RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 AAASQ9NRG9 546 aa4.97□□□□□ -1.61
RNU6-1048P-201ENST00000364054 PKD2L1Q9P0L9 805 aa4.97□□□□□ -1.61
RNU6-1048P-201ENST00000364054 C11orf95C9JLR9 678 aaPredicted RBP4.96□□□□□ -1.62
RNU6-1048P-201ENST00000364054 CD46P15529 392 aa4.96□□□□□ -1.62
RNU6-1048P-201ENST00000364054 CTC1Q2NKJ3 1217 aa4.96□□□□□ -1.62
RNU6-1048P-201ENST00000364054 REPIN1Q9BWE0 567 aaKnown RBP4.96□□□□□ -1.62
RNU6-1048P-201ENST00000364054 FAM160A2Q8N612 972 aaPredicted RBP4.95□□□□□ -1.62
RNU6-1048P-201ENST00000364054 USB1Q9BQ65 265 aaKnown RBP4.95□□□□□ -1.62
RNU6-1048P-201ENST00000364054 GPCPD1Q9NPB8 672 aa4.95□□□□□ -1.62
RNU6-1048P-201ENST00000364054 NUTM1Q86Y26 1132 aa4.94□□□□□ -1.62
RNU6-1048P-201ENST00000364054 CRIPAKQ8N1N5 446 aa4.94□□□□□ -1.62
RNU6-1048P-201ENST00000364054 CCDC24Q8N4L8 307 aa4.94□□□□□ -1.62
RNU6-1048P-201ENST00000364054 MMP16P51512 607 aa4.93□□□□□ -1.62
RNU6-1048P-201ENST00000364054 MDM2Q00987 491 aaPredicted RBP4.93□□□□□ -1.62
RNU6-1048P-201ENST00000364054 TREML4Q6UXN2 200 aa4.93□□□□□ -1.62
RNU6-1048P-201ENST00000364054 RNF19BQ6ZMZ0 732 aa4.93□□□□□ -1.62
RNU6-1048P-201ENST00000364054 PHOX2BQ99453 314 aa4.93□□□□□ -1.62
RNU6-1048P-201ENST00000364054 KDM2AQ9Y2K7 1162 aa4.93□□□□□ -1.62
RNU6-1048P-201ENST00000364054 WNT7AO00755 349 aa4.92□□□□□ -1.62
RNU6-1048P-201ENST00000364054 AVPP01185 164 aa4.92□□□□□ -1.62
RNU6-1048P-201ENST00000364054 TRIM32Q13049 653 aa4.92□□□□□ -1.62
RNU6-1048P-201ENST00000364054 SNIP1Q8TAD8 396 aaKnown RBP4.92□□□□□ -1.62
RNU6-1048P-201ENST00000364054 TOR4AQ9NXH8 423 aa4.92□□□□□ -1.62
RNU6-1048P-201ENST00000364054 GMPR2Q9P2T1 348 aaKnown RBP4.92□□□□□ -1.62
RNU6-1048P-201ENST00000364054 DACH1Q9UI36 760 aa4.92□□□□□ -1.62
RNU6-1048P-201ENST00000364054 WFS1O76024 890 aa4.91□□□□□ -1.62
RNU6-1048P-201ENST00000364054 DXOO77932 396 aaKnown RBP4.91□□□□□ -1.62
RNU6-1048P-201ENST00000364054 SMCPP49901 116 aaPredicted RBP4.91□□□□□ -1.62
RNU6-1048P-201ENST00000364054 WNT7BP56706 349 aa4.91□□□□□ -1.62
RNU6-1048P-201ENST00000364054 DIXDC1Q155Q3 683 aa4.91□□□□□ -1.62
RNU6-1048P-201ENST00000364054 CCDC102AQ96A19 550 aa4.91□□□□□ -1.62
RNU6-1048P-201ENST00000364054 HOXA2O43364 376 aa4.9□□□□□ -1.63
RNU6-1048P-201ENST00000364054 MRGPRX2Q96LB1 330 aa4.9□□□□□ -1.63
RNU6-1048P-201ENST00000364054 SENP2Q9HC62 589 aa4.9□□□□□ -1.63
RNU6-1048P-201ENST00000364054 SPDYE5A6NIY4 337 aa4.89□□□□□ -1.63
RNU6-1048P-201ENST00000364054 RETREG3Q86VR2 466 aa4.89□□□□□ -1.63
RNU6-1048P-201ENST00000364054 FAM217BQ9NTX9 383 aaPredicted RBP4.89□□□□□ -1.63
RNU6-1048P-201ENST00000364054 J3QL48 77 aa4.88□□□□□ -1.63
RNU6-1048P-201ENST00000364054 SMPD1P17405 629 aa4.88□□□□□ -1.63
RNU6-1048P-201ENST00000364054 JUNDP17535 347 aa4.88□□□□□ -1.63
RNU6-1048P-201ENST00000364054 KIFC2Q96AC6 838 aa4.88□□□□□ -1.63
RNU6-1048P-201ENST00000364054 ATP13A2Q9NQ11 1180 aa4.88□□□□□ -1.63
RNU6-1048P-201ENST00000364054 C6orf229H3BNL8 230 aa4.87□□□□□ -1.63
RNU6-1048P-201ENST00000364054 ALDH1A1P00352 501 aa4.87□□□□□ -1.63
RNU6-1048P-201ENST00000364054 FDX1P10109 184 aa4.87□□□□□ -1.63
RNU6-1048P-201ENST00000364054 TTLL12Q14166 644 aaPredicted RBP4.87□□□□□ -1.63
RNU6-1048P-201ENST00000364054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.87□□□□□ -1.63
RNU6-1048P-201ENST00000364054 GJA5P36382 358 aa4.86□□□□□ -1.63
RNU6-1048P-201ENST00000364054 INSM1Q01101 510 aaPredicted RBP4.86□□□□□ -1.63
RNU6-1048P-201ENST00000364054 RC3H1Q5TC82 1133 aaKnown RBP4.86□□□□□ -1.63
RNU6-1048P-201ENST00000364054 EHBP1Q8NDI1 1231 aa4.86□□□□□ -1.63
RNU6-1048P-201ENST00000364054 HPS1Q92902 700 aa4.86□□□□□ -1.63
RNU6-1048P-201ENST00000364054 HLA-CQ95604 372 aa4.86□□□□□ -1.63
RNU6-1048P-201ENST00000364054 NUDT12Q9BQG2 462 aa4.86□□□□□ -1.63
RNU6-1048P-201ENST00000364054 PLEKHG3A1L390 1219 aa4.85□□□□□ -1.63
RNU6-1048P-201ENST00000364054 MS4A1P11836 297 aa4.85□□□□□ -1.63
RNU6-1048P-201ENST00000364054 SNRPBP14678 240 aaKnown RBP4.85□□□□□ -1.63
RNU6-1048P-201ENST00000364054 SSTR3P32745 418 aaPredicted RBP4.85□□□□□ -1.63
RNU6-1048P-201ENST00000364054 GUCA2AQ02747 115 aa4.85□□□□□ -1.63
RNU6-1048P-201ENST00000364054 TRIM47Q96LD4 638 aa4.85□□□□□ -1.63
RNU6-1048P-201ENST00000364054 STK17AQ9UEE5 414 aa4.85□□□□□ -1.63
RNU6-1048P-201ENST00000364054 WASF2Q9Y6W5 498 aa4.85□□□□□ -1.63
RNU6-1048P-201ENST00000364054 CCNYL3P0C7X3 344 aa4.84□□□□□ -1.63
RNU6-1048P-201ENST00000364054 AMHR2Q16671 573 aa4.84□□□□□ -1.63
RNU6-1048P-201ENST00000364054 PTPRNQ16849 979 aa4.84□□□□□ -1.63
RNU6-1048P-201ENST00000364054 DESI1Q6ICB0 168 aa4.84□□□□□ -1.63
RNU6-1048P-201ENST00000364054 BARGINQ6ZT62 677 aa4.84□□□□□ -1.63
RNU6-1048P-201ENST00000364054 SLC16A10Q8TF71 515 aa4.84□□□□□ -1.63
RNU6-1048P-201ENST00000364054 MTMR2Q13614 643 aa4.83□□□□□ -1.64
RNU6-1048P-201ENST00000364054 SYMPKQ92797 1274 aaKnown RBP4.83□□□□□ -1.64
RNU6-1048P-201ENST00000364054 TERTO14746 1132 aaKnown RBP4.82□□□□□ -1.64
RNU6-1048P-201ENST00000364054 ZMYND10O75800 440 aa4.82□□□□□ -1.64
RNU6-1048P-201ENST00000364054 SKOR1P84550 965 aa4.82□□□□□ -1.64
RNU6-1048P-201ENST00000364054 NFX1Q12986 1120 aaKnown RBP4.82□□□□□ -1.64
RNU6-1048P-201ENST00000364054 FAM181BA6NEQ2 426 aa4.81□□□□□ -1.64
RNU6-1048P-201ENST00000364054 CAPN5O15484 640 aaPredicted RBP4.81□□□□□ -1.64
RNU6-1048P-201ENST00000364054 VARSP26640 1264 aaKnown RBP4.81□□□□□ -1.64
RNU6-1048P-201ENST00000364054 LINC01559Q495D7 138 aa4.81□□□□□ -1.64
RNU6-1048P-201ENST00000364054 GIGYF2Q6Y7W6 1299 aaKnown RBP4.81□□□□□ -1.64
RNU6-1048P-201ENST00000364054 SPIRE2Q8WWL2 714 aa4.81□□□□□ -1.64
RNU6-1048P-201ENST00000364054 EVA1BQ9NVM1 165 aa4.81□□□□□ -1.64
RNU6-1048P-201ENST00000364054 BMP1P13497 986 aa4.8□□□□□ -1.64
RNU6-1048P-201ENST00000364054 KCNH2Q12809 1159 aa4.8□□□□□ -1.64
RNU6-1048P-201ENST00000364054 LCE2AQ5TA79 106 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1048P-201ENST00000364054 MPNDQ8N594 471 aa4.8□□□□□ -1.64
RNU6-1048P-201ENST00000364054 PRR7Q8TB68 274 aa4.8□□□□□ -1.64
RNU6-1048P-201ENST00000364054 ZC3H15Q8WU90 426 aaKnown RBP4.8□□□□□ -1.64
RNU6-1048P-201ENST00000364054 AK7Q96M32 723 aa4.8□□□□□ -1.64
RNU6-1048P-201ENST00000364054 BEGAINQ9BUH8 593 aa4.8□□□□□ -1.64
RNU6-1048P-201ENST00000364054 ZBTB3Q9H5J0 574 aa4.8□□□□□ -1.64
RNU6-1048P-201ENST00000364054 WIPF1O43516 503 aa4.79□□□□□ -1.64
RNU6-1048P-201ENST00000364054 PRPF38BQ5VTL8 546 aaKnown RBP4.79□□□□□ -1.64
RNU6-1048P-201ENST00000364054 FAM174AQ8TBP5 190 aa4.79□□□□□ -1.64
RNU6-1048P-201ENST00000364054 UNC93B1Q9H1C4 597 aa4.79□□□□□ -1.64
RNU6-1048P-201ENST00000364054 MOXD2PA6NHM9 499 aa4.78□□□□□ -1.64
RNU6-1048P-201ENST00000364054 CTHP32929 405 aa4.78□□□□□ -1.64
RNU6-1048P-201ENST00000364054 PTCRAQ6ISU1 281 aaPredicted RBP4.78□□□□□ -1.64
RNU6-1048P-201ENST00000364054 NPAS3Q8IXF0 933 aa4.78□□□□□ -1.64
RNU6-1048P-201ENST00000364054 ARMC2Q8NEN0 867 aa4.78□□□□□ -1.64
RNU6-1048P-201ENST00000364054 TBC1D2Q9BYX2 928 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms