM53-203ENST00000372242 ANKARQ7Z5J8 1434 aa22.85■■□□□ 1.25
TMEM53-203ENST00000372242 SLC24A1O60721 1099 aa22.84■■□□□ 1.25
TMEM53-203ENST00000372242 PMFBP1Q8TBY8 1022 aa22.82■■□□□ 1.24
TMEM53-203ENST00000372242 C11orf95C9JLR9 678 aaPredicted RBP22.81■■□□□ 1.24
TMEM53-203ENST00000372242 FBXO41Q8TF61 875 aa22.81■■□□□ 1.24
TMEM53-203ENST00000372242 CCDC61Q9Y6R9 512 aa22.81■■□□□ 1.24
TMEM53-203ENST00000372242 DDX17Q92841 729 aaKnown RBP22.8■■□□□ 1.24
TMEM53-203ENST00000372242 PHF8Q9UPP1 1060 aa22.8■■□□□ 1.24
TMEM53-203ENST00000372242 ITSN1Q15811 1721 aa22.79■■□□□ 1.24
TMEM53-203ENST00000372242 TOPAZ1Q8N9V7 1692 aa22.79■■□□□ 1.24
TMEM53-203ENST00000372242 PPIP5K1Q6PFW1 1433 aa22.78■■□□□ 1.24
TMEM53-203ENST00000372242 FOXO3O43524 673 aa22.78■■□□□ 1.24
TMEM53-203ENST00000372242 POLR3GLQ9BT43 218 aa22.78■■□□□ 1.24
TMEM53-203ENST00000372242 CABP1Q9NZU7 370 aa22.78■■□□□ 1.24
TMEM53-203ENST00000372242 ATAD2Q6PL18 1390 aa22.78■■□□□ 1.24
TMEM53-203ENST00000372242 CDCA8Q53HL2 280 aa22.76■■□□□ 1.23
TMEM53-203ENST00000372242 TMC1Q8TDI8 760 aa22.75■■□□□ 1.23
TMEM53-203ENST00000372242 PUS7Q96PZ0 661 aaKnown RBP22.75■■□□□ 1.23
TMEM53-203ENST00000372242 KIF1AQ12756 1690 aa22.75■■□□□ 1.23
TMEM53-203ENST00000372242 XPCQ01831 940 aaPredicted RBP22.75■■□□□ 1.23
TMEM53-203ENST00000372242 NGDNQ8NEJ9 315 aaKnown RBP22.74■■□□□ 1.23
TMEM53-203ENST00000372242 SLC12A5Q9H2X9 1139 aa22.74■■□□□ 1.23
TMEM53-203ENST00000372242 PLEKHG3A1L390 1219 aa22.73■■□□□ 1.23
TMEM53-203ENST00000372242 ACEP12821 1306 aa22.73■■□□□ 1.23
TMEM53-203ENST00000372242 NHSL1Q5SYE7 1610 aa22.72■■□□□ 1.23
TMEM53-203ENST00000372242 KIF7Q2M1P5 1343 aa22.72■■□□□ 1.23
TMEM53-203ENST00000372242 NPHP3Q7Z494 1330 aa22.71■■□□□ 1.23
TMEM53-203ENST00000372242 HSPA1LP34931 641 aa22.71■■□□□ 1.23
TMEM53-203ENST00000372242 AHDC1Q5TGY3 1603 aaPredicted RBP22.7■■□□□ 1.22
TMEM53-203ENST00000372242 PSME1Q06323 249 aa22.7■■□□□ 1.22
TMEM53-203ENST00000372242 PHLPP1O60346 1717 aa22.69■■□□□ 1.22
TMEM53-203ENST00000372242 POLR3AO14802 1390 aaPredicted RBP22.69■■□□□ 1.22
TMEM53-203ENST00000372242 KRT28Q7Z3Y7 464 aa22.68■■□□□ 1.22
TMEM53-203ENST00000372242 MYOM1P52179 1685 aa22.68■■□□□ 1.22
TMEM53-203ENST00000372242 WASHC2AQ641Q2 1341 aa22.68■■□□□ 1.22
TMEM53-203ENST00000372242 PXDNQ92626 1479 aa22.67■■□□□ 1.22
TMEM53-203ENST00000372242 CD163L1Q9NR16 1453 aa22.66■■□□□ 1.22
TMEM53-203ENST00000372242 SOS2Q07890 1332 aaPredicted RBP22.66■■□□□ 1.22
TMEM53-203ENST00000372242 CCDC7Q96M83 1385 aa22.65■■□□□ 1.22
TMEM53-203ENST00000372242 COL16A1Q07092 1604 aaPredicted RBP22.65■■□□□ 1.22
TMEM53-203ENST00000372242 NINLQ9Y2I6 1382 aa22.65■■□□□ 1.22
TMEM53-203ENST00000372242 CPSF1Q10570 1443 aaKnown RBP22.64■■□□□ 1.21
TMEM53-203ENST00000372242 ILDR1Q86SU0 546 aaPredicted RBP22.64■■□□□ 1.21
TMEM53-203ENST00000372242 TERF2IPQ9NYB0 399 aa22.63■■□□□ 1.21
TMEM53-203ENST00000372242 A0A1W2PP64 1363 aa22.63■■□□□ 1.21
TMEM53-203ENST00000372242 AKAP12Q02952 1782 aa22.63■■□□□ 1.21
TMEM53-203ENST00000372242 KTN1Q86UP2 1357 aaKnown RBP22.62■■□□□ 1.21
TMEM53-203ENST00000372242 HDGFL2Q7Z4V5 671 aaPredicted RBP22.62■■□□□ 1.21
TMEM53-203ENST00000372242 USP6P35125 1406 aa22.62■■□□□ 1.21
TMEM53-203ENST00000372242 PAK3O75914 559 aaPredicted RBP22.61■■□□□ 1.21
TMEM53-203ENST00000372242 ZNF692Q9BU19 519 aaPredicted RBP22.61■■□□□ 1.21
TMEM53-203ENST00000372242 TRPM3Q9HCF6 1732 aaPredicted RBP22.6■■□□□ 1.21
TMEM53-203ENST00000372242 ANKRD36BQ8N2N9 1353 aa22.6■■□□□ 1.21
TMEM53-203ENST00000372242 LRRC59Q96AG4 307 aaKnown RBP22.59■■□□□ 1.21
TMEM53-203ENST00000372242 LMOD2Q6P5Q4 547 aa22.59■■□□□ 1.21
TMEM53-203ENST00000372242 MON2Q7Z3U7 1717 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms