RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 QRICH2Q9H0J4 1663 aa19.65■□□□□ 0.74
TPM3-211ENST00000368531 C19orf44Q9H6X5 657 aa19.64■□□□□ 0.73
TPM3-211ENST00000368531 CENPJQ9HC77 1338 aaPredicted RBP19.64■□□□□ 0.73
TPM3-211ENST00000368531 ADGRL3Q9HAR2 1447 aa19.63■□□□□ 0.73
TPM3-211ENST00000368531 NCOA3Q9Y6Q9 1424 aa19.63■□□□□ 0.73
TPM3-211ENST00000368531 EIF3AQ14152 1382 aaKnown RBP19.63■□□□□ 0.73
TPM3-211ENST00000368531 ZEB1P37275 1124 aaPredicted RBP19.63■□□□□ 0.73
TPM3-211ENST00000368531 ATF3P18847 181 aa19.62■□□□□ 0.73
TPM3-211ENST00000368531 USP47Q96K76 1375 aa19.61■□□□□ 0.73
TPM3-211ENST00000368531 NUTM2FA1L443 756 aa19.6■□□□□ 0.73
TPM3-211ENST00000368531 UBAP1LF5GYI3 381 aa19.6■□□□□ 0.73
TPM3-211ENST00000368531 IQSEC2Q5JU85 1478 aa19.6■□□□□ 0.73
TPM3-211ENST00000368531 ST20-MTHFSA0A0A6YYL1 179 aa19.59■□□□□ 0.73
TPM3-211ENST00000368531 CADPS2Q86UW7 1296 aa19.57■□□□□ 0.72
TPM3-211ENST00000368531 SCAF1Q9H7N4 1312 aaKnown RBP19.56■□□□□ 0.72
TPM3-211ENST00000368531 TOM1O60784 492 aa19.56■□□□□ 0.72
TPM3-211ENST00000368531 EIF4G2P78344 907 aaKnown RBP eCLIP19.56■□□□□ 0.72
TPM3-211ENST00000368531 PIP4K2BP78356 416 aa19.56■□□□□ 0.72
TPM3-211ENST00000368531 RGPD8O14715 1765 aaPredicted RBP19.55■□□□□ 0.72
TPM3-211ENST00000368531 HSPA5P11021 654 aaKnown RBP19.55■□□□□ 0.72
TPM3-211ENST00000368531 FMN2Q9NZ56 1722 aa19.54■□□□□ 0.72
TPM3-211ENST00000368531 CDC42BPGQ6DT37 1551 aa19.54■□□□□ 0.72
TPM3-211ENST00000368531 WASLO00401 505 aaPredicted RBP19.54■□□□□ 0.72
TPM3-211ENST00000368531 ADGRB2O60241 1585 aa19.53■□□□□ 0.72
TPM3-211ENST00000368531 DCCP43146 1447 aa19.53■□□□□ 0.72
TPM3-211ENST00000368531 CDK19Q9BWU1 502 aa19.53■□□□□ 0.72
TPM3-211ENST00000368531 SLAIN2Q9P270 581 aa19.53■□□□□ 0.72
TPM3-211ENST00000368531 SRPK2P78362 688 aaKnown RBP19.51■□□□□ 0.71
TPM3-211ENST00000368531 MST1RQ04912 1400 aa19.51■□□□□ 0.71
TPM3-211ENST00000368531 EVC2Q86UK5 1308 aa19.51■□□□□ 0.71
TPM3-211ENST00000368531 TESK2Q96S53 571 aa19.5■□□□□ 0.71
TPM3-211ENST00000368531 CABP2Q9NPB3 220 aa19.5■□□□□ 0.71
TPM3-211ENST00000368531 TULP4Q9NRJ4 1543 aa19.5■□□□□ 0.71
TPM3-211ENST00000368531 C1orf167Q5SNV9 1468 aa19.48■□□□□ 0.71
TPM3-211ENST00000368531 USP32Q8NFA0 1604 aa19.47■□□□□ 0.71
TPM3-211ENST00000368531 ESCO1Q5FWF5 840 aa19.47■□□□□ 0.71
TPM3-211ENST00000368531 ORAI2Q96SN7 254 aa19.47■□□□□ 0.71
TPM3-211ENST00000368531 PRR36Q9H6K5 1346 aa19.47■□□□□ 0.71
TPM3-211ENST00000368531 ROBO1Q9Y6N7 1651 aa19.46■□□□□ 0.71
TPM3-211ENST00000368531 SBNO2Q9Y2G9 1366 aa19.46■□□□□ 0.71
TPM3-211ENST00000368531 NUDT16Q96DE0 195 aaKnown RBP19.46■□□□□ 0.71
TPM3-211ENST00000368531 TMF1P82094 1093 aa19.45■□□□□ 0.7
TPM3-211ENST00000368531 POLR3GLQ9BT43 218 aa19.44■□□□□ 0.7
TPM3-211ENST00000368531 DISP3Q9P2K9 1392 aa19.44■□□□□ 0.7
TPM3-211ENST00000368531 BRINP3Q76B58 766 aa19.43■□□□□ 0.7
TPM3-211ENST00000368531 PMFBP1Q8TBY8 1022 aa19.43■□□□□ 0.7
TPM3-211ENST00000368531 FBXO41Q8TF61 875 aa19.43■□□□□ 0.7
TPM3-211ENST00000368531 ITSN1Q15811 1721 aa19.42■□□□□ 0.7
TPM3-211ENST00000368531 ANKARQ7Z5J8 1434 aa19.42■□□□□ 0.7
TPM3-211ENST00000368531 ATP7BP35670 1465 aa19.41■□□□□ 0.7
TPM3-211ENST00000368531 SLC24A1O60721 1099 aa19.41■□□□□ 0.7
TPM3-211ENST00000368531 DDX17Q92841 729 aaKnown RBP19.41■□□□□ 0.7
TPM3-211ENST00000368531 PHF8Q9UPP1 1060 aa19.41■□□□□ 0.7
TPM3-211ENST00000368531 CCDC61Q9Y6R9 512 aa19.4■□□□□ 0.7
TPM3-211ENST00000368531 FOXO3O43524 673 aa19.38■□□□□ 0.69
TPM3-211ENST00000368531 PPIP5K1Q6PFW1 1433 aa19.38■□□□□ 0.69
TPM3-211ENST00000368531 TOPAZ1Q8N9V7 1692 aa19.38■□□□□ 0.69
TPM3-211ENST00000368531 TMC1Q8TDI8 760 aa19.38■□□□□ 0.69
TPM3-211ENST00000368531 ATAD2Q6PL18 1390 aa19.37■□□□□ 0.69
TPM3-211ENST00000368531 C11orf95C9JLR9 678 aaPredicted RBP19.37■□□□□ 0.69
TPM3-211ENST00000368531 XPCQ01831 940 aaPredicted RBP19.37■□□□□ 0.69
TPM3-211ENST00000368531 NGDNQ8NEJ9 315 aaKnown RBP19.37■□□□□ 0.69
TPM3-211ENST00000368531 CABP1Q9NZU7 370 aa19.37■□□□□ 0.69
TPM3-211ENST00000368531 KIF1AQ12756 1690 aa19.36■□□□□ 0.69
TPM3-211ENST00000368531 CDCA8Q53HL2 280 aa19.36■□□□□ 0.69
TPM3-211ENST00000368531 PHLPP1O60346 1717 aa19.36■□□□□ 0.69
TPM3-211ENST00000368531 NHSL1Q5SYE7 1610 aa19.34■□□□□ 0.69
TPM3-211ENST00000368531 SLC12A5Q9H2X9 1139 aa19.34■□□□□ 0.69
TPM3-211ENST00000368531 ACEP12821 1306 aa19.33■□□□□ 0.69
TPM3-211ENST00000368531 HSPA1LP34931 641 aa19.33■□□□□ 0.68
TPM3-211ENST00000368531 PSME1Q06323 249 aa19.33■□□□□ 0.68
TPM3-211ENST00000368531 PUS7Q96PZ0 661 aaKnown RBP19.33■□□□□ 0.68
TPM3-211ENST00000368531 PLEKHG3A1L390 1219 aa19.32■□□□□ 0.68
TPM3-211ENST00000368531 NPHP3Q7Z494 1330 aa19.31■□□□□ 0.68
TPM3-211ENST00000368531 KRT28Q7Z3Y7 464 aa19.31■□□□□ 0.68
TPM3-211ENST00000368531 AHDC1Q5TGY3 1603 aaPredicted RBP19.3■□□□□ 0.68
TPM3-211ENST00000368531 KIF7Q2M1P5 1343 aa19.29■□□□□ 0.68
TPM3-211ENST00000368531 ILDR1Q86SU0 546 aaPredicted RBP19.29■□□□□ 0.68
TPM3-211ENST00000368531 AKAP12Q02952 1782 aa19.29■□□□□ 0.68
TPM3-211ENST00000368531 MYOM1P52179 1685 aa19.28■□□□□ 0.68
TPM3-211ENST00000368531 PAK3O75914 559 aaPredicted RBP19.27■□□□□ 0.68
TPM3-211ENST00000368531 POLR3AO14802 1390 aaPredicted RBP19.27■□□□□ 0.68
TPM3-211ENST00000368531 SOS2Q07890 1332 aaPredicted RBP19.26■□□□□ 0.67
TPM3-211ENST00000368531 COL16A1Q07092 1604 aaPredicted RBP19.26■□□□□ 0.67
TPM3-211ENST00000368531 LMOD2Q6P5Q4 547 aa19.26■□□□□ 0.67
TPM3-211ENST00000368531 HDGFL2Q7Z4V5 671 aaPredicted RBP19.26■□□□□ 0.67
TPM3-211ENST00000368531 PXDNQ92626 1479 aa19.26■□□□□ 0.67
TPM3-211ENST00000368531 WASHC2AQ641Q2 1341 aa19.25■□□□□ 0.67
TPM3-211ENST00000368531 CCDC7Q96M83 1385 aa19.25■□□□□ 0.67
TPM3-211ENST00000368531 PLEKHG5O94827 1062 aa19.25■□□□□ 0.67
TPM3-211ENST00000368531 TERF2IPQ9NYB0 399 aa19.25■□□□□ 0.67
TPM3-211ENST00000368531 KTN1Q86UP2 1357 aaKnown RBP19.24■□□□□ 0.67
TPM3-211ENST00000368531 MSH5O43196 834 aa19.24■□□□□ 0.67
TPM3-211ENST00000368531 CD163L1Q9NR16 1453 aa19.23■□□□□ 0.67
TPM3-211ENST00000368531 TRPM3Q9HCF6 1732 aaPredicted RBP19.23■□□□□ 0.67
TPM3-211ENST00000368531 NINLQ9Y2I6 1382 aa19.23■□□□□ 0.67
TPM3-211ENST00000368531 LRRC59Q96AG4 307 aaKnown RBP19.23■□□□□ 0.67
TPM3-211ENST00000368531 ZNF692Q9BU19 519 aaPredicted RBP19.23■□□□□ 0.67
TPM3-211ENST00000368531 CPSF1Q10570 1443 aaKnown RBP19.23■□□□□ 0.67
TPM3-211ENST00000368531 MON2Q7Z3U7 1717 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms