RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 KIF6Q6ZMV9 814 aa10.41□□□□□ -0.74
ABCA4-201ENST00000370225 DDX19BQ9UMR2 479 aa10.41□□□□□ -0.74
ABCA4-201ENST00000370225 BICD2Q8TD16 824 aa10.41□□□□□ -0.74
ABCA4-201ENST00000370225 RUNDC1Q96C34 613 aa10.41□□□□□ -0.74
ABCA4-201ENST00000370225 DNAJC2Q99543 621 aaKnown RBP10.41□□□□□ -0.74
ABCA4-201ENST00000370225 FGD5Q6ZNL6 1462 aa10.4□□□□□ -0.74
ABCA4-201ENST00000370225 GPRASP1Q5JY77 1395 aa10.4□□□□□ -0.74
ABCA4-201ENST00000370225 LNPKQ9C0E8 428 aa10.4□□□□□ -0.74
ABCA4-201ENST00000370225 CCAR1Q8IX12 1150 aaKnown RBP10.4□□□□□ -0.74
ABCA4-201ENST00000370225 XPCQ01831 940 aaPredicted RBP10.4□□□□□ -0.75
ABCA4-201ENST00000370225 AFAP1Q8N556 730 aa10.4□□□□□ -0.75
ABCA4-201ENST00000370225 API5Q9BZZ5 524 aaKnown RBP10.39□□□□□ -0.75
ABCA4-201ENST00000370225 PRKRIP1Q9H875 184 aaPredicted RBP10.39□□□□□ -0.75
ABCA4-201ENST00000370225 CCDC47Q96A33 483 aaKnown RBP10.39□□□□□ -0.75
ABCA4-201ENST00000370225 ATP6V1DQ9Y5K8 247 aa10.39□□□□□ -0.75
ABCA4-201ENST00000370225 DDX11L8A8MPP1 907 aa10.39□□□□□ -0.75
ABCA4-201ENST00000370225 ATP2B2Q01814 1243 aa10.39□□□□□ -0.75
ABCA4-201ENST00000370225 RNF20Q5VTR2 975 aa10.39□□□□□ -0.75
ABCA4-201ENST00000370225 UBTFL1P0CB47 393 aaPredicted RBP10.39□□□□□ -0.75
ABCA4-201ENST00000370225 REC8O95072 547 aa10.39□□□□□ -0.75
ABCA4-201ENST00000370225 TMEM132AQ24JP5 1023 aa10.39□□□□□ -0.75
ABCA4-201ENST00000370225 PDE4AP27815 886 aa10.38□□□□□ -0.75
ABCA4-201ENST00000370225 RALYLQ86SE5 291 aaKnown RBP10.38□□□□□ -0.75
ABCA4-201ENST00000370225 PANK1Q8TE04 598 aa10.38□□□□□ -0.75
ABCA4-201ENST00000370225 TOM1L2Q6ZVM7 507 aa10.38□□□□□ -0.75
ABCA4-201ENST00000370225 GNAI1P63096 354 aa10.38□□□□□ -0.75
ABCA4-201ENST00000370225 RRP12Q5JTH9 1297 aaKnown RBP10.38□□□□□ -0.75
ABCA4-201ENST00000370225 NAP1L1P55209 391 aaKnown RBP10.38□□□□□ -0.75
ABCA4-201ENST00000370225 MIA2Q96PC5 1412 aa10.38□□□□□ -0.75
ABCA4-201ENST00000370225 ROCK1Q13464 1354 aa10.38□□□□□ -0.75
ABCA4-201ENST00000370225 PRAM1Q96QH2 718 aa10.37□□□□□ -0.75
ABCA4-201ENST00000370225 CHMP4CQ96CF2 233 aa10.37□□□□□ -0.75
ABCA4-201ENST00000370225 ERC2O15083 957 aa10.37□□□□□ -0.75
ABCA4-201ENST00000370225 TNNT3P45378 269 aaPredicted RBP10.37□□□□□ -0.75
ABCA4-201ENST00000370225 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.37□□□□□ -0.75
ABCA4-201ENST00000370225 MYL6BP14649 208 aa10.36□□□□□ -0.75
ABCA4-201ENST00000370225 CNNM1Q9NRU3 951 aa10.36□□□□□ -0.75
ABCA4-201ENST00000370225 RBM5P52756 815 aaKnown RBP eCLIP10.36□□□□□ -0.75
ABCA4-201ENST00000370225 SMC3Q9UQE7 1217 aa10.36□□□□□ -0.75
ABCA4-201ENST00000370225 C1orf115Q9H7X2 142 aa10.36□□□□□ -0.75
ABCA4-201ENST00000370225 FSD1Q9BTV5 496 aa10.36□□□□□ -0.75
ABCA4-201ENST00000370225 TSHZ2Q9NRE2 1034 aa10.36□□□□□ -0.75
ABCA4-201ENST00000370225 SAFBQ15424 915 aaKnown RBP eCLIP10.35□□□□□ -0.75
ABCA4-201ENST00000370225 MTHFSP49914 203 aa10.35□□□□□ -0.75
ABCA4-201ENST00000370225 ANKRD20A12PQ8NF67 263 aa10.35□□□□□ -0.75
ABCA4-201ENST00000370225 ATP2B1P20020 1258 aa10.35□□□□□ -0.75
ABCA4-201ENST00000370225 CABP4P57796 275 aa10.35□□□□□ -0.75
ABCA4-201ENST00000370225 CFAP70Q5T0N1 1121 aa10.35□□□□□ -0.75
ABCA4-201ENST00000370225 CT47A1Q5JQC4 288 aaPredicted RBP10.35□□□□□ -0.75
ABCA4-201ENST00000370225 ZFYVE27Q5T4F4 411 aa10.35□□□□□ -0.75
ABCA4-201ENST00000370225 BICDL1Q6ZP65 573 aa10.35□□□□□ -0.75
ABCA4-201ENST00000370225 R3HCC1Q9Y3T6 440 aaKnown RBP10.35□□□□□ -0.75
ABCA4-201ENST00000370225 SIL1Q9H173 461 aa10.35□□□□□ -0.75
ABCA4-201ENST00000370225 EPS15P42566 896 aa10.34□□□□□ -0.75
ABCA4-201ENST00000370225 INTS3Q68E01 1043 aaKnown RBP10.34□□□□□ -0.75
ABCA4-201ENST00000370225 HOOK1Q9UJC3 728 aaKnown RBP10.34□□□□□ -0.75
ABCA4-201ENST00000370225 MYOM3Q5VTT5 1437 aa10.34□□□□□ -0.75
ABCA4-201ENST00000370225 SPINK5Q9NQ38 1064 aaPredicted RBP10.34□□□□□ -0.75
ABCA4-201ENST00000370225 SMG6Q86US8 1419 aaKnown RBP10.34□□□□□ -0.75
ABCA4-201ENST00000370225 TTC39AQ5SRH9 613 aa10.34□□□□□ -0.75
ABCA4-201ENST00000370225 IPO7O95373 1038 aaKnown RBP10.34□□□□□ -0.75
ABCA4-201ENST00000370225 PLEKHO1Q53GL0 409 aaPredicted RBP10.34□□□□□ -0.75
ABCA4-201ENST00000370225 MAP4K4O95819 1239 aaPredicted RBP10.34□□□□□ -0.75
ABCA4-201ENST00000370225 TATP17735 454 aaPredicted RBP10.33□□□□□ -0.76
ABCA4-201ENST00000370225 ODF2Q5BJF6 829 aa10.33□□□□□ -0.76
ABCA4-201ENST00000370225 TBC1D2BQ9UPU7 963 aa10.33□□□□□ -0.76
ABCA4-201ENST00000370225 HSP90AB4PQ58FF6 505 aa10.33□□□□□ -0.76
ABCA4-201ENST00000370225 CCDC70Q6NSX1 233 aa10.33□□□□□ -0.76
ABCA4-201ENST00000370225 SURF6O75683 361 aaKnown RBP10.33□□□□□ -0.76
ABCA4-201ENST00000370225 HOMER1Q86YM7 354 aa10.33□□□□□ -0.76
ABCA4-201ENST00000370225 SLC26A8Q96RN1 970 aa10.33□□□□□ -0.76
ABCA4-201ENST00000370225 CCDC30Q5VVM6 783 aa10.33□□□□□ -0.76
ABCA4-201ENST00000370225 BRMS1Q9HCU9 246 aa10.33□□□□□ -0.76
ABCA4-201ENST00000370225 IBSPP21815 317 aaPredicted RBP10.33□□□□□ -0.76
ABCA4-201ENST00000370225 PRKAR2BP31323 418 aa10.33□□□□□ -0.76
ABCA4-201ENST00000370225 CDK19Q9BWU1 502 aa10.32□□□□□ -0.76
ABCA4-201ENST00000370225 SASS6Q6UVJ0 657 aa10.32□□□□□ -0.76
ABCA4-201ENST00000370225 ZBED9Q6R2W3 1325 aa10.32□□□□□ -0.76
ABCA4-201ENST00000370225 TTLL5Q6EMB2 1281 aa10.31□□□□□ -0.76
ABCA4-201ENST00000370225 CNTROBQ8N137 903 aa10.31□□□□□ -0.76
ABCA4-201ENST00000370225 NINLQ9Y2I6 1382 aa10.31□□□□□ -0.76
ABCA4-201ENST00000370225 PDILTQ8N807 584 aa10.31□□□□□ -0.76
ABCA4-201ENST00000370225 CCDC85AQ96PX6 553 aaPredicted RBP10.3□□□□□ -0.76
ABCA4-201ENST00000370225 ADAMTS8Q9UP79 889 aa10.3□□□□□ -0.76
ABCA4-201ENST00000370225 KIF7Q2M1P5 1343 aa10.3□□□□□ -0.76
ABCA4-201ENST00000370225 GAS2L2Q8NHY3 880 aa10.3□□□□□ -0.76
ABCA4-201ENST00000370225 WASHC2AQ641Q2 1341 aa10.3□□□□□ -0.76
ABCA4-201ENST00000370225 SULT6B1Q6IMI4 303 aa10.3□□□□□ -0.76
ABCA4-201ENST00000370225 PRG4Q92954 1404 aaPredicted RBP10.3□□□□□ -0.76
ABCA4-201ENST00000370225 RAPGEF3O95398 923 aa10.3□□□□□ -0.76
ABCA4-201ENST00000370225 CEBPZQ03701 1054 aaKnown RBP10.3□□□□□ -0.76
ABCA4-201ENST00000370225 CABP1Q9NZU7 370 aa10.3□□□□□ -0.76
ABCA4-201ENST00000370225 ANKRD50Q9ULJ7 1429 aa10.3□□□□□ -0.76
ABCA4-201ENST00000370225 PAF1Q8N7H5 531 aa10.29□□□□□ -0.76
ABCA4-201ENST00000370225 TSR2Q969E8 191 aaKnown RBP10.29□□□□□ -0.76
ABCA4-201ENST00000370225 XBP1P17861 261 aa10.29□□□□□ -0.76
ABCA4-201ENST00000370225 CCDC73Q6ZRK6 1079 aa10.29□□□□□ -0.76
ABCA4-201ENST00000370225 CUX1P39880 1505 aa10.29□□□□□ -0.76
ABCA4-201ENST00000370225 SART3Q15020 963 aaKnown RBP10.29□□□□□ -0.76
ABCA4-201ENST00000370225 RRS1Q15050 365 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms