RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 TPM2P07951 284 aa12.92□□□□□ -0.34
CACNA1S-201ENST00000362061 SCAPERQ9BY12 1400 aa12.92□□□□□ -0.34
CACNA1S-201ENST00000362061 RNF20Q5VTR2 975 aa12.92□□□□□ -0.34
CACNA1S-201ENST00000362061 TSR1Q2NL82 804 aaKnown RBP12.91□□□□□ -0.34
CACNA1S-201ENST00000362061 DZIP1LQ8IYY4 767 aaKnown RBP12.91□□□□□ -0.34
CACNA1S-201ENST00000362061 CABP4P57796 275 aa12.91□□□□□ -0.34
CACNA1S-201ENST00000362061 CCDC47Q96A33 483 aaKnown RBP12.91□□□□□ -0.34
CACNA1S-201ENST00000362061 RTN4Q9NQC3 1192 aaKnown RBP12.91□□□□□ -0.34
CACNA1S-201ENST00000362061 PRKRIP1Q9H875 184 aaPredicted RBP12.9□□□□□ -0.34
CACNA1S-201ENST00000362061 MTMR7Q9Y216 660 aa12.9□□□□□ -0.34
CACNA1S-201ENST00000362061 ERC2O15083 957 aa12.9□□□□□ -0.34
CACNA1S-201ENST00000362061 UBTFL1P0CB47 393 aaPredicted RBP12.9□□□□□ -0.34
CACNA1S-201ENST00000362061 ATP6V1DQ9Y5K8 247 aa12.9□□□□□ -0.34
CACNA1S-201ENST00000362061 FOXD4L6Q3SYB3 417 aaPredicted RBP12.89□□□□□ -0.35
CACNA1S-201ENST00000362061 FOXD4L3Q6VB84 417 aaPredicted RBP12.89□□□□□ -0.35
CACNA1S-201ENST00000362061 SLC52A1Q9NWF4 448 aa12.89□□□□□ -0.35
CACNA1S-201ENST00000362061 REC8O95072 547 aa12.89□□□□□ -0.35
CACNA1S-201ENST00000362061 IFT140Q96RY7 1462 aa12.89□□□□□ -0.35
CACNA1S-201ENST00000362061 RALYLQ86SE5 291 aaKnown RBP12.89□□□□□ -0.35
CACNA1S-201ENST00000362061 FGD6Q6ZV73 1430 aa12.89□□□□□ -0.35
CACNA1S-201ENST00000362061 RRBP1Q9P2E9 1410 aaKnown RBP12.89□□□□□ -0.35
CACNA1S-201ENST00000362061 FYCO1Q9BQS8 1478 aa12.89□□□□□ -0.35
CACNA1S-201ENST00000362061 PHF14O94880 888 aa12.88□□□□□ -0.35
CACNA1S-201ENST00000362061 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
CACNA1S-201ENST00000362061 XPCQ01831 940 aaPredicted RBP12.88□□□□□ -0.35
CACNA1S-201ENST00000362061 SPG7Q9UQ90 795 aa12.88□□□□□ -0.35
CACNA1S-201ENST00000362061 CUX1P39880 1505 aa12.88□□□□□ -0.35
CACNA1S-201ENST00000362061 TBC1D2BQ9UPU7 963 aa12.88□□□□□ -0.35
CACNA1S-201ENST00000362061 CENPQQ7L2Z9 268 aaPredicted RBP12.88□□□□□ -0.35
CACNA1S-201ENST00000362061 CCDC30Q5VVM6 783 aa12.87□□□□□ -0.35
CACNA1S-201ENST00000362061 MTHFSP49914 203 aa12.87□□□□□ -0.35
CACNA1S-201ENST00000362061 NESP48681 1621 aa12.87□□□□□ -0.35
CACNA1S-201ENST00000362061 CDK19Q9BWU1 502 aa12.87□□□□□ -0.35
CACNA1S-201ENST00000362061 R3HCC1Q9Y3T6 440 aaKnown RBP12.87□□□□□ -0.35
CACNA1S-201ENST00000362061 ZNF692Q9BU19 519 aaPredicted RBP12.87□□□□□ -0.35
CACNA1S-201ENST00000362061 PCMTD1Q96MG8 357 aaPredicted RBP12.86□□□□□ -0.35
CACNA1S-201ENST00000362061 CNNM1Q9NRU3 951 aa12.86□□□□□ -0.35
CACNA1S-201ENST00000362061 TPM1P09493 284 aa12.86□□□□□ -0.35
CACNA1S-201ENST00000362061 SAFBQ15424 915 aaKnown RBP eCLIP12.85□□□□□ -0.35
CACNA1S-201ENST00000362061 ZNF530Q6P9A1 599 aaPredicted RBP12.85□□□□□ -0.35
CACNA1S-201ENST00000362061 CRBNQ96SW2 442 aa12.85□□□□□ -0.35
CACNA1S-201ENST00000362061 BECN2A8MW95 431 aa12.85□□□□□ -0.35
CACNA1S-201ENST00000362061 CABP1Q9NZU7 370 aa12.85□□□□□ -0.35
CACNA1S-201ENST00000362061 GNL3LQ9NVN8 582 aaKnown RBP12.84□□□□□ -0.35
CACNA1S-201ENST00000362061 PRKAR2BP31323 418 aa12.84□□□□□ -0.35
CACNA1S-201ENST00000362061 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.84□□□□□ -0.35
CACNA1S-201ENST00000362061 GOLGA6L19H0YKK7 550 aa12.84□□□□□ -0.35
CACNA1S-201ENST00000362061 ZC3H6P61129 1189 aaKnown RBP12.84□□□□□ -0.35
CACNA1S-201ENST00000362061 HMGB2P26583 209 aaKnown RBP12.83□□□□□ -0.35
CACNA1S-201ENST00000362061 RBM5P52756 815 aaKnown RBP eCLIP12.83□□□□□ -0.36
CACNA1S-201ENST00000362061 RRP1P56182 461 aaKnown RBP12.83□□□□□ -0.36
CACNA1S-201ENST00000362061 RBM19Q9Y4C8 960 aaKnown RBP12.82□□□□□ -0.36
CACNA1S-201ENST00000362061 NCOA2Q15596 1464 aa12.82□□□□□ -0.36
CACNA1S-201ENST00000362061 PLEKHH2Q8IVE3 1493 aa12.82□□□□□ -0.36
CACNA1S-201ENST00000362061 SULT6B1Q6IMI4 303 aa12.82□□□□□ -0.36
CACNA1S-201ENST00000362061 SLC3A2P08195 630 aaKnown RBP12.82□□□□□ -0.36
CACNA1S-201ENST00000362061 CLASRPQ8N2M8 674 aaKnown RBP12.82□□□□□ -0.36
CACNA1S-201ENST00000362061 ANKRD20A12PQ8NF67 263 aa12.82□□□□□ -0.36
CACNA1S-201ENST00000362061 EXOC6Q8TAG9 804 aa12.82□□□□□ -0.36
CACNA1S-201ENST00000362061 DNAJC2Q99543 621 aaKnown RBP12.82□□□□□ -0.36
CACNA1S-201ENST00000362061 FSD1Q9BTV5 496 aa12.82□□□□□ -0.36
CACNA1S-201ENST00000362061 RTEL1-TNFRSF6BF6WH68 1400 aa12.82□□□□□ -0.36
CACNA1S-201ENST00000362061 ADAMTS2O95450 1211 aa12.81□□□□□ -0.36
CACNA1S-201ENST00000362061 FOSBP53539 338 aa12.81□□□□□ -0.36
CACNA1S-201ENST00000362061 SNAPC4Q5SXM2 1469 aa12.81□□□□□ -0.36
CACNA1S-201ENST00000362061 GNAI3P08754 354 aa12.81□□□□□ -0.36
CACNA1S-201ENST00000362061 BRMS1Q9HCU9 246 aa12.81□□□□□ -0.36
CACNA1S-201ENST00000362061 ATP2B2Q01814 1243 aa12.81□□□□□ -0.36
CACNA1S-201ENST00000362061 HOOK1Q9UJC3 728 aaKnown RBP12.81□□□□□ -0.36
CACNA1S-201ENST00000362061 SURF6O75683 361 aaKnown RBP12.81□□□□□ -0.36
CACNA1S-201ENST00000362061 SART3Q15020 963 aaKnown RBP12.81□□□□□ -0.36
CACNA1S-201ENST00000362061 BICDL1Q6ZP65 573 aa12.81□□□□□ -0.36
CACNA1S-201ENST00000362061 GOLGA6L3A6NEY3 463 aa12.81□□□□□ -0.36
CACNA1S-201ENST00000362061 TMEM132AQ24JP5 1023 aa12.81□□□□□ -0.36
CACNA1S-201ENST00000362061 CASKIN1Q8WXD9 1431 aa12.8□□□□□ -0.36
CACNA1S-201ENST00000362061 HDGFL1Q5TGJ6 251 aa12.8□□□□□ -0.36
CACNA1S-201ENST00000362061 MPHOSPH8Q99549 860 aa12.8□□□□□ -0.36
CACNA1S-201ENST00000362061 XBP1P17861 261 aa12.8□□□□□ -0.36
CACNA1S-201ENST00000362061 FAM161AQ3B820 660 aa12.8□□□□□ -0.36
CACNA1S-201ENST00000362061 PNISRQ8TF01 805 aaKnown RBP12.8□□□□□ -0.36
CACNA1S-201ENST00000362061 MYL6BP14649 208 aa12.79□□□□□ -0.36
CACNA1S-201ENST00000362061 INTS3Q68E01 1043 aaKnown RBP12.79□□□□□ -0.36
CACNA1S-201ENST00000362061 CCDC158Q5M9N0 1113 aa12.79□□□□□ -0.36
CACNA1S-201ENST00000362061 TTC39AQ5SRH9 613 aa12.79□□□□□ -0.36
CACNA1S-201ENST00000362061 NGLY1Q96IV0 654 aa12.79□□□□□ -0.36
CACNA1S-201ENST00000362061 LNPKQ9C0E8 428 aa12.79□□□□□ -0.36
CACNA1S-201ENST00000362061 SLC12A5Q9H2X9 1139 aa12.79□□□□□ -0.36
CACNA1S-201ENST00000362061 VPS37CA5D8V6 355 aaPredicted RBP12.79□□□□□ -0.36
CACNA1S-201ENST00000362061 IPO7O95373 1038 aaKnown RBP12.79□□□□□ -0.36
CACNA1S-201ENST00000362061 GOLGA6L1Q8N7Z2 621 aa12.79□□□□□ -0.36
CACNA1S-201ENST00000362061 BICD2Q8TD16 824 aa12.79□□□□□ -0.36
CACNA1S-201ENST00000362061 WWC2Q6AWC2 1192 aa12.78□□□□□ -0.36
CACNA1S-201ENST00000362061 TCP11L2Q8N4U5 519 aa12.78□□□□□ -0.36
CACNA1S-201ENST00000362061 ZNF428Q96B54 188 aa12.78□□□□□ -0.36
CACNA1S-201ENST00000362061 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
CACNA1S-201ENST00000362061 RRP12Q5JTH9 1297 aaKnown RBP12.78□□□□□ -0.36
CACNA1S-201ENST00000362061 KIF7Q2M1P5 1343 aa12.77□□□□□ -0.36
CACNA1S-201ENST00000362061 KDM4AO75164 1064 aa12.77□□□□□ -0.36
CACNA1S-201ENST00000362061 SMC3Q9UQE7 1217 aa12.77□□□□□ -0.36
CACNA1S-201ENST00000362061 DDX49Q9Y6V7 483 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms