RNA–Protein interactions for RNA: ENST00000367427.7

CFHR3-202, Transcript of complement factor H related 3, humanhuman

TSL 5

Gene CFHR3, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-202ENST00000367427 CD46P15529 392 aa14.49□□□□□ -0.09
CFHR3-202ENST00000367427 LCE2AQ5TA79 106 aaPredicted RBP14.49□□□□□ -0.09
CFHR3-202ENST00000367427 GRIPAP1Q4V328 841 aa14.47□□□□□ -0.09
CFHR3-202ENST00000367427 CYP4X1Q8N118 509 aa14.47□□□□□ -0.09
CFHR3-202ENST00000367427 MMP16P51512 607 aa14.46□□□□□ -0.09
CFHR3-202ENST00000367427 SMCPP49901 116 aaPredicted RBP14.45□□□□□ -0.1
CFHR3-202ENST00000367427 MAP2K5Q13163 448 aa14.44□□□□□ -0.1
CFHR3-202ENST00000367427 TREML4Q6UXN2 200 aa14.43□□□□□ -0.1
CFHR3-202ENST00000367427 CTC1Q2NKJ3 1217 aa14.42□□□□□ -0.1
CFHR3-202ENST00000367427 Q3C1V9 767 aa14.42□□□□□ -0.1
CFHR3-202ENST00000367427 WNT7AO00755 349 aa14.41□□□□□ -0.1
CFHR3-202ENST00000367427 ZBTB24O43167 697 aaPredicted RBP14.41□□□□□ -0.1
CFHR3-202ENST00000367427 IRF6O14896 467 aa14.4□□□□□ -0.1
CFHR3-202ENST00000367427 AXIN1O15169 862 aa14.4□□□□□ -0.1
CFHR3-202ENST00000367427 KDM4AO75164 1064 aa14.39□□□□□ -0.11
CFHR3-202ENST00000367427 DXOO77932 396 aaKnown RBP14.38□□□□□ -0.11
CFHR3-202ENST00000367427 TRIM32Q13049 653 aa14.38□□□□□ -0.11
CFHR3-202ENST00000367427 USB1Q9BQ65 265 aaKnown RBP14.38□□□□□ -0.11
CFHR3-202ENST00000367427 GMPR2Q9P2T1 348 aaKnown RBP14.38□□□□□ -0.11
CFHR3-202ENST00000367427 SMPD1P17405 629 aa14.37□□□□□ -0.11
CFHR3-202ENST00000367427 SNIP1Q8TAD8 396 aaKnown RBP14.36□□□□□ -0.11
CFHR3-202ENST00000367427 TTC24A2A3L6 582 aaPredicted RBP14.35□□□□□ -0.11
CFHR3-202ENST00000367427 HLA-CQ95604 372 aa14.35□□□□□ -0.11
CFHR3-202ENST00000367427 MINK1Q8N4C8 1332 aaPredicted RBP14.34□□□□□ -0.11
CFHR3-202ENST00000367427 USP46P62068 366 aa14.33□□□□□ -0.12
CFHR3-202ENST00000367427 MDM2Q00987 491 aaPredicted RBP14.33□□□□□ -0.12
CFHR3-202ENST00000367427 MRGPRX2Q96LB1 330 aa14.33□□□□□ -0.12
CFHR3-202ENST00000367427 HOXA2O43364 376 aa14.31□□□□□ -0.12
CFHR3-202ENST00000367427 C11orf95C9JLR9 678 aaPredicted RBP14.3□□□□□ -0.12
CFHR3-202ENST00000367427 J3QL48 77 aa14.29□□□□□ -0.12
CFHR3-202ENST00000367427 SKOR1P84550 965 aa14.27□□□□□ -0.13
CFHR3-202ENST00000367427 CCDC102AQ96A19 550 aa14.26□□□□□ -0.13
CFHR3-202ENST00000367427 GUCA2AQ02747 115 aa14.25□□□□□ -0.13
CFHR3-202ENST00000367427 ATP13A2Q9NQ11 1180 aa14.25□□□□□ -0.13
CFHR3-202ENST00000367427 FAM217BQ9NTX9 383 aaPredicted RBP14.25□□□□□ -0.13
CFHR3-202ENST00000367427 NFX1Q12986 1120 aaKnown RBP14.24□□□□□ -0.13
CFHR3-202ENST00000367427 WFS1O76024 890 aa14.23□□□□□ -0.13
CFHR3-202ENST00000367427 RC3H1Q5TC82 1133 aaKnown RBP14.23□□□□□ -0.13
CFHR3-202ENST00000367427 REPIN1Q9BWE0 567 aaKnown RBP14.23□□□□□ -0.13
CFHR3-202ENST00000367427 GPCPD1Q9NPB8 672 aa14.23□□□□□ -0.13
CFHR3-202ENST00000367427 WNT7BP56706 349 aa14.22□□□□□ -0.13
CFHR3-202ENST00000367427 CCDC24Q8N4L8 307 aa14.22□□□□□ -0.13
CFHR3-202ENST00000367427 SYMPKQ92797 1274 aaKnown RBP14.22□□□□□ -0.13
CFHR3-202ENST00000367427 HPS1Q92902 700 aa14.22□□□□□ -0.13
CFHR3-202ENST00000367427 JUNDP17535 347 aa14.21□□□□□ -0.13
CFHR3-202ENST00000367427 CLCN1P35523 988 aa14.2□□□□□ -0.14
CFHR3-202ENST00000367427 TULP1O00294 542 aaPredicted RBP14.19□□□□□ -0.14
CFHR3-202ENST00000367427 SNRPBP14678 240 aaKnown RBP14.19□□□□□ -0.14
CFHR3-202ENST00000367427 PTCRAQ6ISU1 281 aaPredicted RBP14.17□□□□□ -0.14
CFHR3-202ENST00000367427 TRIM47Q96LD4 638 aa14.17□□□□□ -0.14
CFHR3-202ENST00000367427 LCE2CQ5TA81 110 aa14.16□□□□□ -0.14
CFHR3-202ENST00000367427 RETREG3Q86VR2 466 aa14.16□□□□□ -0.14
CFHR3-202ENST00000367427 SIAH2O43255 324 aa14.15□□□□□ -0.14
CFHR3-202ENST00000367427 PCDHGC3Q9UN70 934 aa14.15□□□□□ -0.14
CFHR3-202ENST00000367427 WIPF1O43516 503 aa14.14□□□□□ -0.15
CFHR3-202ENST00000367427 SENP2Q9HC62 589 aa14.14□□□□□ -0.15
CFHR3-202ENST00000367427 NUTM1Q86Y26 1132 aa14.12□□□□□ -0.15
CFHR3-202ENST00000367427 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.11□□□□□ -0.15
CFHR3-202ENST00000367427 NUDT12Q9BQG2 462 aa14.11□□□□□ -0.15
CFHR3-202ENST00000367427 FDX1P10109 184 aa14.09□□□□□ -0.15
CFHR3-202ENST00000367427 TERTO14746 1132 aaKnown RBP14.08□□□□□ -0.16
CFHR3-202ENST00000367427 ALDH1A1P00352 501 aa14.08□□□□□ -0.16
CFHR3-202ENST00000367427 SPIRE2Q8WWL2 714 aa14.07□□□□□ -0.16
CFHR3-202ENST00000367427 KIFC2Q96AC6 838 aa14.07□□□□□ -0.16
CFHR3-202ENST00000367427 SSTR3P32745 418 aaPredicted RBP14.06□□□□□ -0.16
CFHR3-202ENST00000367427 GTF3C3Q9Y5Q9 886 aa14.06□□□□□ -0.16
CFHR3-202ENST00000367427 SH3BP2P78314 561 aa14.05□□□□□ -0.16
CFHR3-202ENST00000367427 KRI1Q8N9T8 703 aaKnown RBP14.04□□□□□ -0.16
CFHR3-202ENST00000367427 CCNYL3P0C7X3 344 aa14.03□□□□□ -0.16
CFHR3-202ENST00000367427 C6orf229H3BNL8 230 aa14.02□□□□□ -0.17
CFHR3-202ENST00000367427 MS4A1P11836 297 aa14.02□□□□□ -0.17
CFHR3-202ENST00000367427 EHBP1Q8NDI1 1231 aa14.02□□□□□ -0.17
CFHR3-202ENST00000367427 EVA1BQ9NVM1 165 aa14.02□□□□□ -0.17
CFHR3-202ENST00000367427 TIMELESSQ9UNS1 1208 aa14.02□□□□□ -0.17
CFHR3-202ENST00000367427 NDUFV2P19404 249 aa14.01□□□□□ -0.17
CFHR3-202ENST00000367427 STK17AQ9UEE5 414 aa14.01□□□□□ -0.17
CFHR3-202ENST00000367427 PTPRNQ16849 979 aa14□□□□□ -0.17
CFHR3-202ENST00000367427 TRIM46Q7Z4K8 759 aa14□□□□□ -0.17
CFHR3-202ENST00000367427 MOXD2PA6NHM9 499 aa13.99□□□□□ -0.17
CFHR3-202ENST00000367427 INSM1Q01101 510 aaPredicted RBP13.99□□□□□ -0.17
CFHR3-202ENST00000367427 BARGINQ6ZT62 677 aa13.99□□□□□ -0.17
CFHR3-202ENST00000367427 UNC93B1Q9H1C4 597 aa13.98□□□□□ -0.17
CFHR3-202ENST00000367427 AMHR2Q16671 573 aa13.97□□□□□ -0.17
CFHR3-202ENST00000367427 ZMYND10O75800 440 aa13.96□□□□□ -0.17
CFHR3-202ENST00000367427 KCNH2Q12809 1159 aa13.96□□□□□ -0.17
CFHR3-202ENST00000367427 TMEM132AQ24JP5 1023 aa13.96□□□□□ -0.17
CFHR3-202ENST00000367427 ERICH6Q7L0X2 663 aa13.96□□□□□ -0.17
CFHR3-202ENST00000367427 DESI1Q6ICB0 168 aa13.95□□□□□ -0.18
CFHR3-202ENST00000367427 PRR7Q8TB68 274 aa13.95□□□□□ -0.18
CFHR3-202ENST00000367427 BAP1Q92560 729 aa13.95□□□□□ -0.18
CFHR3-202ENST00000367427 CAPN5O15484 640 aaPredicted RBP13.94□□□□□ -0.18
CFHR3-202ENST00000367427 BMP1P13497 986 aa13.94□□□□□ -0.18
CFHR3-202ENST00000367427 WASF2Q9Y6W5 498 aa13.94□□□□□ -0.18
CFHR3-202ENST00000367427 MPNDQ8N594 471 aa13.93□□□□□ -0.18
CFHR3-202ENST00000367427 SPDYE5A6NIY4 337 aa13.91□□□□□ -0.18
CFHR3-202ENST00000367427 MTMR2Q13614 643 aa13.91□□□□□ -0.18
CFHR3-202ENST00000367427 NXF1Q9UBU9 619 aaKnown RBP13.91□□□□□ -0.18
CFHR3-202ENST00000367427 GJA5P36382 358 aa13.9□□□□□ -0.18
CFHR3-202ENST00000367427 LINC01559Q495D7 138 aa13.9□□□□□ -0.18
CFHR3-202ENST00000367427 GIGYF2Q6Y7W6 1299 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms