RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 PRDM2Q13029 1718 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 FRAT2O75474 233 aaPredicted RBP10.01□□□□□ -0.81
SHPRH-203ENST00000367505 TOMM22Q9NS69 142 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 LTV1Q96GA3 475 aaPredicted RBP10.01□□□□□ -0.81
SHPRH-203ENST00000367505 CLSTN1O94985 981 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 CPLX1O14810 134 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 PDZRN3Q9UPQ7 1066 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 PDCP20941 246 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 G3BP1Q13283 466 aaKnown RBP eCLIP10.01□□□□□ -0.81
SHPRH-203ENST00000367505 WDR63Q8IWG1 891 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 HOMER1Q86YM7 354 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 ZNF592Q92610 1267 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 NAT10Q9H0A0 1025 aaKnown RBP10.01□□□□□ -0.81
SHPRH-203ENST00000367505 TOP2BQ02880 1626 aa10.01□□□□□ -0.81
SHPRH-203ENST00000367505 VPS37CA5D8V6 355 aaPredicted RBP10□□□□□ -0.81
SHPRH-203ENST00000367505 WDR97A6NE52 1622 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 RAD54L2Q9Y4B4 1467 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 GNAI3P08754 354 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 CFTRP13569 1480 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 PSMA5P28066 241 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 MTHFSP49914 203 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 CCAR2Q8N163 923 aaKnown RBP10□□□□□ -0.81
SHPRH-203ENST00000367505 CEP89Q96ST8 783 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 CREBRFQ8IUR6 639 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 ABCF1Q8NE71 845 aaKnown RBP eCLIP10□□□□□ -0.81
SHPRH-203ENST00000367505 TRDNQ13061 729 aa10□□□□□ -0.81
SHPRH-203ENST00000367505 DHX8Q14562 1220 aaKnown RBP9.99□□□□□ -0.81
SHPRH-203ENST00000367505 CCDC47Q96A33 483 aaKnown RBP9.99□□□□□ -0.81
SHPRH-203ENST00000367505 ACBD3Q9H3P7 528 aa9.99□□□□□ -0.81
SHPRH-203ENST00000367505 ZNF428Q96B54 188 aa9.99□□□□□ -0.81
SHPRH-203ENST00000367505 IFT57Q9NWB7 429 aa9.99□□□□□ -0.81
SHPRH-203ENST00000367505 TSPYL4Q9UJ04 414 aa9.98□□□□□ -0.81
SHPRH-203ENST00000367505 PES1O00541 588 aaKnown RBP9.98□□□□□ -0.81
SHPRH-203ENST00000367505 TMX4Q9H1E5 349 aaPredicted RBP9.98□□□□□ -0.81
SHPRH-203ENST00000367505 R3HCC1Q9Y3T6 440 aaKnown RBP9.98□□□□□ -0.81
SHPRH-203ENST00000367505 SUPT6HQ7KZ85 1726 aaKnown RBP9.98□□□□□ -0.81
SHPRH-203ENST00000367505 PLEKHH2Q8IVE3 1493 aa9.98□□□□□ -0.81
SHPRH-203ENST00000367505 BRPF3Q9ULD4 1205 aa9.98□□□□□ -0.81
SHPRH-203ENST00000367505 NBPF8Q3BBV2 869 aa9.97□□□□□ -0.81
SHPRH-203ENST00000367505 CNTROBQ8N137 903 aa9.97□□□□□ -0.81
SHPRH-203ENST00000367505 CAVIN1Q6NZI2 390 aaKnown RBP9.97□□□□□ -0.81
SHPRH-203ENST00000367505 HIP1O00291 1037 aa9.97□□□□□ -0.81
SHPRH-203ENST00000367505 TTC5Q8N0Z6 440 aa9.97□□□□□ -0.81
SHPRH-203ENST00000367505 MNS1Q8NEH6 495 aa9.97□□□□□ -0.81
SHPRH-203ENST00000367505 TSPY26PQ9H489 355 aa9.97□□□□□ -0.81
SHPRH-203ENST00000367505 UBTFL1P0CB47 393 aaPredicted RBP9.97□□□□□ -0.81
SHPRH-203ENST00000367505 MARCH6O60337 910 aa9.96□□□□□ -0.81
SHPRH-203ENST00000367505 PDIA4P13667 645 aaKnown RBP9.96□□□□□ -0.81
SHPRH-203ENST00000367505 EIF2S2P20042 333 aaKnown RBP9.96□□□□□ -0.81
SHPRH-203ENST00000367505 MAP3K1Q13233 1512 aa9.96□□□□□ -0.81
SHPRH-203ENST00000367505 HECW1Q76N89 1606 aa9.96□□□□□ -0.82
SHPRH-203ENST00000367505 SAFBQ15424 915 aaKnown RBP eCLIP9.96□□□□□ -0.82
SHPRH-203ENST00000367505 CCP110O43303 1012 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 NEK4P51957 841 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 CLASRPQ8N2M8 674 aaKnown RBP9.95□□□□□ -0.82
SHPRH-203ENST00000367505 GRIN2BQ13224 1484 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 K7ELQ4 463 aaPredicted RBP9.95□□□□□ -0.82
SHPRH-203ENST00000367505 C9orf84Q5VXU9 1444 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 NUTM2FA1L443 756 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 GRPEL1Q9HAV7 217 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 MCM4P33991 863 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 EXOSC9Q06265 439 aaKnown RBP9.95□□□□□ -0.82
SHPRH-203ENST00000367505 MVPQ14764 893 aaKnown RBP9.95□□□□□ -0.82
SHPRH-203ENST00000367505 WWC1Q8IX03 1113 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 GGNBP2Q9H3C7 697 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 NOM1Q5C9Z4 860 aaKnown RBP9.95□□□□□ -0.82
SHPRH-203ENST00000367505 ATF7IPQ6VMQ6 1270 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 ERBINQ96RT1 1412 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 SYNJ2O15056 1496 aa9.95□□□□□ -0.82
SHPRH-203ENST00000367505 CCDC30Q5VVM6 783 aa9.94□□□□□ -0.82
SHPRH-203ENST00000367505 CCDC66A2RUB6 948 aa9.94□□□□□ -0.82
SHPRH-203ENST00000367505 HSP90B2PQ58FF3 399 aa9.94□□□□□ -0.82
SHPRH-203ENST00000367505 NAIPQ13075 1403 aa9.94□□□□□ -0.82
SHPRH-203ENST00000367505 TROQ12816 1431 aaPredicted RBP9.94□□□□□ -0.82
SHPRH-203ENST00000367505 PRPF40AO75400 957 aaKnown RBP9.94□□□□□ -0.82
SHPRH-203ENST00000367505 HMOX1P09601 288 aa9.94□□□□□ -0.82
SHPRH-203ENST00000367505 GAS2L2Q8NHY3 880 aa9.94□□□□□ -0.82
SHPRH-203ENST00000367505 SDF4Q9BRK5 362 aa9.94□□□□□ -0.82
SHPRH-203ENST00000367505 WDR33Q9C0J8 1336 aaKnown RBP9.93□□□□□ -0.82
SHPRH-203ENST00000367505 RNF214Q8ND24 703 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 ARHGAP5Q13017 1502 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 GTF2E1P29083 439 aaPredicted RBP9.93□□□□□ -0.82
SHPRH-203ENST00000367505 RALYLQ86SE5 291 aaKnown RBP9.93□□□□□ -0.82
SHPRH-203ENST00000367505 BCAR3O75815 825 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 OLFM4Q6UX06 510 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 ERC1Q8IUD2 1116 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 AEBP1Q8IUX7 1158 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 AMOTL1Q8IY63 956 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 IL27Q8NEV9 243 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 TRIM5Q9C035 493 aa9.93□□□□□ -0.82
SHPRH-203ENST00000367505 RRP9O43818 475 aaKnown RBP9.93□□□□□ -0.82
SHPRH-203ENST00000367505 TWISTNBQ3B726 338 aaPredicted RBP9.93□□□□□ -0.82
SHPRH-203ENST00000367505 ESPNB1AK53 854 aa9.92□□□□□ -0.82
SHPRH-203ENST00000367505 KINO60870 393 aaKnown RBP9.92□□□□□ -0.82
SHPRH-203ENST00000367505 CDR1P51861 262 aa9.92□□□□□ -0.82
SHPRH-203ENST00000367505 ERICH2A1L162 156 aa9.92□□□□□ -0.82
SHPRH-203ENST00000367505 SRCIN1Q9C0H9 1055 aa9.92□□□□□ -0.82
SHPRH-203ENST00000367505 DAPK1P53355 1430 aa9.92□□□□□ -0.82
SHPRH-203ENST00000367505 GNAI2P04899 355 aa9.92□□□□□ -0.82
SHPRH-203ENST00000367505 NBPF1Q3BBV0 1214 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms