RNA–Protein interactions for RNA: ENST00000362552.1

VTRNA3-1P-201, Transcript of vault RNA 3-1, pseudogene, humanhuman

BASIC

Gene VTRNA3-1P, Length 102 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTRNA3-1P-201ENST00000362552 WASLO00401 505 aaPredicted RBP9.21□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 TOM1O60784 492 aa9.21□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 POLR3GLQ9BT43 218 aa9.21□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 CDK19Q9BWU1 502 aa9.21□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 DLC1Q96QB1 1528 aa9.21□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 PLEKHH1Q9ULM0 1364 aa9.2□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 ASXL1Q8IXJ9 1541 aa9.19□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 CHD2O14647 1828 aaKnown RBP9.19□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 NUTM2FA1L443 756 aa9.18□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 UBAP1LF5GYI3 381 aa9.18□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 TMC1Q8TDI8 760 aa9.18□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 LRRC7Q96NW7 1537 aa9.18□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 PUS7Q96PZ0 661 aaKnown RBP9.18□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 CABP2Q9NPB3 220 aa9.18□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 SLAIN2Q9P270 581 aa9.18□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 SETD1AO15047 1707 aaKnown RBP9.17□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 NWD1Q149M9 1564 aa9.17□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 SCAF1Q9H7N4 1312 aaKnown RBP9.17□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 ESCO1Q5FWF5 840 aa9.17□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 NUDT16Q96DE0 195 aaKnown RBP9.17□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 TESK2Q96S53 571 aa9.17□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 CCDC61Q9Y6R9 512 aa9.17□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 ADGRL3Q9HAR2 1447 aa9.16□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 SBNO2Q9Y2G9 1366 aa9.15□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 XRN1Q8IZH2 1706 aaKnown RBP9.15□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 ZNF316A6NFI3 1004 aaPredicted RBP9.15□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 PIP4K2BP78356 416 aa9.15□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 NGDNQ8NEJ9 315 aaKnown RBP9.15□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 LTBP4Q8N2S1 1624 aa9.15□□□□□ -0.94
VTRNA3-1P-201ENST00000362552 KNDC1Q76NI1 1749 aa9.14□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 ATAD2Q6PL18 1390 aa9.14□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 PSME1Q06323 249 aa9.14□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 HDGFL2Q7Z4V5 671 aaPredicted RBP9.14□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 ZNF692Q9BU19 519 aaPredicted RBP9.14□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 PHF8Q9UPP1 1060 aa9.14□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 DCCP43146 1447 aa9.14□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 PMFBP1Q8TBY8 1022 aa9.13□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 TERF2IPQ9NYB0 399 aa9.13□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 CABP1Q9NZU7 370 aa9.13□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 IQSEC2Q5JU85 1478 aa9.13□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 PLEKHG3A1L390 1219 aa9.12□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 ORAI2Q96SN7 254 aa9.12□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 STRCP1A6NGW2 1772 aa9.12□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 ARHGEF28Q8N1W1 1705 aaKnown RBP9.11□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 SLC12A5Q9H2X9 1139 aa9.11□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 ANKARQ7Z5J8 1434 aa9.11□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 C1orf167Q5SNV9 1468 aa9.1□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 C11orf95C9JLR9 678 aaPredicted RBP9.1□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 FOXO3O43524 673 aa9.1□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.1□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 DISP3Q9P2K9 1392 aa9.1□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 NINLQ9Y2I6 1382 aa9.1□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 QRICH2Q9H0J4 1663 aa9.1□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 ACEP12821 1306 aa9.09□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 KIF7Q2M1P5 1343 aa9.09□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 NPHP3Q7Z494 1330 aa9.09□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 PRR36Q9H6K5 1346 aa9.09□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 PPIP5K1Q6PFW1 1433 aa9.09□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 PAK3O75914 559 aaPredicted RBP9.09□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 BRINP3Q76B58 766 aa9.09□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 KRT28Q7Z3Y7 464 aa9.09□□□□□ -0.95
VTRNA3-1P-201ENST00000362552 CDC42BPGQ6DT37 1551 aa9.08□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 MST1RQ04912 1400 aa9.08□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 LMOD2Q6P5Q4 547 aa9.08□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 PANK3Q9H999 370 aa9.08□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 TULP4Q9NRJ4 1543 aa9.08□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 CCDC7Q96M83 1385 aa9.08□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 WASHC2AQ641Q2 1341 aa9.07□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 DDX10Q13206 875 aaKnown RBP9.07□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 FBXO41Q8TF61 875 aa9.07□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 LRRC59Q96AG4 307 aaKnown RBP9.07□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 KNSTRNQ9Y448 316 aa9.07□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 ADGRB2O60241 1585 aa9.07□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 KTN1Q86UP2 1357 aaKnown RBP9.06□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 NALCNQ8IZF0 1738 aa9.05□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 XPCQ01831 940 aaPredicted RBP9.05□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.05□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 ATP7BP35670 1465 aa9.04□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 BRD4O60885 1362 aaPredicted RBP9.04□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 ANKRD36BQ8N2N9 1353 aa9.04□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 ABTB2Q8N961 1025 aa9.04□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 DDX17Q92841 729 aaKnown RBP9.04□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 TTC21AQ8NDW8 1320 aa9.04□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 FMN2Q9NZ56 1722 aa9.03□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 POLR3AO14802 1390 aaPredicted RBP9.03□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 HAP1P54257 671 aaPredicted RBP9.03□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 NLRP13Q86W25 1043 aa9.03□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 XIRP1Q702N8 1843 aaKnown RBP9.03□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 SOS2Q07890 1332 aaPredicted RBP9.03□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 CGNL1Q0VF96 1302 aa9.03□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 TTC21BQ7Z4L5 1316 aa9.03□□□□□ -0.96
VTRNA3-1P-201ENST00000362552 PLEKHG5O94827 1062 aa9.02□□□□□ -0.97
VTRNA3-1P-201ENST00000362552 NLRP6P59044 892 aa9.02□□□□□ -0.97
VTRNA3-1P-201ENST00000362552 COG3Q96JB2 828 aa9.02□□□□□ -0.97
VTRNA3-1P-201ENST00000362552 A0A1W2PP64 1363 aa9.01□□□□□ -0.97
VTRNA3-1P-201ENST00000362552 SBNO1A3KN83 1393 aa9.01□□□□□ -0.97
VTRNA3-1P-201ENST00000362552 HSPA1LP34931 641 aa9.01□□□□□ -0.97
VTRNA3-1P-201ENST00000362552 CNGB1Q14028 1251 aaPredicted RBP9.01□□□□□ -0.97
VTRNA3-1P-201ENST00000362552 CARD14Q9BXL6 1004 aa9.01□□□□□ -0.97
VTRNA3-1P-201ENST00000362552 SPATA31A3Q5VYP0 1347 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms