RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 TMEM132AQ24JP5 1023 aa15.25■□□□□ 0.03
TMEM56-201ENST00000370203 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.25■□□□□ 0.032e-7■■■■■ 66.1
TMEM56-201ENST00000370203 DDX11L8A8MPP1 907 aa15.25■□□□□ 0.03
TMEM56-201ENST00000370203 TPM1P09493 284 aa15.25■□□□□ 0.03
TMEM56-201ENST00000370203 SIL1Q9H173 461 aa15.25■□□□□ 0.03
TMEM56-201ENST00000370203 CEBPZQ03701 1054 aaKnown RBP15.24■□□□□ 0.03
TMEM56-201ENST00000370203 TXNDC2Q86VQ3 553 aa15.24■□□□□ 0.03
TMEM56-201ENST00000370203 PDE3BQ13370 1112 aa15.24■□□□□ 0.03
TMEM56-201ENST00000370203 HOMER1Q86YM7 354 aa15.24■□□□□ 0.03
TMEM56-201ENST00000370203 CPLX2Q6PUV4 134 aaKnown RBP15.24■□□□□ 0.03
TMEM56-201ENST00000370203 MYL6BP14649 208 aa15.23■□□□□ 0.03
TMEM56-201ENST00000370203 SMC3Q9UQE7 1217 aa15.23■□□□□ 0.03
TMEM56-201ENST00000370203 BICDL1Q6ZP65 573 aa15.22■□□□□ 0.03
TMEM56-201ENST00000370203 DDX19BQ9UMR2 479 aa15.22■□□□□ 0.03
TMEM56-201ENST00000370203 RSPH4AQ5TD94 716 aa15.22■□□□□ 0.03
TMEM56-201ENST00000370203 PDILTQ8N807 584 aa15.22■□□□□ 0.03
TMEM56-201ENST00000370203 UACAQ9BZF9 1416 aa15.22■□□□□ 0.03
TMEM56-201ENST00000370203 CCDC85AQ96PX6 553 aaPredicted RBP15.22■□□□□ 0.03
TMEM56-201ENST00000370203 UBTFL1P0CB47 393 aaPredicted RBP15.21■□□□□ 0.03
TMEM56-201ENST00000370203 PHLDB1Q86UU1 1377 aa15.21■□□□□ 0.03
TMEM56-201ENST00000370203 RUNDC1Q96C34 613 aa15.21■□□□□ 0.03
TMEM56-201ENST00000370203 FSD1Q9BTV5 496 aa15.21■□□□□ 0.03
TMEM56-201ENST00000370203 RALYLQ86SE5 291 aaKnown RBP15.2■□□□□ 0.02
TMEM56-201ENST00000370203 PROSER2Q86WR7 435 aaPredicted RBP15.2■□□□□ 0.02
TMEM56-201ENST00000370203 LRRFIP1Q32MZ4 808 aaKnown RBP15.2■□□□□ 0.02
TMEM56-201ENST00000370203 CT47A1Q5JQC4 288 aaPredicted RBP15.2■□□□□ 0.02
TMEM56-201ENST00000370203 CADPSQ9ULU8 1353 aa15.2■□□□□ 0.02
TMEM56-201ENST00000370203 RBM5P52756 815 aaKnown RBP eCLIP15.2■□□□□ 0.02
TMEM56-201ENST00000370203 STK3Q13188 491 aa15.2■□□□□ 0.02
TMEM56-201ENST00000370203 PIBF1Q8WXW3 757 aa15.19■□□□□ 0.02
TMEM56-201ENST00000370203 CCAR1Q8IX12 1150 aaKnown RBP15.19■□□□□ 0.02
TMEM56-201ENST00000370203 REC8O95072 547 aa15.19■□□□□ 0.02
TMEM56-201ENST00000370203 DHX57Q6P158 1386 aaKnown RBP15.19■□□□□ 0.02
TMEM56-201ENST00000370203 CCDC47Q96A33 483 aaKnown RBP15.19■□□□□ 0.02
TMEM56-201ENST00000370203 AFAP1Q8N556 730 aa15.18■□□□□ 0.02
TMEM56-201ENST00000370203 ATP6V1DQ9Y5K8 247 aa15.18■□□□□ 0.02
TMEM56-201ENST00000370203 API5Q9BZZ5 524 aaKnown RBP15.18■□□□□ 0.02
TMEM56-201ENST00000370203 MTHFSP49914 203 aa15.18■□□□□ 0.02
TMEM56-201ENST00000370203 BRPF1P55201 1214 aaPredicted RBP15.18■□□□□ 0.02
TMEM56-201ENST00000370203 RNF20Q5VTR2 975 aa15.18■□□□□ 0.02
TMEM56-201ENST00000370203 RNF214Q8ND24 703 aa15.18■□□□□ 0.02
TMEM56-201ENST00000370203 TSR2Q969E8 191 aaKnown RBP15.18■□□□□ 0.02
TMEM56-201ENST00000370203 CDCA7LQ96GN5 454 aa15.18■□□□□ 0.02
TMEM56-201ENST00000370203 RAD54L2Q9Y4B4 1467 aa15.18■□□□□ 0.02
TMEM56-201ENST00000370203 KIF6Q6ZMV9 814 aa15.18■□□□□ 0.02
TMEM56-201ENST00000370203 CNNM1Q9NRU3 951 aa15.17■□□□□ 0.02
TMEM56-201ENST00000370203 EPS15P42566 896 aa15.17■□□□□ 0.02
TMEM56-201ENST00000370203 SURF6O75683 361 aaKnown RBP15.17■□□□□ 0.02
TMEM56-201ENST00000370203 CFAP70Q5T0N1 1121 aa15.17■□□□□ 0.02
TMEM56-201ENST00000370203 SASS6Q6UVJ0 657 aa15.17■□□□□ 0.02
TMEM56-201ENST00000370203 MPNDQ8N594 471 aa15.16■□□□□ 0.02
TMEM56-201ENST00000370203 PRAM1Q96QH2 718 aa15.16■□□□□ 0.02
TMEM56-201ENST00000370203 FANCD2Q9BXW9 1451 aa15.16■□□□□ 0.02
TMEM56-201ENST00000370203 TOM1L2Q6ZVM7 507 aa15.16■□□□□ 0.02
TMEM56-201ENST00000370203 FMNL2Q96PY5 1086 aa15.16■□□□□ 0.02
TMEM56-201ENST00000370203 ADAMTS8Q9UP79 889 aa15.16■□□□□ 0.02
TMEM56-201ENST00000370203 ODF2Q5BJF6 829 aa15.16■□□□□ 0.02
TMEM56-201ENST00000370203 INTS3Q68E01 1043 aaKnown RBP15.16■□□□□ 0.02
TMEM56-201ENST00000370203 IPO7O95373 1038 aaKnown RBP15.15■□□□□ 0.02
TMEM56-201ENST00000370203 TTC39AQ5SRH9 613 aa15.15■□□□□ 0.02
TMEM56-201ENST00000370203 GNAI1P63096 354 aa15.15■□□□□ 0.02
TMEM56-201ENST00000370203 SAFBQ15424 915 aaKnown RBP eCLIP15.15■□□□□ 0.02
TMEM56-201ENST00000370203 DHX37Q8IY37 1157 aaKnown RBP15.14■□□□□ 0.02
TMEM56-201ENST00000370203 ANKRD20A12PQ8NF67 263 aa15.14■□□□□ 0.02
TMEM56-201ENST00000370203 PRKAR2BP31323 418 aa15.14■□□□□ 0.01
TMEM56-201ENST00000370203 ERC2O15083 957 aa15.14■□□□□ 0.01
TMEM56-201ENST00000370203 ZNF771Q7L3S4 317 aaPredicted RBP15.14■□□□□ 0.01
TMEM56-201ENST00000370203 IFT57Q9NWB7 429 aa15.14■□□□□ 0.01
TMEM56-201ENST00000370203 GSE1Q14687 1217 aa15.14■□□□□ 0.01
TMEM56-201ENST00000370203 CCDC70Q6NSX1 233 aa15.14■□□□□ 0.01
TMEM56-201ENST00000370203 FAM13BQ9NYF5 915 aa15.14■□□□□ 0.01
TMEM56-201ENST00000370203 HSP90AB2PQ58FF8 381 aa15.13■□□□□ 0.01
TMEM56-201ENST00000370203 R3HCC1Q9Y3T6 440 aaKnown RBP15.13■□□□□ 0.01
TMEM56-201ENST00000370203 CHMP4BP1P59074 171 aa15.13■□□□□ 0.01
TMEM56-201ENST00000370203 PAF1Q8N7H5 531 aa15.13■□□□□ 0.01
TMEM56-201ENST00000370203 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
TMEM56-201ENST00000370203 ZHX3Q9H4I2 956 aa15.12■□□□□ 0.01
TMEM56-201ENST00000370203 AQRO60306 1485 aaKnown RBP eCLIP15.12■□□□□ 0.014e-6■□□□□ 10.8
TMEM56-201ENST00000370203 SF3B2Q13435 895 aaKnown RBP15.12■□□□□ 0.01
TMEM56-201ENST00000370203 CABP4P57796 275 aa15.12■□□□□ 0.01
TMEM56-201ENST00000370203 SLC26A8Q96RN1 970 aa15.12■□□□□ 0.01
TMEM56-201ENST00000370203 C22orf23Q9BZE7 217 aa15.12■□□□□ 0.01
TMEM56-201ENST00000370203 RRS1Q15050 365 aaKnown RBP15.12■□□□□ 0.01
TMEM56-201ENST00000370203 EXOSC9Q06265 439 aaKnown RBP15.11■□□□□ 0.01
TMEM56-201ENST00000370203 KIF7Q2M1P5 1343 aa15.11■□□□□ 0.01
TMEM56-201ENST00000370203 HSP90AA2PQ14568 343 aaPredicted RBP15.11■□□□□ 0.01
TMEM56-201ENST00000370203 MIS18AQ9NYP9 233 aa15.11■□□□□ 0.01
TMEM56-201ENST00000370203 NOB1Q9ULX3 412 aaKnown RBP15.11■□□□□ 0.01
TMEM56-201ENST00000370203 CCDC73Q6ZRK6 1079 aa15.1■□□□□ 0.01
TMEM56-201ENST00000370203 HOOK1Q9UJC3 728 aaKnown RBP15.1■□□□□ 0.01
TMEM56-201ENST00000370203 ZNF219Q9P2Y4 722 aaPredicted RBP15.1■□□□□ 0.01
TMEM56-201ENST00000370203 ZBED9Q6R2W3 1325 aa15.09■□□□□ 0.01
TMEM56-201ENST00000370203 CNTROBQ8N137 903 aa15.09■□□□□ 0.01
TMEM56-201ENST00000370203 SULT6B1Q6IMI4 303 aa15.09■□□□□ 0.01
TMEM56-201ENST00000370203 GPRASP1Q5JY77 1395 aa15.09■□□□□ 0.01
TMEM56-201ENST00000370203 NUP133Q8WUM0 1156 aa15.09■□□□□ 0.01
TMEM56-201ENST00000370203 TBC1D2BQ9UPU7 963 aa15.09■□□□□ 0.01
TMEM56-201ENST00000370203 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
TMEM56-201ENST00000370203 SLC4A2P04920 1241 aa15.09■□□□□ 0.01
TMEM56-201ENST00000370203 OFD1O75665 1012 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms