RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 FDX1P10109 184 aa5.94□□□□□ -1.46
RNU6-1249P-201ENST00000363237 CTDSPL2Q05D32 466 aa5.94□□□□□ -1.46
RNU6-1249P-201ENST00000363237 RSPH4AQ5TD94 716 aa5.94□□□□□ -1.46
RNU6-1249P-201ENST00000363237 TMEM134Q9H6X4 195 aa5.94□□□□□ -1.46
RNU6-1249P-201ENST00000363237 NBPF26B4DH59 902 aa5.93□□□□□ -1.46
RNU6-1249P-201ENST00000363237 GPR37L1O60883 481 aa5.93□□□□□ -1.46
RNU6-1249P-201ENST00000363237 ERCC3P19447 782 aa5.93□□□□□ -1.46
RNU6-1249P-201ENST00000363237 SEMA3FQ13275 785 aa5.93□□□□□ -1.46
RNU6-1249P-201ENST00000363237 NUDT18Q6ZVK8 323 aa5.93□□□□□ -1.46
RNU6-1249P-201ENST00000363237 RDH13Q8NBN7 331 aa5.93□□□□□ -1.46
RNU6-1249P-201ENST00000363237 PNMA1Q8ND90 353 aa5.93□□□□□ -1.46
RNU6-1249P-201ENST00000363237 CCER1Q8TC90 406 aaPredicted RBP5.93□□□□□ -1.46
RNU6-1249P-201ENST00000363237 UCN2Q96RP3 112 aa5.93□□□□□ -1.46
RNU6-1249P-201ENST00000363237 HMX1Q9NP08 348 aaPredicted RBP5.93□□□□□ -1.46
RNU6-1249P-201ENST00000363237 FAM198AQ9UFP1 575 aa5.93□□□□□ -1.46
RNU6-1249P-201ENST00000363237 HOXA2O43364 376 aa5.92□□□□□ -1.46
RNU6-1249P-201ENST00000363237 MTMR2Q13614 643 aa5.92□□□□□ -1.46
RNU6-1249P-201ENST00000363237 ELOAQ14241 798 aaKnown RBP5.92□□□□□ -1.46
RNU6-1249P-201ENST00000363237 PRR7Q8TB68 274 aa5.92□□□□□ -1.46
RNU6-1249P-201ENST00000363237 MAFBQ9Y5Q3 323 aaPredicted RBP5.92□□□□□ -1.46
RNU6-1249P-201ENST00000363237 RBM47A0AV96 593 aaKnown RBP5.91□□□□□ -1.46
RNU6-1249P-201ENST00000363237 HMGB1P09429 215 aaKnown RBP5.91□□□□□ -1.46
RNU6-1249P-201ENST00000363237 GCGRP47871 477 aa5.91□□□□□ -1.46
RNU6-1249P-201ENST00000363237 CDCA8Q53HL2 280 aa5.91□□□□□ -1.46
RNU6-1249P-201ENST00000363237 TATDN2Q93075 761 aa5.91□□□□□ -1.46
RNU6-1249P-201ENST00000363237 KRTAP3-3Q9BYR6 98 aa5.91□□□□□ -1.46
RNU6-1249P-201ENST00000363237 KRTAP3-2Q9BYR7 98 aa5.91□□□□□ -1.46
RNU6-1249P-201ENST00000363237 TSKSQ9UJT2 592 aa5.91□□□□□ -1.46
RNU6-1249P-201ENST00000363237 ATP9BO43861 1147 aa5.9□□□□□ -1.46
RNU6-1249P-201ENST00000363237 EIF4G2P78344 907 aaKnown RBP eCLIP5.9□□□□□ -1.46
RNU6-1249P-201ENST00000363237 PACS2Q86VP3 889 aa5.9□□□□□ -1.46
RNU6-1249P-201ENST00000363237 LRRN4Q8WUT4 740 aa5.9□□□□□ -1.46
RNU6-1249P-201ENST00000363237 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.9□□□□□ -1.46
RNU6-1249P-201ENST00000363237 PNMA3Q9UL41 463 aa5.9□□□□□ -1.46
RNU6-1249P-201ENST00000363237 PPP1R3GB7ZBB8 358 aa5.89□□□□□ -1.47
RNU6-1249P-201ENST00000363237 TBC1D9Q6ZT07 1266 aa5.89□□□□□ -1.47
RNU6-1249P-201ENST00000363237 TSC1Q92574 1164 aa5.89□□□□□ -1.47
RNU6-1249P-201ENST00000363237 USP35Q9P2H5 1018 aa5.89□□□□□ -1.47
RNU6-1249P-201ENST00000363237 PCDHGC3Q9UN70 934 aa5.89□□□□□ -1.47
RNU6-1249P-201ENST00000363237 COL9A1P20849 921 aa5.88□□□□□ -1.47
RNU6-1249P-201ENST00000363237 GRIPAP1Q4V328 841 aa5.88□□□□□ -1.47
RNU6-1249P-201ENST00000363237 TXNDC2Q86VQ3 553 aa5.88□□□□□ -1.47
RNU6-1249P-201ENST00000363237 SLF2Q8IX21 1173 aa5.88□□□□□ -1.47
RNU6-1249P-201ENST00000363237 PSDA5PKW4 1024 aaPredicted RBP5.87□□□□□ -1.47
RNU6-1249P-201ENST00000363237 UNCXA6NJT0 531 aa5.87□□□□□ -1.47
RNU6-1249P-201ENST00000363237 TRIM6-TRIM34B2RNG4 842 aa5.87□□□□□ -1.47
RNU6-1249P-201ENST00000363237 NUDT7P0C024 238 aa5.87□□□□□ -1.47
RNU6-1249P-201ENST00000363237 ARID4AP29374 1257 aaPredicted RBP5.87□□□□□ -1.47
RNU6-1249P-201ENST00000363237 PPP4R3BQ5MIZ7 849 aa5.87□□□□□ -1.47
RNU6-1249P-201ENST00000363237 KANK4Q5T7N3 995 aaPredicted RBP5.87□□□□□ -1.47
RNU6-1249P-201ENST00000363237 BCL2L12Q9HB09 334 aa5.87□□□□□ -1.47
RNU6-1249P-201ENST00000363237 IGSF5Q9NSI5 407 aa5.87□□□□□ -1.47
RNU6-1249P-201ENST00000363237 CFAP99D6REC4 459 aa5.86□□□□□ -1.47
RNU6-1249P-201ENST00000363237 PTPREP23469 700 aa5.86□□□□□ -1.47
RNU6-1249P-201ENST00000363237 NFATC2IPQ8NCF5 419 aa5.86□□□□□ -1.47
RNU6-1249P-201ENST00000363237 EPS8L1Q8TE68 723 aa5.86□□□□□ -1.47
RNU6-1249P-201ENST00000363237 C3orf80F5H4A9 247 aa5.85□□□□□ -1.47
RNU6-1249P-201ENST00000363237 C6orf229H3BNL8 230 aa5.85□□□□□ -1.47
RNU6-1249P-201ENST00000363237 TMEM164Q5U3C3 297 aa5.85□□□□□ -1.47
RNU6-1249P-201ENST00000363237 MARVELD3Q96A59 401 aa5.85□□□□□ -1.47
RNU6-1249P-201ENST00000363237 SIRT1Q96EB6 747 aa5.85□□□□□ -1.47
RNU6-1249P-201ENST00000363237 ZSWIM6Q9HCJ5 1215 aa5.85□□□□□ -1.47
RNU6-1249P-201ENST00000363237 RIMBP2O15034 1052 aa5.84□□□□□ -1.47
RNU6-1249P-201ENST00000363237 GUCA2AQ02747 115 aa5.84□□□□□ -1.47
RNU6-1249P-201ENST00000363237 NR1H3Q13133 447 aa5.84□□□□□ -1.47
RNU6-1249P-201ENST00000363237 NR6A1Q15406 480 aa5.84□□□□□ -1.47
RNU6-1249P-201ENST00000363237 DOK7Q18PE1 504 aa5.84□□□□□ -1.47
RNU6-1249P-201ENST00000363237 ZMIZ1Q9ULJ6 1067 aa5.84□□□□□ -1.47
RNU6-1249P-201ENST00000363237 NOVA2Q9UNW9 492 aaKnown RBP5.84□□□□□ -1.47
RNU6-1249P-201ENST00000363237 HSP90B1P14625 803 aaKnown RBP5.83□□□□□ -1.48
RNU6-1249P-201ENST00000363237 SSFA2P28290 1259 aa5.83□□□□□ -1.48
RNU6-1249P-201ENST00000363237 ARSIQ5FYB1 569 aa5.83□□□□□ -1.48
RNU6-1249P-201ENST00000363237 DNAJC14Q6Y2X3 702 aaPredicted RBP5.83□□□□□ -1.48
RNU6-1249P-201ENST00000363237 MRRFQ96E11 262 aaKnown RBP5.83□□□□□ -1.48
RNU6-1249P-201ENST00000363237 FAM196BA6NMK8 535 aa5.82□□□□□ -1.48
RNU6-1249P-201ENST00000363237 SLC10A3P09131 477 aa5.82□□□□□ -1.48
RNU6-1249P-201ENST00000363237 SLC4A3P48751 1232 aa5.82□□□□□ -1.48
RNU6-1249P-201ENST00000363237 HDGFP51858 240 aaKnown RBP5.82□□□□□ -1.48
RNU6-1249P-201ENST00000363237 PHLDB3Q6NSJ2 640 aa5.82□□□□□ -1.48
RNU6-1249P-201ENST00000363237 PLEKHM2Q8IWE5 1019 aa5.82□□□□□ -1.48
RNU6-1249P-201ENST00000363237 STK32AQ8WU08 396 aa5.82□□□□□ -1.48
RNU6-1249P-201ENST00000363237 KHSRPQ92945 711 aaKnown RBP eCLIP5.82□□□□□ -1.48
RNU6-1249P-201ENST00000363237 HLA-CQ95604 372 aa5.82□□□□□ -1.48
RNU6-1249P-201ENST00000363237 USP17L3A6NCW0 530 aa5.81□□□□□ -1.48
RNU6-1249P-201ENST00000363237 USP17L4A6NCW7 530 aa5.81□□□□□ -1.48
RNU6-1249P-201ENST00000363237 SMAPO00193 183 aa5.81□□□□□ -1.48
RNU6-1249P-201ENST00000363237 DESI1Q6ICB0 168 aa5.81□□□□□ -1.48
RNU6-1249P-201ENST00000363237 USP17L2Q6R6M4 530 aa5.81□□□□□ -1.48
RNU6-1249P-201ENST00000363237 USP17L1Q7RTZ2 530 aa5.81□□□□□ -1.48
RNU6-1249P-201ENST00000363237 PUS7Q96PZ0 661 aaKnown RBP5.81□□□□□ -1.48
RNU6-1249P-201ENST00000363237 LHX6Q9UPM6 363 aa5.81□□□□□ -1.48
RNU6-1249P-201ENST00000363237 SOWAHDA6NJG2 315 aa5.8□□□□□ -1.48
RNU6-1249P-201ENST00000363237 ZBBXA8MT70 800 aa5.8□□□□□ -1.48
RNU6-1249P-201ENST00000363237 SKIP12755 728 aa5.8□□□□□ -1.48
RNU6-1249P-201ENST00000363237 ZNF16P17020 682 aaPredicted RBP5.8□□□□□ -1.48
RNU6-1249P-201ENST00000363237 GPR153Q6NV75 609 aa5.8□□□□□ -1.48
RNU6-1249P-201ENST00000363237 CLP1Q92989 425 aaKnown RBP5.8□□□□□ -1.48
RNU6-1249P-201ENST00000363237 RNF166Q96A37 237 aaPredicted RBP5.8□□□□□ -1.48
RNU6-1249P-201ENST00000363237 CDCA7Q9BWT1 371 aaPredicted RBP5.8□□□□□ -1.48
RNU6-1249P-201ENST00000363237 BCL2L13Q9BXK5 485 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms