RNA–Protein interactions for RNA: ENST00000367379.5

PTPRC-204, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 5

Gene PTPRC, Length 517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-204ENST00000367379 ZNF787Q6DD87 383 aa12.61□□□□□ -0.39
PTPRC-204ENST00000367379 FAM217BQ9NTX9 383 aaPredicted RBP12.61□□□□□ -0.39
PTPRC-204ENST00000367379 CLCN1P35523 988 aa12.6□□□□□ -0.39
PTPRC-204ENST00000367379 HOXA2O43364 376 aa12.59□□□□□ -0.39
PTPRC-204ENST00000367379 FOXC1Q12948 553 aa12.59□□□□□ -0.39
PTPRC-204ENST00000367379 HLA-CQ95604 372 aa12.59□□□□□ -0.39
PTPRC-204ENST00000367379 USB1Q9BQ65 265 aaKnown RBP12.58□□□□□ -0.4
PTPRC-204ENST00000367379 DXOO77932 396 aaKnown RBP12.57□□□□□ -0.4
PTPRC-204ENST00000367379 TOR4AQ9NXH8 423 aa12.57□□□□□ -0.4
PTPRC-204ENST00000367379 REPIN1Q9BWE0 567 aaKnown RBP12.54□□□□□ -0.4
PTPRC-204ENST00000367379 ZBTB24O43167 697 aaPredicted RBP12.53□□□□□ -0.4
PTPRC-204ENST00000367379 GUCA2AQ02747 115 aa12.52□□□□□ -0.41
PTPRC-204ENST00000367379 BARGINQ6ZT62 677 aa12.52□□□□□ -0.41
PTPRC-204ENST00000367379 AAASQ9NRG9 546 aa12.52□□□□□ -0.41
PTPRC-204ENST00000367379 ZMYND10O75800 440 aa12.51□□□□□ -0.41
PTPRC-204ENST00000367379 AVPP01185 164 aa12.51□□□□□ -0.41
PTPRC-204ENST00000367379 CRIPAKQ8N1N5 446 aa12.51□□□□□ -0.41
PTPRC-204ENST00000367379 TRIM32Q13049 653 aa12.5□□□□□ -0.41
PTPRC-204ENST00000367379 POTECB2RU33 542 aa12.49□□□□□ -0.41
PTPRC-204ENST00000367379 WNT7AO00755 349 aa12.49□□□□□ -0.41
PTPRC-204ENST00000367379 ST8SIA5O15466 376 aa12.49□□□□□ -0.41
PTPRC-204ENST00000367379 CYP4X1Q8N118 509 aa12.49□□□□□ -0.41
PTPRC-204ENST00000367379 KRI1Q8N9T8 703 aaKnown RBP12.49□□□□□ -0.41
PTPRC-204ENST00000367379 NUTM1Q86Y26 1132 aa12.47□□□□□ -0.41
PTPRC-204ENST00000367379 ZC3H15Q8WU90 426 aaKnown RBP12.47□□□□□ -0.41
PTPRC-204ENST00000367379 ZNF775Q96BV0 537 aaPredicted RBP12.47□□□□□ -0.41
PTPRC-204ENST00000367379 SSTR3P32745 418 aaPredicted RBP12.46□□□□□ -0.41
PTPRC-204ENST00000367379 AMHR2Q16671 573 aa12.46□□□□□ -0.41
PTPRC-204ENST00000367379 SYMPKQ92797 1274 aaKnown RBP12.46□□□□□ -0.41
PTPRC-204ENST00000367379 JUNDP17535 347 aa12.45□□□□□ -0.42
PTPRC-204ENST00000367379 RETREG3Q86VR2 466 aa12.44□□□□□ -0.42
PTPRC-204ENST00000367379 PCDHGC3Q9UN70 934 aa12.44□□□□□ -0.42
PTPRC-204ENST00000367379 FDX1P10109 184 aa12.43□□□□□ -0.42
PTPRC-204ENST00000367379 SPIRE2Q8WWL2 714 aa12.43□□□□□ -0.42
PTPRC-204ENST00000367379 SMCPP49901 116 aaPredicted RBP12.42□□□□□ -0.42
PTPRC-204ENST00000367379 CTC1Q2NKJ3 1217 aa12.42□□□□□ -0.42
PTPRC-204ENST00000367379 SNIP1Q8TAD8 396 aaKnown RBP12.42□□□□□ -0.42
PTPRC-204ENST00000367379 TTC24A2A3L6 582 aaPredicted RBP12.41□□□□□ -0.42
PTPRC-204ENST00000367379 CCDC24Q8N4L8 307 aa12.41□□□□□ -0.42
PTPRC-204ENST00000367379 MRGPRX2Q96LB1 330 aa12.41□□□□□ -0.42
PTPRC-204ENST00000367379 SMPD1P17405 629 aa12.4□□□□□ -0.42
PTPRC-204ENST00000367379 SKOR1P84550 965 aa12.4□□□□□ -0.42
PTPRC-204ENST00000367379 TTLL12Q14166 644 aaPredicted RBP12.4□□□□□ -0.42
PTPRC-204ENST00000367379 DACH1Q9UI36 760 aa12.4□□□□□ -0.42
PTPRC-204ENST00000367379 WNT7BP56706 349 aa12.39□□□□□ -0.43
PTPRC-204ENST00000367379 AXIN1O15169 862 aa12.38□□□□□ -0.43
PTPRC-204ENST00000367379 GIGYF2Q6Y7W6 1299 aaKnown RBP12.38□□□□□ -0.43
PTPRC-204ENST00000367379 MOXD2PA6NHM9 499 aa12.36□□□□□ -0.43
PTPRC-204ENST00000367379 RC3H1Q5TC82 1133 aaKnown RBP12.36□□□□□ -0.43
PTPRC-204ENST00000367379 NUDT12Q9BQG2 462 aa12.36□□□□□ -0.43
PTPRC-204ENST00000367379 C6orf229H3BNL8 230 aa12.35□□□□□ -0.43
PTPRC-204ENST00000367379 NDUFV2P19404 249 aa12.35□□□□□ -0.43
PTPRC-204ENST00000367379 PTCRAQ6ISU1 281 aaPredicted RBP12.35□□□□□ -0.43
PTPRC-204ENST00000367379 J3QL48 77 aa12.34□□□□□ -0.43
PTPRC-204ENST00000367379 PARP9Q8IXQ6 854 aa12.32□□□□□ -0.44
PTPRC-204ENST00000367379 BEGAINQ9BUH8 593 aa12.32□□□□□ -0.44
PTPRC-204ENST00000367379 GMPR2Q9P2T1 348 aaKnown RBP12.32□□□□□ -0.44
PTPRC-204ENST00000367379 TRIM66O15016 1216 aa12.31□□□□□ -0.44
PTPRC-204ENST00000367379 CCNYL3P0C7X3 344 aa12.31□□□□□ -0.44
PTPRC-204ENST00000367379 MS4A1P11836 297 aa12.31□□□□□ -0.44
PTPRC-204ENST00000367379 GJA5P36382 358 aa12.3□□□□□ -0.44
PTPRC-204ENST00000367379 PTPRNQ16849 979 aa12.3□□□□□ -0.44
PTPRC-204ENST00000367379 SPDYE5A6NIY4 337 aa12.28□□□□□ -0.44
PTPRC-204ENST00000367379 SIAH2O43255 324 aa12.28□□□□□ -0.44
PTPRC-204ENST00000367379 MTMR2Q13614 643 aa12.28□□□□□ -0.44
PTPRC-204ENST00000367379 DESI1Q6ICB0 168 aa12.28□□□□□ -0.44
PTPRC-204ENST00000367379 PRR7Q8TB68 274 aa12.28□□□□□ -0.44
PTPRC-204ENST00000367379 HPS1Q92902 700 aa12.28□□□□□ -0.44
PTPRC-204ENST00000367379 TBC1D2Q9BYX2 928 aa12.28□□□□□ -0.44
PTPRC-204ENST00000367379 LCE2AQ5TA79 106 aaPredicted RBP12.27□□□□□ -0.45
PTPRC-204ENST00000367379 AK7Q96M32 723 aa12.27□□□□□ -0.45
PTPRC-204ENST00000367379 EVA1BQ9NVM1 165 aa12.27□□□□□ -0.45
PTPRC-204ENST00000367379 DIXDC1Q155Q3 683 aa12.26□□□□□ -0.45
PTPRC-204ENST00000367379 RSBN1LQ6PCB5 846 aaPredicted RBP12.26□□□□□ -0.45
PTPRC-204ENST00000367379 ATP13A2Q9NQ11 1180 aa12.26□□□□□ -0.45
PTPRC-204ENST00000367379 C11orf95C9JLR9 678 aaPredicted RBP12.25□□□□□ -0.45
PTPRC-204ENST00000367379 SH3BP2P78314 561 aa12.25□□□□□ -0.45
PTPRC-204ENST00000367379 TREML4Q6UXN2 200 aa12.24□□□□□ -0.45
PTPRC-204ENST00000367379 SPTLC1O15269 473 aa12.23□□□□□ -0.45
PTPRC-204ENST00000367379 KCNH2Q12809 1159 aa12.23□□□□□ -0.45
PTPRC-204ENST00000367379 EHBP1Q8NDI1 1231 aa12.23□□□□□ -0.45
PTPRC-204ENST00000367379 UNC93B1Q9H1C4 597 aa12.23□□□□□ -0.45
PTPRC-204ENST00000367379 PCDHB15Q9Y5E8 787 aa12.22□□□□□ -0.45
PTPRC-204ENST00000367379 ALDH1A1P00352 501 aa12.21□□□□□ -0.45
PTPRC-204ENST00000367379 CFAP99D6REC4 459 aa12.18□□□□□ -0.46
PTPRC-204ENST00000367379 LYPD8Q6UX82 237 aa12.18□□□□□ -0.46
PTPRC-204ENST00000367379 BAP1Q92560 729 aa12.18□□□□□ -0.46
PTPRC-204ENST00000367379 TRIM47Q96LD4 638 aa12.18□□□□□ -0.46
PTPRC-204ENST00000367379 HRCP23327 699 aa12.17□□□□□ -0.46
PTPRC-204ENST00000367379 PRPF38BQ5VTL8 546 aaKnown RBP12.17□□□□□ -0.46
PTPRC-204ENST00000367379 ZBTB3Q9H5J0 574 aa12.17□□□□□ -0.46
PTPRC-204ENST00000367379 SENP2Q9HC62 589 aa12.17□□□□□ -0.46
PTPRC-204ENST00000367379 SNRPBP14678 240 aaKnown RBP12.16□□□□□ -0.46
PTPRC-204ENST00000367379 PDE4DQ08499 809 aa12.16□□□□□ -0.46
PTPRC-204ENST00000367379 LINC01559Q495D7 138 aa12.16□□□□□ -0.46
PTPRC-204ENST00000367379 RIC3Q7Z5B4 369 aa12.16□□□□□ -0.46
PTPRC-204ENST00000367379 ZNF511Q8NB15 262 aa12.16□□□□□ -0.46
PTPRC-204ENST00000367379 MPNDQ8N594 471 aa12.14□□□□□ -0.47
PTPRC-204ENST00000367379 NFX1Q12986 1120 aaKnown RBP12.13□□□□□ -0.47
PTPRC-204ENST00000367379 WASF2Q9Y6W5 498 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms