RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 ST8SIA5O15466 376 aa12.45□□□□□ -0.42
RNU4-40P-201ENST00000364351 ZNF775Q96BV0 537 aaPredicted RBP12.45□□□□□ -0.42
RNU4-40P-201ENST00000364351 POTECB2RU33 542 aa12.44□□□□□ -0.42
RNU4-40P-201ENST00000364351 CYP4X1Q8N118 509 aa12.44□□□□□ -0.42
RNU4-40P-201ENST00000364351 USB1Q9BQ65 265 aaKnown RBP12.44□□□□□ -0.42
RNU4-40P-201ENST00000364351 USP46P62068 366 aa12.43□□□□□ -0.42
RNU4-40P-201ENST00000364351 KRI1Q8N9T8 703 aaKnown RBP12.43□□□□□ -0.42
RNU4-40P-201ENST00000364351 GPCPD1Q9NPB8 672 aa12.43□□□□□ -0.42
RNU4-40P-201ENST00000364351 AAASQ9NRG9 546 aa12.43□□□□□ -0.42
RNU4-40P-201ENST00000364351 CLCN1P35523 988 aa12.42□□□□□ -0.42
RNU4-40P-201ENST00000364351 MMP16P51512 607 aa12.42□□□□□ -0.42
RNU4-40P-201ENST00000364351 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.42□□□□□ -0.42
RNU4-40P-201ENST00000364351 TOR4AQ9NXH8 423 aa12.42□□□□□ -0.42
RNU4-40P-201ENST00000364351 HOXA2O43364 376 aa12.4□□□□□ -0.42
RNU4-40P-201ENST00000364351 GUCA2AQ02747 115 aa12.4□□□□□ -0.42
RNU4-40P-201ENST00000364351 FAM217BQ9NTX9 383 aaPredicted RBP12.4□□□□□ -0.42
RNU4-40P-201ENST00000364351 CCDC24Q8N4L8 307 aa12.39□□□□□ -0.43
RNU4-40P-201ENST00000364351 TTC24A2A3L6 582 aaPredicted RBP12.38□□□□□ -0.43
RNU4-40P-201ENST00000364351 DXOO77932 396 aaKnown RBP12.38□□□□□ -0.43
RNU4-40P-201ENST00000364351 TRIM32Q13049 653 aa12.38□□□□□ -0.43
RNU4-40P-201ENST00000364351 NUTM1Q86Y26 1132 aa12.37□□□□□ -0.43
RNU4-40P-201ENST00000364351 SYMPKQ92797 1274 aaKnown RBP12.36□□□□□ -0.43
RNU4-40P-201ENST00000364351 WNT7AO00755 349 aa12.34□□□□□ -0.43
RNU4-40P-201ENST00000364351 AVPP01185 164 aa12.34□□□□□ -0.43
RNU4-40P-201ENST00000364351 REPIN1Q9BWE0 567 aaKnown RBP12.34□□□□□ -0.43
RNU4-40P-201ENST00000364351 DACH1Q9UI36 760 aa12.34□□□□□ -0.43
RNU4-40P-201ENST00000364351 AXIN1O15169 862 aa12.33□□□□□ -0.44
RNU4-40P-201ENST00000364351 CRIPAKQ8N1N5 446 aa12.32□□□□□ -0.44
RNU4-40P-201ENST00000364351 SNIP1Q8TAD8 396 aaKnown RBP12.31□□□□□ -0.44
RNU4-40P-201ENST00000364351 MRGPRX2Q96LB1 330 aa12.31□□□□□ -0.44
RNU4-40P-201ENST00000364351 SSTR3P32745 418 aaPredicted RBP12.3□□□□□ -0.44
RNU4-40P-201ENST00000364351 JUNDP17535 347 aa12.29□□□□□ -0.44
RNU4-40P-201ENST00000364351 CTC1Q2NKJ3 1217 aa12.29□□□□□ -0.44
RNU4-40P-201ENST00000364351 FDX1P10109 184 aa12.28□□□□□ -0.44
RNU4-40P-201ENST00000364351 SMPD1P17405 629 aa12.28□□□□□ -0.44
RNU4-40P-201ENST00000364351 J3QL48 77 aa12.27□□□□□ -0.45
RNU4-40P-201ENST00000364351 TTLL12Q14166 644 aaPredicted RBP12.27□□□□□ -0.45
RNU4-40P-201ENST00000364351 BARGINQ6ZT62 677 aa12.27□□□□□ -0.45
RNU4-40P-201ENST00000364351 RETREG3Q86VR2 466 aa12.27□□□□□ -0.45
RNU4-40P-201ENST00000364351 C6orf229H3BNL8 230 aa12.26□□□□□ -0.45
RNU4-40P-201ENST00000364351 RC3H1Q5TC82 1133 aaKnown RBP12.26□□□□□ -0.45
RNU4-40P-201ENST00000364351 GMPR2Q9P2T1 348 aaKnown RBP12.26□□□□□ -0.45
RNU4-40P-201ENST00000364351 PCDHGC3Q9UN70 934 aa12.26□□□□□ -0.45
RNU4-40P-201ENST00000364351 ZMYND10O75800 440 aa12.25□□□□□ -0.45
RNU4-40P-201ENST00000364351 SMCPP49901 116 aaPredicted RBP12.25□□□□□ -0.45
RNU4-40P-201ENST00000364351 SKOR1P84550 965 aa12.25□□□□□ -0.45
RNU4-40P-201ENST00000364351 SPIRE2Q8WWL2 714 aa12.25□□□□□ -0.45
RNU4-40P-201ENST00000364351 ZC3H15Q8WU90 426 aaKnown RBP12.24□□□□□ -0.45
RNU4-40P-201ENST00000364351 NUDT12Q9BQG2 462 aa12.24□□□□□ -0.45
RNU4-40P-201ENST00000364351 C11orf95C9JLR9 678 aaPredicted RBP12.23□□□□□ -0.45
RNU4-40P-201ENST00000364351 NDUFV2P19404 249 aa12.23□□□□□ -0.45
RNU4-40P-201ENST00000364351 WNT7BP56706 349 aa12.23□□□□□ -0.45
RNU4-40P-201ENST00000364351 PTCRAQ6ISU1 281 aaPredicted RBP12.21□□□□□ -0.45
RNU4-40P-201ENST00000364351 MOXD2PA6NHM9 499 aa12.2□□□□□ -0.46
RNU4-40P-201ENST00000364351 MS4A1P11836 297 aa12.19□□□□□ -0.46
RNU4-40P-201ENST00000364351 AMHR2Q16671 573 aa12.19□□□□□ -0.46
RNU4-40P-201ENST00000364351 GIGYF2Q6Y7W6 1299 aaKnown RBP12.19□□□□□ -0.46
RNU4-40P-201ENST00000364351 HPS1Q92902 700 aa12.19□□□□□ -0.46
RNU4-40P-201ENST00000364351 TREML4Q6UXN2 200 aa12.17□□□□□ -0.46
RNU4-40P-201ENST00000364351 BEGAINQ9BUH8 593 aa12.17□□□□□ -0.46
RNU4-40P-201ENST00000364351 ALDH1A1P00352 501 aa12.16□□□□□ -0.46
RNU4-40P-201ENST00000364351 CCNYL3P0C7X3 344 aa12.16□□□□□ -0.46
RNU4-40P-201ENST00000364351 ATP13A2Q9NQ11 1180 aa12.16□□□□□ -0.46
RNU4-40P-201ENST00000364351 EHBP1Q8NDI1 1231 aa12.15□□□□□ -0.46
RNU4-40P-201ENST00000364351 PRR7Q8TB68 274 aa12.14□□□□□ -0.47
RNU4-40P-201ENST00000364351 MTMR2Q13614 643 aa12.13□□□□□ -0.47
RNU4-40P-201ENST00000364351 PTPRNQ16849 979 aa12.12□□□□□ -0.47
RNU4-40P-201ENST00000364351 SIAH2O43255 324 aa12.11□□□□□ -0.47
RNU4-40P-201ENST00000364351 SH3BP2P78314 561 aa12.11□□□□□ -0.47
RNU4-40P-201ENST00000364351 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
RNU4-40P-201ENST00000364351 EVA1BQ9NVM1 165 aa12.11□□□□□ -0.47
RNU4-40P-201ENST00000364351 SNRPBP14678 240 aaKnown RBP12.1□□□□□ -0.47
RNU4-40P-201ENST00000364351 PARP9Q8IXQ6 854 aa12.1□□□□□ -0.47
RNU4-40P-201ENST00000364351 UNC93B1Q9H1C4 597 aa12.1□□□□□ -0.47
RNU4-40P-201ENST00000364351 SPDYE5A6NIY4 337 aa12.09□□□□□ -0.47
RNU4-40P-201ENST00000364351 TRIM66O15016 1216 aa12.09□□□□□ -0.47
RNU4-40P-201ENST00000364351 LINC01559Q495D7 138 aa12.09□□□□□ -0.47
RNU4-40P-201ENST00000364351 LCE2AQ5TA79 106 aaPredicted RBP12.09□□□□□ -0.47
RNU4-40P-201ENST00000364351 SENP2Q9HC62 589 aa12.09□□□□□ -0.47
RNU4-40P-201ENST00000364351 WFS1O76024 890 aa12.08□□□□□ -0.48
RNU4-40P-201ENST00000364351 KCNH2Q12809 1159 aa12.08□□□□□ -0.48
RNU4-40P-201ENST00000364351 BAP1Q92560 729 aa12.08□□□□□ -0.48
RNU4-40P-201ENST00000364351 WASF2Q9Y6W5 498 aa12.08□□□□□ -0.48
RNU4-40P-201ENST00000364351 DIXDC1Q155Q3 683 aa12.07□□□□□ -0.48
RNU4-40P-201ENST00000364351 TRIM47Q96LD4 638 aa12.07□□□□□ -0.48
RNU4-40P-201ENST00000364351 RSBN1LQ6PCB5 846 aaPredicted RBP12.06□□□□□ -0.48
RNU4-40P-201ENST00000364351 AK7Q96M32 723 aa12.06□□□□□ -0.48
RNU4-40P-201ENST00000364351 PCDHB15Q9Y5E8 787 aa12.06□□□□□ -0.48
RNU4-40P-201ENST00000364351 DESI1Q6ICB0 168 aa12.05□□□□□ -0.48
RNU4-40P-201ENST00000364351 CTHP32929 405 aa12.04□□□□□ -0.48
RNU4-40P-201ENST00000364351 GJA5P36382 358 aa12.04□□□□□ -0.48
RNU4-40P-201ENST00000364351 NFX1Q12986 1120 aaKnown RBP12.03□□□□□ -0.48
RNU4-40P-201ENST00000364351 KIFC2Q96AC6 838 aa12.03□□□□□ -0.48
RNU4-40P-201ENST00000364351 SPTLC1O15269 473 aa12.02□□□□□ -0.49
RNU4-40P-201ENST00000364351 ZNF511Q8NB15 262 aa12.02□□□□□ -0.49
RNU4-40P-201ENST00000364351 CFAP99D6REC4 459 aa12.01□□□□□ -0.49
RNU4-40P-201ENST00000364351 CAPN5O15484 640 aaPredicted RBP12.01□□□□□ -0.49
RNU4-40P-201ENST00000364351 HRCP23327 699 aa12.01□□□□□ -0.49
RNU4-40P-201ENST00000364351 LYPD8Q6UX82 237 aa12.01□□□□□ -0.49
RNU4-40P-201ENST00000364351 RIC3Q7Z5B4 369 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms