RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 MYO5CQ9NQX4 1742 aa20.31■□□□□ 0.84
CHD1L-203ENST00000369259 PLB1Q6P1J6 1458 aa20.31■□□□□ 0.84
CHD1L-203ENST00000369259 RBM25P49756 843 aaKnown RBP20.29■□□□□ 0.84
CHD1L-203ENST00000369259 ARHGEF5Q12774 1597 aa20.28■□□□□ 0.84
CHD1L-203ENST00000369259 HSP90AB1P08238 724 aaKnown RBP20.28■□□□□ 0.84
CHD1L-203ENST00000369259 MVPQ14764 893 aaKnown RBP20.28■□□□□ 0.84
CHD1L-203ENST00000369259 FAM13BQ9NYF5 915 aa20.27■□□□□ 0.84
CHD1L-203ENST00000369259 PLEKHD1A6NEE1 506 aa20.27■□□□□ 0.83
CHD1L-203ENST00000369259 BCL2L13Q9BXK5 485 aa20.27■□□□□ 0.83
CHD1L-203ENST00000369259 IBTKQ9P2D0 1353 aaPredicted RBP20.26■□□□□ 0.83
CHD1L-203ENST00000369259 HS1BP3Q53T59 392 aa20.26■□□□□ 0.83
CHD1L-203ENST00000369259 R3HCC1Q9Y3T6 440 aaKnown RBP20.26■□□□□ 0.83
CHD1L-203ENST00000369259 PLEKHG5O94827 1062 aa20.25■□□□□ 0.83
CHD1L-203ENST00000369259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.23■□□□□ 0.831e-8■■□□□ 13.5
CHD1L-203ENST00000369259 HDAC1Q13547 482 aaPredicted RBP20.23■□□□□ 0.83
CHD1L-203ENST00000369259 WDR63Q8IWG1 891 aa20.23■□□□□ 0.83
CHD1L-203ENST00000369259 IQGAP1P46940 1657 aa20.23■□□□□ 0.83
CHD1L-203ENST00000369259 GOLGA6L22H0YM25 854 aa20.22■□□□□ 0.83
CHD1L-203ENST00000369259 NEUROD2Q15784 382 aa20.22■□□□□ 0.83
CHD1L-203ENST00000369259 SMAP1Q8IYB5 467 aaPredicted RBP20.22■□□□□ 0.83
CHD1L-203ENST00000369259 POLR3AO14802 1390 aaPredicted RBP20.22■□□□□ 0.83
CHD1L-203ENST00000369259 ATP10AO60312 1499 aa20.22■□□□□ 0.83
CHD1L-203ENST00000369259 KLHL40Q2TBA0 621 aa20.22■□□□□ 0.83
CHD1L-203ENST00000369259 MTERF4Q7Z6M4 381 aaKnown RBP20.22■□□□□ 0.83
CHD1L-203ENST00000369259 MYOM1P52179 1685 aa20.22■□□□□ 0.83
CHD1L-203ENST00000369259 GRIN2AQ12879 1464 aa20.21■□□□□ 0.83
CHD1L-203ENST00000369259 UNC13BO14795 1591 aa20.21■□□□□ 0.83
CHD1L-203ENST00000369259 ZNF500O60304 480 aaPredicted RBP20.21■□□□□ 0.83
CHD1L-203ENST00000369259 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
CHD1L-203ENST00000369259 MAGI1Q96QZ7 1491 aaPredicted RBP20.21■□□□□ 0.83
CHD1L-203ENST00000369259 SCAF11Q99590 1463 aaKnown RBP20.21■□□□□ 0.83
CHD1L-203ENST00000369259 NOL7Q9UMY1 257 aaKnown RBP20.21■□□□□ 0.83
CHD1L-203ENST00000369259 DZIP1LQ8IYY4 767 aaKnown RBP20.2■□□□□ 0.82
CHD1L-203ENST00000369259 RUNDC1Q96C34 613 aa20.2■□□□□ 0.82
CHD1L-203ENST00000369259 RRP7AQ9Y3A4 280 aaKnown RBP20.2■□□□□ 0.82
CHD1L-203ENST00000369259 ZKSCAN2Q63HK3 967 aa20.2■□□□□ 0.82
CHD1L-203ENST00000369259 CLEC17AQ6ZS10 378 aa20.2■□□□□ 0.82
CHD1L-203ENST00000369259 FTSJ3Q8IY81 847 aaKnown RBP20.2■□□□□ 0.82
CHD1L-203ENST00000369259 UQCRHLA0A096LP55 91 aa20.19■□□□□ 0.82
CHD1L-203ENST00000369259 UQCRHP07919 91 aa20.19■□□□□ 0.82
CHD1L-203ENST00000369259 DDX49Q9Y6V7 483 aaKnown RBP20.19■□□□□ 0.82
CHD1L-203ENST00000369259 RSPH4AQ5TD94 716 aa20.19■□□□□ 0.82
CHD1L-203ENST00000369259 TCP11L2Q8N4U5 519 aa20.18■□□□□ 0.82
CHD1L-203ENST00000369259 KANK1Q14678 1352 aa20.17■□□□□ 0.82
CHD1L-203ENST00000369259 ZNF445P59923 1031 aa20.17■□□□□ 0.82
CHD1L-203ENST00000369259 DYNC1I1O14576 645 aa20.16■□□□□ 0.82
CHD1L-203ENST00000369259 SSFA2P28290 1259 aa20.16■□□□□ 0.82
CHD1L-203ENST00000369259 FOXD4L1Q9NU39 408 aa20.16■□□□□ 0.82
CHD1L-203ENST00000369259 MADDQ8WXG6 1647 aa20.16■□□□□ 0.82
CHD1L-203ENST00000369259 K7ELQ4 463 aaPredicted RBP20.15■□□□□ 0.82
CHD1L-203ENST00000369259 KIF2CQ99661 725 aa20.15■□□□□ 0.82
CHD1L-203ENST00000369259 SHROOM2Q13796 1616 aa20.15■□□□□ 0.82
CHD1L-203ENST00000369259 IQGAP3Q86VI3 1631 aa20.15■□□□□ 0.82
CHD1L-203ENST00000369259 CARD14Q9BXL6 1004 aa20.15■□□□□ 0.82
CHD1L-203ENST00000369259 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.15■□□□□ 0.82
CHD1L-203ENST00000369259 IQSEC2Q5JU85 1478 aa20.14■□□□□ 0.82
CHD1L-203ENST00000369259 CSPP1Q1MSJ5 1256 aa20.14■□□□□ 0.82
CHD1L-203ENST00000369259 CCDC27Q2M243 656 aa20.14■□□□□ 0.82
CHD1L-203ENST00000369259 PDLIM2Q96JY6 352 aa20.14■□□□□ 0.82
CHD1L-203ENST00000369259 BAG4O95429 457 aaKnown RBP20.14■□□□□ 0.81
CHD1L-203ENST00000369259 XPCQ01831 940 aaPredicted RBP20.14■□□□□ 0.81
CHD1L-203ENST00000369259 DDX19BQ9UMR2 479 aa20.13■□□□□ 0.81
CHD1L-203ENST00000369259 CD2BP2O95400 341 aaKnown RBP20.13■□□□□ 0.81
CHD1L-203ENST00000369259 ARHGAP31Q2M1Z3 1444 aa20.12■□□□□ 0.81
CHD1L-203ENST00000369259 KDM5AP29375 1690 aaKnown RBP20.12■□□□□ 0.81
CHD1L-203ENST00000369259 ZKSCAN5Q9Y2L8 839 aa20.11■□□□□ 0.81
CHD1L-203ENST00000369259 MCM5P33992 734 aa20.1■□□□□ 0.81
CHD1L-203ENST00000369259 ATP10BO94823 1461 aa20.1■□□□□ 0.81
CHD1L-203ENST00000369259 ABCA8O94911 1581 aa20.1■□□□□ 0.81
CHD1L-203ENST00000369259 SAMD9LQ8IVG5 1584 aa20.1■□□□□ 0.81
CHD1L-203ENST00000369259 CT47B1P0C2W7 299 aaPredicted RBP20.09■□□□□ 0.81
CHD1L-203ENST00000369259 NUCB1Q02818 461 aa20.09■□□□□ 0.81
CHD1L-203ENST00000369259 ITPRIPQ8IWB1 547 aa20.09■□□□□ 0.81
CHD1L-203ENST00000369259 GAS2L2Q8NHY3 880 aa20.09■□□□□ 0.81
CHD1L-203ENST00000369259 SLC24A1O60721 1099 aa20.09■□□□□ 0.81
CHD1L-203ENST00000369259 ZSCAN23Q3MJ62 389 aa20.09■□□□□ 0.81
CHD1L-203ENST00000369259 STAC3Q96MF2 364 aa20.09■□□□□ 0.81
CHD1L-203ENST00000369259 RBSNQ9H1K0 784 aa20.09■□□□□ 0.81
CHD1L-203ENST00000369259 A0A0U1RQG5 324 aaPredicted RBP20.08■□□□□ 0.81
CHD1L-203ENST00000369259 SASS6Q6UVJ0 657 aa20.08■□□□□ 0.81
CHD1L-203ENST00000369259 TRIM27P14373 513 aa20.08■□□□□ 0.8
CHD1L-203ENST00000369259 BMP2KLQ5H9B9 411 aa20.08■□□□□ 0.8
CHD1L-203ENST00000369259 SHPRHQ149N8 1683 aa20.08■□□□□ 0.8
CHD1L-203ENST00000369259 CAVIN1Q6NZI2 390 aaKnown RBP20.07■□□□□ 0.8
CHD1L-203ENST00000369259 NCBP3Q53F19 620 aaKnown RBP20.07■□□□□ 0.8
CHD1L-203ENST00000369259 SMC4Q9NTJ3 1288 aa20.07■□□□□ 0.8
CHD1L-203ENST00000369259 CEP152O94986 1710 aa20.07■□□□□ 0.8
CHD1L-203ENST00000369259 TTC37Q6PGP7 1564 aa20.06■□□□□ 0.8
CHD1L-203ENST00000369259 CARMIL2Q6F5E8 1435 aa20.06■□□□□ 0.8
CHD1L-203ENST00000369259 NCLP19338 710 aaKnown RBP20.06■□□□□ 0.8
CHD1L-203ENST00000369259 UTP14CQ5TAP6 766 aaKnown RBP20.06■□□□□ 0.8
CHD1L-203ENST00000369259 MCTP1Q6DN14 999 aa20.06■□□□□ 0.8
CHD1L-203ENST00000369259 ARID3AQ99856 593 aa20.06■□□□□ 0.8
CHD1L-203ENST00000369259 LNPKQ9C0E8 428 aa20.06■□□□□ 0.8
CHD1L-203ENST00000369259 DUOX2Q9NRD8 1548 aa20.05■□□□□ 0.8
CHD1L-203ENST00000369259 MAST1Q9Y2H9 1570 aa20.05■□□□□ 0.8
CHD1L-203ENST00000369259 ATF7IPQ6VMQ6 1270 aa20.05■□□□□ 0.8
CHD1L-203ENST00000369259 MORC1Q86VD1 984 aa20.05■□□□□ 0.8
CHD1L-203ENST00000369259 CHD1LQ86WJ1 897 aa20.05■□□□□ 0.8
CHD1L-203ENST00000369259 RBM42Q9BTD8 480 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms