RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 HSP90B2PQ58FF3 399 aa15.32■□□□□ 0.04
GPC4-201ENST00000370828 TERF2IPQ9NYB0 399 aa15.32■□□□□ 0.04
GPC4-201ENST00000370828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.31■□□□□ 0.04
GPC4-201ENST00000370828 TCP11L2Q8N4U5 519 aa15.31■□□□□ 0.04
GPC4-201ENST00000370828 LRRC9Q6ZRR7 1453 aa15.31■□□□□ 0.04
GPC4-201ENST00000370828 WASHC2CQ9Y4E1 1318 aa15.3■□□□□ 0.04
GPC4-201ENST00000370828 ZKSCAN1P17029 563 aaPredicted RBP15.3■□□□□ 0.04
GPC4-201ENST00000370828 NUTM2DQ5VT03 806 aaPredicted RBP15.3■□□□□ 0.04
GPC4-201ENST00000370828 TRERF1Q96PN7 1200 aa15.3■□□□□ 0.04
GPC4-201ENST00000370828 API5Q9BZZ5 524 aaKnown RBP15.3■□□□□ 0.04
GPC4-201ENST00000370828 C1orf115Q9H7X2 142 aa15.3■□□□□ 0.04
GPC4-201ENST00000370828 RRAGDQ9NQL2 400 aaPredicted RBP15.3■□□□□ 0.04
GPC4-201ENST00000370828 LETM1O95202 739 aaPredicted RBP15.29■□□□□ 0.04
GPC4-201ENST00000370828 GGT6Q6P531 493 aa15.29■□□□□ 0.04
GPC4-201ENST00000370828 RDXP35241 583 aaKnown RBP15.29■□□□□ 0.04
GPC4-201ENST00000370828 FOSBP53539 338 aa15.29■□□□□ 0.04
GPC4-201ENST00000370828 TNPO1Q92973 898 aaKnown RBP15.29■□□□□ 0.04
GPC4-201ENST00000370828 TDRD9Q8NDG6 1382 aaKnown RBP15.29■□□□□ 0.04
GPC4-201ENST00000370828 SKIDA1Q1XH10 827 aa15.29■□□□□ 0.04
GPC4-201ENST00000370828 PLCD3Q8N3E9 789 aa15.29■□□□□ 0.04
GPC4-201ENST00000370828 SPDYE4A6NLX3 237 aa15.28■□□□□ 0.04
GPC4-201ENST00000370828 CWC22Q9HCG8 908 aaKnown RBP15.28■□□□□ 0.04
GPC4-201ENST00000370828 DNAJC2Q99543 621 aaKnown RBP15.28■□□□□ 0.04
GPC4-201ENST00000370828 PPP4R3BQ5MIZ7 849 aa15.27■□□□□ 0.03
GPC4-201ENST00000370828 ARAP1Q96P48 1450 aa15.27■□□□□ 0.03
GPC4-201ENST00000370828 CCDC73Q6ZRK6 1079 aa15.27■□□□□ 0.03
GPC4-201ENST00000370828 EXOSC9Q06265 439 aaKnown RBP15.26■□□□□ 0.03
GPC4-201ENST00000370828 SSFA2P28290 1259 aa15.26■□□□□ 0.03
GPC4-201ENST00000370828 ZNF644Q9H582 1327 aaPredicted RBP15.26■□□□□ 0.03
GPC4-201ENST00000370828 LEKR1Q6ZMV7 388 aa15.25■□□□□ 0.03
GPC4-201ENST00000370828 TPM1P09493 284 aa15.25■□□□□ 0.03
GPC4-201ENST00000370828 RUFY2Q8WXA3 655 aa15.25■□□□□ 0.03
GPC4-201ENST00000370828 H0YHG0 523 aa15.25■□□□□ 0.03
GPC4-201ENST00000370828 RASSF8Q8NHQ8 419 aa15.25■□□□□ 0.03
GPC4-201ENST00000370828 TSR1Q2NL82 804 aaKnown RBP15.24■□□□□ 0.03
GPC4-201ENST00000370828 CCDC70Q6NSX1 233 aa15.24■□□□□ 0.03
GPC4-201ENST00000370828 PLCD4Q9BRC7 762 aa15.24■□□□□ 0.03
GPC4-201ENST00000370828 CHMP4AQ9BY43 222 aa15.24■□□□□ 0.03
GPC4-201ENST00000370828 DYNC1I1O14576 645 aa15.24■□□□□ 0.03
GPC4-201ENST00000370828 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.24■□□□□ 0.03
GPC4-201ENST00000370828 TSR2Q969E8 191 aaKnown RBP15.24■□□□□ 0.03
GPC4-201ENST00000370828 FAM193AP78312 1265 aa15.24■□□□□ 0.03
GPC4-201ENST00000370828 USP8P40818 1118 aa15.24■□□□□ 0.03
GPC4-201ENST00000370828 FMNL2Q96PY5 1086 aa15.24■□□□□ 0.03
GPC4-201ENST00000370828 ACBD3Q9H3P7 528 aa15.24■□□□□ 0.03
GPC4-201ENST00000370828 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.23■□□□□ 0.03
GPC4-201ENST00000370828 MYOM3Q5VTT5 1437 aa15.23■□□□□ 0.03
GPC4-201ENST00000370828 MIA2Q96PC5 1412 aa15.23■□□□□ 0.03
GPC4-201ENST00000370828 CCDC192P0DO97 292 aa15.23■□□□□ 0.03
GPC4-201ENST00000370828 MVPQ14764 893 aaKnown RBP15.23■□□□□ 0.03
GPC4-201ENST00000370828 SDF4Q9BRK5 362 aa15.23■□□□□ 0.03
GPC4-201ENST00000370828 NOB1Q9ULX3 412 aaKnown RBP15.23■□□□□ 0.03
GPC4-201ENST00000370828 KIF3BO15066 747 aa15.22■□□□□ 0.03
GPC4-201ENST00000370828 DIAPH1O60610 1272 aaKnown RBP15.22■□□□□ 0.03
GPC4-201ENST00000370828 MCM2P49736 904 aa15.22■□□□□ 0.03
GPC4-201ENST00000370828 DHX37Q8IY37 1157 aaKnown RBP15.22■□□□□ 0.03
GPC4-201ENST00000370828 SMC2O95347 1197 aa15.22■□□□□ 0.03
GPC4-201ENST00000370828 NBPF1Q3BBV0 1214 aa15.22■□□□□ 0.03
GPC4-201ENST00000370828 PDILTQ8N807 584 aa15.22■□□□□ 0.03
GPC4-201ENST00000370828 AK7Q96M32 723 aa15.22■□□□□ 0.03
GPC4-201ENST00000370828 NECTIN2Q92692 538 aa15.21■□□□□ 0.03
GPC4-201ENST00000370828 SLFN5Q08AF3 891 aa15.21■□□□□ 0.03
GPC4-201ENST00000370828 MEX3CQ5U5Q3 659 aaKnown RBP15.21■□□□□ 0.03
GPC4-201ENST00000370828 CALCOCO1Q9P1Z2 691 aa15.21■□□□□ 0.03
GPC4-201ENST00000370828 CHD1LQ86WJ1 897 aa15.21■□□□□ 0.03
GPC4-201ENST00000370828 MTHFSP49914 203 aa15.21■□□□□ 0.02
GPC4-201ENST00000370828 GCC1Q96CN9 775 aa15.2■□□□□ 0.02
GPC4-201ENST00000370828 BCCIPQ9P287 314 aaKnown RBP eCLIP15.2■□□□□ 0.02
GPC4-201ENST00000370828 IPO4Q8TEX9 1081 aaKnown RBP15.2■□□□□ 0.02
GPC4-201ENST00000370828 HDAC5Q9UQL6 1122 aa15.2■□□□□ 0.02
GPC4-201ENST00000370828 TTLL5Q6EMB2 1281 aa15.19■□□□□ 0.02
GPC4-201ENST00000370828 USP25Q9UHP3 1055 aa15.19■□□□□ 0.02
GPC4-201ENST00000370828 NAT10Q9H0A0 1025 aaKnown RBP15.19■□□□□ 0.02
GPC4-201ENST00000370828 WDR33Q9C0J8 1336 aaKnown RBP15.19■□□□□ 0.02
GPC4-201ENST00000370828 RUFY1Q96T51 708 aa15.18■□□□□ 0.02
GPC4-201ENST00000370828 FILIP1Q7Z7B0 1213 aa15.18■□□□□ 0.02
GPC4-201ENST00000370828 TOMM22Q9NS69 142 aa15.18■□□□□ 0.02
GPC4-201ENST00000370828 PDS5BQ9NTI5 1447 aa15.18■□□□□ 0.02
GPC4-201ENST00000370828 TBC1D32Q96NH3 1257 aa15.18■□□□□ 0.02
GPC4-201ENST00000370828 FAM177A1Q8N128 213 aaPredicted RBP15.17■□□□□ 0.02
GPC4-201ENST00000370828 ROCK1Q13464 1354 aa15.17■□□□□ 0.02
GPC4-201ENST00000370828 IPO7O95373 1038 aaKnown RBP15.17■□□□□ 0.02
GPC4-201ENST00000370828 TNMDQ9H2S6 317 aa15.17■□□□□ 0.02
GPC4-201ENST00000370828 RNF20Q5VTR2 975 aa15.17■□□□□ 0.02
GPC4-201ENST00000370828 IGSF3O75054 1194 aa15.17■□□□□ 0.02
GPC4-201ENST00000370828 IGHDP01880 384 aa15.17■□□□□ 0.02
GPC4-201ENST00000370828 HMOX1P09601 288 aa15.17■□□□□ 0.02
GPC4-201ENST00000370828 CEBPZQ03701 1054 aaKnown RBP15.17■□□□□ 0.02
GPC4-201ENST00000370828 C8orf34Q49A92 452 aa15.17■□□□□ 0.02
GPC4-201ENST00000370828 ATF7IPQ6VMQ6 1270 aa15.17■□□□□ 0.02
GPC4-201ENST00000370828 PAIP2Q9BPZ3 127 aaKnown RBP15.17■□□□□ 0.02
GPC4-201ENST00000370828 PSMD1Q99460 953 aa15.16■□□□□ 0.02
GPC4-201ENST00000370828 RBM27Q9P2N5 1060 aaKnown RBP15.16■□□□□ 0.02
GPC4-201ENST00000370828 IFIT2P09913 472 aaKnown RBP15.16■□□□□ 0.02
GPC4-201ENST00000370828 NINLQ9Y2I6 1382 aa15.16■□□□□ 0.02
GPC4-201ENST00000370828 ERC2O15083 957 aa15.16■□□□□ 0.02
GPC4-201ENST00000370828 GNAI1P63096 354 aa15.16■□□□□ 0.02
GPC4-201ENST00000370828 FKBP5Q13451 457 aaPredicted RBP15.16■□□□□ 0.02
GPC4-201ENST00000370828 GPATCH11Q8N954 259 aa15.16■□□□□ 0.02
GPC4-201ENST00000370828 KINO60870 393 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms