RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 MYO5BQ9ULV0 1848 aa16.26■□□□□ 0.19
LMNA-206ENST00000368300 PREX1Q8TCU6 1659 aa16.25■□□□□ 0.19
LMNA-206ENST00000368300 SPINK5Q9NQ38 1064 aaPredicted RBP16.25■□□□□ 0.19
LMNA-206ENST00000368300 ESF1Q9H501 851 aaKnown RBP16.24■□□□□ 0.19
LMNA-206ENST00000368300 INSRP06213 1382 aa16.24■□□□□ 0.19
LMNA-206ENST00000368300 MTHFSP49914 203 aa16.24■□□□□ 0.19
LMNA-206ENST00000368300 GOLGA2Q08379 1002 aa16.24■□□□□ 0.19
LMNA-206ENST00000368300 NEUROD2Q15784 382 aa16.24■□□□□ 0.19
LMNA-206ENST00000368300 ZC3H13Q5T200 1668 aaKnown RBP16.24■□□□□ 0.19
LMNA-206ENST00000368300 DUSP27Q5VZP5 1158 aa16.24■□□□□ 0.19
LMNA-206ENST00000368300 WAPLQ7Z5K2 1190 aa16.24■□□□□ 0.19
LMNA-206ENST00000368300 CGNL1Q0VF96 1302 aa16.23■□□□□ 0.19
LMNA-206ENST00000368300 TULP4Q9NRJ4 1543 aa16.23■□□□□ 0.19
LMNA-206ENST00000368300 TMEM131LA2VDJ0 1609 aa16.23■□□□□ 0.19
LMNA-206ENST00000368300 DMRT2Q9Y5R5 561 aa16.23■□□□□ 0.19
LMNA-206ENST00000368300 RRP7AQ9Y3A4 280 aaKnown RBP16.22■□□□□ 0.19
LMNA-206ENST00000368300 ZFYVE9O95405 1425 aa16.22■□□□□ 0.19
LMNA-206ENST00000368300 C20orf194Q5TEA3 1177 aa16.22■□□□□ 0.19
LMNA-206ENST00000368300 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
LMNA-206ENST00000368300 GGNBP2Q9H3C7 697 aa16.22■□□□□ 0.19
LMNA-206ENST00000368300 ZNF521Q96K83 1311 aa16.21■□□□□ 0.19
LMNA-206ENST00000368300 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.21■□□□□ 0.19
LMNA-206ENST00000368300 YTHDC2Q9H6S0 1430 aaKnown RBP16.21■□□□□ 0.19
LMNA-206ENST00000368300 CRBNQ96SW2 442 aa16.2■□□□□ 0.18
LMNA-206ENST00000368300 SLFN5Q08AF3 891 aa16.19■□□□□ 0.18
LMNA-206ENST00000368300 CDK19Q9BWU1 502 aa16.19■□□□□ 0.18
LMNA-206ENST00000368300 PPP6R1Q9UPN7 881 aa16.19■□□□□ 0.18
LMNA-206ENST00000368300 ARHGEF28Q8N1W1 1705 aaKnown RBP16.19■□□□□ 0.18
LMNA-206ENST00000368300 CLTCQ00610 1675 aaKnown RBP16.19■□□□□ 0.18
LMNA-206ENST00000368300 RTN4Q9NQC3 1192 aaKnown RBP16.18■□□□□ 0.18
LMNA-206ENST00000368300 ANKRD36BQ8N2N9 1353 aa16.18■□□□□ 0.18
LMNA-206ENST00000368300 A0A1W2PP64 1363 aa16.18■□□□□ 0.18
LMNA-206ENST00000368300 ZMYM3Q14202 1370 aa16.18■□□□□ 0.18
LMNA-206ENST00000368300 CABP1Q9NZU7 370 aa16.18■□□□□ 0.18
LMNA-206ENST00000368300 POLR3AO14802 1390 aaPredicted RBP16.17■□□□□ 0.18
LMNA-206ENST00000368300 PTPRMP28827 1452 aa16.17■□□□□ 0.18
LMNA-206ENST00000368300 A2ML1A8K2U0 1454 aa16.17■□□□□ 0.18
LMNA-206ENST00000368300 RIMS2Q9UQ26 1411 aa16.17■□□□□ 0.18
LMNA-206ENST00000368300 AGLP35573 1532 aa16.16■□□□□ 0.18
LMNA-206ENST00000368300 PUS7Q96PZ0 661 aaKnown RBP16.16■□□□□ 0.18
LMNA-206ENST00000368300 ALKQ9UM73 1620 aa16.15■□□□□ 0.18
LMNA-206ENST00000368300 FBLN1P23142 703 aa16.15■□□□□ 0.18
LMNA-206ENST00000368300 CEBPAP49715 358 aaPredicted RBP16.15■□□□□ 0.18
LMNA-206ENST00000368300 TXNDC2Q86VQ3 553 aa16.15■□□□□ 0.18
LMNA-206ENST00000368300 U2AF1L5P0DN76 240 aaPredicted RBP16.14■□□□□ 0.17
LMNA-206ENST00000368300 U2AF1Q01081 240 aaKnown RBP eCLIP16.14■□□□□ 0.17
LMNA-206ENST00000368300 SKAP1Q86WV1 359 aa16.14■□□□□ 0.17
LMNA-206ENST00000368300 TCP11L2Q8N4U5 519 aa16.14■□□□□ 0.17
LMNA-206ENST00000368300 FYB1O15117 783 aa16.14■□□□□ 0.17
LMNA-206ENST00000368300 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.14■□□□□ 0.17
LMNA-206ENST00000368300 WWC1Q8IX03 1113 aa16.13■□□□□ 0.17
LMNA-206ENST00000368300 CFAP53Q96M91 514 aa16.13■□□□□ 0.17
LMNA-206ENST00000368300 TERF2IPQ9NYB0 399 aa16.13■□□□□ 0.17
LMNA-206ENST00000368300 BCAR3O75815 825 aa16.13■□□□□ 0.17
LMNA-206ENST00000368300 KIF13AQ9H1H9 1805 aa16.12■□□□□ 0.17
LMNA-206ENST00000368300 U2SURPO15042 1029 aaKnown RBP16.12■□□□□ 0.17
LMNA-206ENST00000368300 DEKP35659 375 aaKnown RBP16.12■□□□□ 0.17
LMNA-206ENST00000368300 TRMT2AQ8IZ69 625 aaKnown RBP16.12■□□□□ 0.17
LMNA-206ENST00000368300 METP08581 1390 aa16.11■□□□□ 0.17
LMNA-206ENST00000368300 RUNDC1Q96C34 613 aa16.11■□□□□ 0.17
LMNA-206ENST00000368300 NCKAP5LQ9HCH0 1330 aa16.11■□□□□ 0.17
LMNA-206ENST00000368300 REREQ9P2R6 1566 aa16.11■□□□□ 0.17
LMNA-206ENST00000368300 MSH5O43196 834 aa16.1■□□□□ 0.17
LMNA-206ENST00000368300 ATAD2Q6PL18 1390 aa16.1■□□□□ 0.17
LMNA-206ENST00000368300 E9PSI1 815 aa16.1■□□□□ 0.17
LMNA-206ENST00000368300 HDGFL2Q7Z4V5 671 aaPredicted RBP16.1■□□□□ 0.17
LMNA-206ENST00000368300 SPATA31D1Q6ZQQ2 1576 aa16.09■□□□□ 0.17
LMNA-206ENST00000368300 PPM1GO15355 546 aaPredicted RBP16.09■□□□□ 0.17
LMNA-206ENST00000368300 ABCC11Q96J66 1382 aa16.09■□□□□ 0.17
LMNA-206ENST00000368300 ARHGEF40Q8TER5 1519 aa16.09■□□□□ 0.17
LMNA-206ENST00000368300 CD163L1Q9NR16 1453 aa16.07■□□□□ 0.16
LMNA-206ENST00000368300 TNRQ92752 1358 aa16.07■□□□□ 0.16
LMNA-206ENST00000368300 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.06■□□□□ 0.165e-9■□□□□ 8
LMNA-206ENST00000368300 NUTM2FA1L443 756 aa16.06■□□□□ 0.16
LMNA-206ENST00000368300 NSD2O96028 1365 aa16.05■□□□□ 0.16
LMNA-206ENST00000368300 NBR1Q14596 966 aa16.05■□□□□ 0.16
LMNA-206ENST00000368300 ZRANB1Q9UGI0 708 aa16.05■□□□□ 0.16
LMNA-206ENST00000368300 NKTRP30414 1462 aaKnown RBP16.04■□□□□ 0.16
LMNA-206ENST00000368300 NINLQ9Y2I6 1382 aa16.04■□□□□ 0.16
LMNA-206ENST00000368300 WASLO00401 505 aaPredicted RBP16.03■□□□□ 0.16
LMNA-206ENST00000368300 LTKP29376 864 aa16.03■□□□□ 0.16
LMNA-206ENST00000368300 SLC26A8Q96RN1 970 aa16.03■□□□□ 0.16
LMNA-206ENST00000368300 SHPRHQ149N8 1683 aa16.03■□□□□ 0.16
LMNA-206ENST00000368300 TRHP20396 242 aaPredicted RBP16.03■□□□□ 0.16
LMNA-206ENST00000368300 BCL2L13Q9BXK5 485 aa16.03■□□□□ 0.16
LMNA-206ENST00000368300 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.03■□□□□ 0.16
LMNA-206ENST00000368300 FANCIQ9NVI1 1328 aa16.02■□□□□ 0.16
LMNA-206ENST00000368300 FRAT1Q92837 279 aaPredicted RBP16.02■□□□□ 0.15
LMNA-206ENST00000368300 HDGFP51858 240 aaKnown RBP16.01■□□□□ 0.15
LMNA-206ENST00000368300 NME9Q86XW9 330 aa16.01■□□□□ 0.15
LMNA-206ENST00000368300 NGEFQ8N5V2 710 aa16.01■□□□□ 0.15
LMNA-206ENST00000368300 NUDT16Q96DE0 195 aaKnown RBP16.01■□□□□ 0.15
LMNA-206ENST00000368300 USP32Q8NFA0 1604 aa16.01■□□□□ 0.15
LMNA-206ENST00000368300 TMEM2Q9UHN6 1383 aa16■□□□□ 0.15
LMNA-206ENST00000368300 NLRP1Q9C000 1473 aa16■□□□□ 0.15
LMNA-206ENST00000368300 CANXP27824 592 aaKnown RBP15.99■□□□□ 0.15
LMNA-206ENST00000368300 PANK1Q8TE04 598 aa15.99■□□□□ 0.15
LMNA-206ENST00000368300 PHF23Q9BUL5 403 aaPredicted RBP15.99■□□□□ 0.15
LMNA-206ENST00000368300 DIAPH1O60610 1272 aaKnown RBP15.99■□□□□ 0.15
LMNA-206ENST00000368300 EIF5BO60841 1220 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms