RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 NWD1Q149M9 1564 aa14.18□□□□□ -0.14
NUP43-202ENST00000367402 IQSEC2Q5JU85 1478 aa14.18□□□□□ -0.14
NUP43-202ENST00000367402 CLSPNQ9HAW4 1339 aa14.17□□□□□ -0.14
NUP43-202ENST00000367402 TOM1O60784 492 aa14.17□□□□□ -0.14
NUP43-202ENST00000367402 FBXO41Q8TF61 875 aa14.17□□□□□ -0.14
NUP43-202ENST00000367402 CHD2O14647 1828 aaKnown RBP14.16□□□□□ -0.14
NUP43-202ENST00000367402 HAX1O00165 279 aa14.16□□□□□ -0.14
NUP43-202ENST00000367402 FXR2P51116 673 aaKnown RBP eCLIP14.16□□□□□ -0.14
NUP43-202ENST00000367402 LRPPRCP42704 1394 aaKnown RBP14.16□□□□□ -0.14
NUP43-202ENST00000367402 SPDYE2BA6NHP3 402 aa14.15□□□□□ -0.14
NUP43-202ENST00000367402 SPDYE6P0CI01 402 aa14.15□□□□□ -0.14
NUP43-202ENST00000367402 SPDYE2Q495Y8 402 aa14.15□□□□□ -0.14
NUP43-202ENST00000367402 PRAG1Q86YV5 1406 aa14.15□□□□□ -0.14
NUP43-202ENST00000367402 YTHDC2Q9H6S0 1430 aaKnown RBP14.15□□□□□ -0.14
NUP43-202ENST00000367402 MSH6P52701 1360 aa14.14□□□□□ -0.15
NUP43-202ENST00000367402 ABCC11Q96J66 1382 aa14.14□□□□□ -0.15
NUP43-202ENST00000367402 ROBO2Q9HCK4 1378 aa14.14□□□□□ -0.15
NUP43-202ENST00000367402 SETD1AO15047 1707 aaKnown RBP14.13□□□□□ -0.15
NUP43-202ENST00000367402 PIP4K2BP78356 416 aa14.13□□□□□ -0.15
NUP43-202ENST00000367402 NBPF1Q3BBV0 1214 aa14.13□□□□□ -0.15
NUP43-202ENST00000367402 WAPLQ7Z5K2 1190 aa14.13□□□□□ -0.15
NUP43-202ENST00000367402 C19orf44Q9H6X5 657 aa14.13□□□□□ -0.15
NUP43-202ENST00000367402 TRAK1Q9UPV9 953 aa14.13□□□□□ -0.15
NUP43-202ENST00000367402 NCOA3Q9Y6Q9 1424 aa14.13□□□□□ -0.15
NUP43-202ENST00000367402 ATF3P18847 181 aa14.12□□□□□ -0.15
NUP43-202ENST00000367402 ILDR1Q86SU0 546 aaPredicted RBP14.12□□□□□ -0.15
NUP43-202ENST00000367402 PTCH1Q13635 1447 aa14.12□□□□□ -0.15
NUP43-202ENST00000367402 XRN1Q8IZH2 1706 aaKnown RBP14.12□□□□□ -0.15
NUP43-202ENST00000367402 ASXL1Q8IXJ9 1541 aa14.11□□□□□ -0.15
NUP43-202ENST00000367402 NBPF8Q3BBV2 869 aa14.11□□□□□ -0.15
NUP43-202ENST00000367402 SIRT1Q96EB6 747 aa14.11□□□□□ -0.15
NUP43-202ENST00000367402 POGKQ9P215 609 aa14.11□□□□□ -0.15
NUP43-202ENST00000367402 LAMC1P11047 1609 aa14.11□□□□□ -0.15
NUP43-202ENST00000367402 PRAM1Q96QH2 718 aa14.1□□□□□ -0.15
NUP43-202ENST00000367402 TIMELESSQ9UNS1 1208 aa14.1□□□□□ -0.15
NUP43-202ENST00000367402 ADGRB1O14514 1584 aa14.09□□□□□ -0.15
NUP43-202ENST00000367402 TECPR2O15040 1411 aa14.09□□□□□ -0.15
NUP43-202ENST00000367402 SAFB2Q14151 953 aaKnown RBP eCLIP14.09□□□□□ -0.15
NUP43-202ENST00000367402 CADPS2Q86UW7 1296 aa14.09□□□□□ -0.15
NUP43-202ENST00000367402 PLEKHH1Q9ULM0 1364 aa14.09□□□□□ -0.15
NUP43-202ENST00000367402 SLAIN2Q9P270 581 aa14.08□□□□□ -0.16
NUP43-202ENST00000367402 ROCK2O75116 1388 aaKnown RBP14.08□□□□□ -0.16
NUP43-202ENST00000367402 FAM135BQ49AJ0 1406 aa14.07□□□□□ -0.16
NUP43-202ENST00000367402 ADGRL3Q9HAR2 1447 aa14.07□□□□□ -0.16
NUP43-202ENST00000367402 XIRP1Q702N8 1843 aaKnown RBP14.06□□□□□ -0.16
NUP43-202ENST00000367402 CARD11Q9BXL7 1154 aa14.04□□□□□ -0.16
NUP43-202ENST00000367402 HIRIP3Q9BW71 556 aaPredicted RBP14.03□□□□□ -0.16
NUP43-202ENST00000367402 MINK1Q8N4C8 1332 aaPredicted RBP14.03□□□□□ -0.16
NUP43-202ENST00000367402 DCCP43146 1447 aa14.03□□□□□ -0.16
NUP43-202ENST00000367402 DLC1Q96QB1 1528 aa14.03□□□□□ -0.16
NUP43-202ENST00000367402 KIAA1210Q9ULL0 1709 aa14.03□□□□□ -0.16
NUP43-202ENST00000367402 KNDC1Q76NI1 1749 aa14.01□□□□□ -0.17
NUP43-202ENST00000367402 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.01□□□□□ -0.17
NUP43-202ENST00000367402 NUTM2FA1L443 756 aa14.01□□□□□ -0.17
NUP43-202ENST00000367402 CENPJQ9HC77 1338 aaPredicted RBP14□□□□□ -0.17
NUP43-202ENST00000367402 TRPM1Q7Z4N2 1603 aa14□□□□□ -0.17
NUP43-202ENST00000367402 MST1RQ04912 1400 aa13.99□□□□□ -0.17
NUP43-202ENST00000367402 GPRASP1Q5JY77 1395 aa13.99□□□□□ -0.17
NUP43-202ENST00000367402 NALCNQ8IZF0 1738 aa13.99□□□□□ -0.17
NUP43-202ENST00000367402 HSPA1LP34931 641 aa13.99□□□□□ -0.17
NUP43-202ENST00000367402 RALGAPBQ86X10 1494 aa13.99□□□□□ -0.17
NUP43-202ENST00000367402 ESCO1Q5FWF5 840 aa13.98□□□□□ -0.17
NUP43-202ENST00000367402 BRINP3Q76B58 766 aa13.98□□□□□ -0.17
NUP43-202ENST00000367402 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
NUP43-202ENST00000367402 EIF3AQ14152 1382 aaKnown RBP13.97□□□□□ -0.17
NUP43-202ENST00000367402 WASLO00401 505 aaPredicted RBP13.97□□□□□ -0.17
NUP43-202ENST00000367402 ORAI2Q96SN7 254 aa13.97□□□□□ -0.17
NUP43-202ENST00000367402 C1orf167Q5SNV9 1468 aa13.97□□□□□ -0.17
NUP43-202ENST00000367402 CDK19Q9BWU1 502 aa13.95□□□□□ -0.18
NUP43-202ENST00000367402 CLEC11AQ9Y240 323 aa13.95□□□□□ -0.18
NUP43-202ENST00000367402 CDC42BPGQ6DT37 1551 aa13.95□□□□□ -0.18
NUP43-202ENST00000367402 ARHGEF28Q8N1W1 1705 aaKnown RBP13.94□□□□□ -0.18
NUP43-202ENST00000367402 ROBO1Q9Y6N7 1651 aa13.94□□□□□ -0.18
NUP43-202ENST00000367402 SRPK2P78362 688 aaKnown RBP13.93□□□□□ -0.18
NUP43-202ENST00000367402 DDX17Q92841 729 aaKnown RBP13.93□□□□□ -0.18
NUP43-202ENST00000367402 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
NUP43-202ENST00000367402 ST20-MTHFSA0A0A6YYL1 179 aa13.91□□□□□ -0.18
NUP43-202ENST00000367402 FOXO3O43524 673 aa13.91□□□□□ -0.18
NUP43-202ENST00000367402 NUDT16Q96DE0 195 aaKnown RBP13.91□□□□□ -0.18
NUP43-202ENST00000367402 CABP2Q9NPB3 220 aa13.91□□□□□ -0.18
NUP43-202ENST00000367402 PHF8Q9UPP1 1060 aa13.91□□□□□ -0.18
NUP43-202ENST00000367402 EVC2Q86UK5 1308 aa13.9□□□□□ -0.18
NUP43-202ENST00000367402 PRKAR2AP13861 404 aaKnown RBP13.9□□□□□ -0.18
NUP43-202ENST00000367402 PMFBP1Q8TBY8 1022 aa13.9□□□□□ -0.18
NUP43-202ENST00000367402 ADGRB2O60241 1585 aa13.9□□□□□ -0.18
NUP43-202ENST00000367402 PRR36Q9H6K5 1346 aa13.9□□□□□ -0.19
NUP43-202ENST00000367402 USP47Q96K76 1375 aa13.89□□□□□ -0.19
NUP43-202ENST00000367402 MKRN4PQ13434 485 aaPredicted RBP13.89□□□□□ -0.19
NUP43-202ENST00000367402 ANKARQ7Z5J8 1434 aa13.89□□□□□ -0.19
NUP43-202ENST00000367402 FMN2Q9NZ56 1722 aa13.88□□□□□ -0.19
NUP43-202ENST00000367402 XPCQ01831 940 aaPredicted RBP13.88□□□□□ -0.19
NUP43-202ENST00000367402 CCDC61Q9Y6R9 512 aa13.88□□□□□ -0.19
NUP43-202ENST00000367402 NPHP3Q7Z494 1330 aa13.88□□□□□ -0.19
NUP43-202ENST00000367402 TULP4Q9NRJ4 1543 aa13.87□□□□□ -0.19
NUP43-202ENST00000367402 PSME1Q06323 249 aa13.87□□□□□ -0.19
NUP43-202ENST00000367402 LRRC59Q96AG4 307 aaKnown RBP13.87□□□□□ -0.19
NUP43-202ENST00000367402 SSUH2Q9Y2M2 353 aa13.87□□□□□ -0.19
NUP43-202ENST00000367402 QRICH2Q9H0J4 1663 aa13.86□□□□□ -0.19
NUP43-202ENST00000367402 SLC24A1O60721 1099 aa13.86□□□□□ -0.19
NUP43-202ENST00000367402 NGDNQ8NEJ9 315 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms