RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 STAC3Q96MF2 364 aa12.14□□□□□ -0.47
SIM1-202ENST00000369208 HSP90AB3PQ58FF7 597 aa12.14□□□□□ -0.47
SIM1-202ENST00000369208 KLHL34Q8N239 644 aa12.14□□□□□ -0.47
SIM1-202ENST00000369208 SF3A1Q15459 793 aaKnown RBP12.14□□□□□ -0.47
SIM1-202ENST00000369208 SYTL4Q96C24 671 aaPredicted RBP12.14□□□□□ -0.47
SIM1-202ENST00000369208 FAM69CQ0P6D2 419 aa12.14□□□□□ -0.47
SIM1-202ENST00000369208 ROCK1Q13464 1354 aa12.13□□□□□ -0.47
SIM1-202ENST00000369208 HSPA5P11021 654 aaKnown RBP12.13□□□□□ -0.47
SIM1-202ENST00000369208 AAMPQ13685 434 aa12.13□□□□□ -0.47
SIM1-202ENST00000369208 FAM193AP78312 1265 aa12.13□□□□□ -0.47
SIM1-202ENST00000369208 TTLL5Q6EMB2 1281 aa12.13□□□□□ -0.47
SIM1-202ENST00000369208 MIA2Q96PC5 1412 aa12.13□□□□□ -0.47
SIM1-202ENST00000369208 TMCO5BA8MYB1 307 aa12.13□□□□□ -0.47
SIM1-202ENST00000369208 TPD52L1Q16890 204 aaPredicted RBP12.12□□□□□ -0.47
SIM1-202ENST00000369208 RUFY2Q8WXA3 655 aa12.12□□□□□ -0.47
SIM1-202ENST00000369208 HMGB1P1B2RPK0 211 aaPredicted RBP12.12□□□□□ -0.47
SIM1-202ENST00000369208 KIAA1328Q86T90 577 aa12.12□□□□□ -0.47
SIM1-202ENST00000369208 CENPJQ9HC77 1338 aaPredicted RBP12.12□□□□□ -0.47
SIM1-202ENST00000369208 RAPGEF4Q8WZA2 1011 aa12.12□□□□□ -0.47
SIM1-202ENST00000369208 ZNF526Q8TF50 670 aaPredicted RBP12.11□□□□□ -0.47
SIM1-202ENST00000369208 C9orf78Q9NZ63 289 aaPredicted RBP12.11□□□□□ -0.47
SIM1-202ENST00000369208 TRIM29Q14134 588 aa12.11□□□□□ -0.47
SIM1-202ENST00000369208 SPRYD3Q8NCJ5 442 aa12.11□□□□□ -0.47
SIM1-202ENST00000369208 NLRP13Q86W25 1043 aa12.11□□□□□ -0.47
SIM1-202ENST00000369208 POLR3GO15318 223 aaPredicted RBP12.11□□□□□ -0.47
SIM1-202ENST00000369208 GRPEL1Q9HAV7 217 aa12.11□□□□□ -0.47
SIM1-202ENST00000369208 NUTM2FA1L443 756 aa12.11□□□□□ -0.47
SIM1-202ENST00000369208 H3BQV1 296 aa12.1□□□□□ -0.47
SIM1-202ENST00000369208 MBD3O95983 291 aa12.1□□□□□ -0.47
SIM1-202ENST00000369208 IFFO2Q5TF58 517 aa12.1□□□□□ -0.47
SIM1-202ENST00000369208 PRIMPOLQ96LW4 560 aa12.1□□□□□ -0.47
SIM1-202ENST00000369208 CREBRFQ8IUR6 639 aa12.1□□□□□ -0.47
SIM1-202ENST00000369208 FBXW7Q969H0 707 aa12.1□□□□□ -0.47
SIM1-202ENST00000369208 KIF2AO00139 706 aaPredicted RBP12.1□□□□□ -0.47
SIM1-202ENST00000369208 BCL11BQ9C0K0 894 aaPredicted RBP12.1□□□□□ -0.47
SIM1-202ENST00000369208 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
SIM1-202ENST00000369208 SENP3-EIF4A1A0A087X0R7 540 aa12.1□□□□□ -0.47
SIM1-202ENST00000369208 TXLNBQ8N3L3 684 aa12.1□□□□□ -0.47
SIM1-202ENST00000369208 TRAK1Q9UPV9 953 aa12.1□□□□□ -0.47
SIM1-202ENST00000369208 GPRASP1Q5JY77 1395 aa12.1□□□□□ -0.47
SIM1-202ENST00000369208 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
SIM1-202ENST00000369208 MRVI1Q9Y6F6 885 aa12.1□□□□□ -0.47
SIM1-202ENST00000369208 TRAK2O60296 914 aa12.09□□□□□ -0.47
SIM1-202ENST00000369208 CPSF2Q9P2I0 782 aaKnown RBP12.09□□□□□ -0.47
SIM1-202ENST00000369208 ERICH2A1L162 156 aa12.09□□□□□ -0.47
SIM1-202ENST00000369208 TRDNQ13061 729 aa12.09□□□□□ -0.47
SIM1-202ENST00000369208 HOOK1Q9UJC3 728 aaKnown RBP12.09□□□□□ -0.47
SIM1-202ENST00000369208 GPATCH11Q8N954 259 aa12.09□□□□□ -0.47
SIM1-202ENST00000369208 FAM184AQ8NB25 1140 aa12.09□□□□□ -0.47
SIM1-202ENST00000369208 RAD21O60216 631 aa12.09□□□□□ -0.47
SIM1-202ENST00000369208 TERF1P54274 439 aa12.09□□□□□ -0.47
SIM1-202ENST00000369208 NUTM2DQ5VT03 806 aaPredicted RBP12.09□□□□□ -0.47
SIM1-202ENST00000369208 CCAR1Q8IX12 1150 aaKnown RBP12.09□□□□□ -0.47
SIM1-202ENST00000369208 KIF15Q9NS87 1388 aa12.09□□□□□ -0.47
SIM1-202ENST00000369208 WWC2Q6AWC2 1192 aa12.08□□□□□ -0.47
SIM1-202ENST00000369208 ANKRD20A12PQ8NF67 263 aa12.08□□□□□ -0.47
SIM1-202ENST00000369208 IVLP07476 585 aa12.08□□□□□ -0.48
SIM1-202ENST00000369208 SARNPP82979 210 aaKnown RBP12.08□□□□□ -0.48
SIM1-202ENST00000369208 CCDC94Q9BW85 323 aaPredicted RBP12.08□□□□□ -0.48
SIM1-202ENST00000369208 ZHX1Q9UKY1 873 aaPredicted RBP12.08□□□□□ -0.48
SIM1-202ENST00000369208 DHX16O60231 1041 aaKnown RBP12.08□□□□□ -0.48
SIM1-202ENST00000369208 MPHOSPH10O00566 681 aaKnown RBP12.07□□□□□ -0.48
SIM1-202ENST00000369208 IFT57Q9NWB7 429 aa12.07□□□□□ -0.48
SIM1-202ENST00000369208 PRDM2Q13029 1718 aa12.07□□□□□ -0.48
SIM1-202ENST00000369208 DHX57Q6P158 1386 aaKnown RBP12.07□□□□□ -0.48
SIM1-202ENST00000369208 RABEP1Q15276 862 aa12.06□□□□□ -0.48
SIM1-202ENST00000369208 ZNF592Q92610 1267 aa12.06□□□□□ -0.48
SIM1-202ENST00000369208 HSP90AB4PQ58FF6 505 aa12.06□□□□□ -0.48
SIM1-202ENST00000369208 POGZQ7Z3K3 1410 aa12.06□□□□□ -0.48
SIM1-202ENST00000369208 SMG6Q86US8 1419 aaKnown RBP12.06□□□□□ -0.48
SIM1-202ENST00000369208 MYO6Q9UM54 1294 aa12.06□□□□□ -0.48
SIM1-202ENST00000369208 ERLIN1O75477 346 aa12.06□□□□□ -0.48
SIM1-202ENST00000369208 SLC26A8Q96RN1 970 aa12.06□□□□□ -0.48
SIM1-202ENST00000369208 SUDS3Q9H7L9 328 aaPredicted RBP12.06□□□□□ -0.48
SIM1-202ENST00000369208 HOMER1Q86YM7 354 aa12.05□□□□□ -0.48
SIM1-202ENST00000369208 ZKSCAN1P17029 563 aaPredicted RBP12.05□□□□□ -0.48
SIM1-202ENST00000369208 CCDC112Q8NEF3 446 aa12.05□□□□□ -0.48
SIM1-202ENST00000369208 CT47A1Q5JQC4 288 aaPredicted RBP12.04□□□□□ -0.48
SIM1-202ENST00000369208 SWAP70Q9UH65 585 aa12.04□□□□□ -0.48
SIM1-202ENST00000369208 IPO7O95373 1038 aaKnown RBP12.04□□□□□ -0.48
SIM1-202ENST00000369208 LUZP1Q86V48 1076 aa12.04□□□□□ -0.48
SIM1-202ENST00000369208 FHOD3Q2V2M9 1422 aa12.04□□□□□ -0.48
SIM1-202ENST00000369208 BECN2A8MW95 431 aa12.03□□□□□ -0.48
SIM1-202ENST00000369208 G3BP1Q13283 466 aaKnown RBP eCLIP12.03□□□□□ -0.48
SIM1-202ENST00000369208 IFIT2P09913 472 aaKnown RBP12.03□□□□□ -0.48
SIM1-202ENST00000369208 MICALCLQ6ZW33 695 aa12.03□□□□□ -0.48
SIM1-202ENST00000369208 NINLQ9Y2I6 1382 aa12.03□□□□□ -0.48
SIM1-202ENST00000369208 MROH2BQ7Z745 1585 aa12.03□□□□□ -0.48
SIM1-202ENST00000369208 CPLX1O14810 134 aa12.03□□□□□ -0.48
SIM1-202ENST00000369208 RAB3GAP2Q9H2M9 1393 aa12.02□□□□□ -0.48
SIM1-202ENST00000369208 MYCBPQ99417 103 aaPredicted RBP12.02□□□□□ -0.48
SIM1-202ENST00000369208 MFAP1P55081 439 aaKnown RBP12.02□□□□□ -0.49
SIM1-202ENST00000369208 GOLGA6L10A0A0M3HER8 536 aa12.02□□□□□ -0.49
SIM1-202ENST00000369208 FEZ1Q99689 392 aa12.02□□□□□ -0.49
SIM1-202ENST00000369208 NF2P35240 595 aa12.01□□□□□ -0.49
SIM1-202ENST00000369208 HS1BP3Q53T59 392 aa12.01□□□□□ -0.49
SIM1-202ENST00000369208 BRMS1Q9HCU9 246 aa12.01□□□□□ -0.49
SIM1-202ENST00000369208 CCAR2Q8N163 923 aaKnown RBP12.01□□□□□ -0.49
SIM1-202ENST00000369208 NAT10Q9H0A0 1025 aaKnown RBP12.01□□□□□ -0.49
SIM1-202ENST00000369208 CUX1P39880 1505 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms