RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ARHGEF28Q8N1W1 1705 aaKnown RBP19.55■□□□□ 0.72
NSMCE1-201ENST00000361439 PLEKHH1Q9ULM0 1364 aa19.55■□□□□ 0.72
NSMCE1-201ENST00000361439 XIRP1Q702N8 1843 aaKnown RBP19.54■□□□□ 0.72
NSMCE1-201ENST00000361439 RBM33Q96EV2 1170 aaKnown RBP19.53■□□□□ 0.72
NSMCE1-201ENST00000361439 ATF3P18847 181 aa19.52■□□□□ 0.72
NSMCE1-201ENST00000361439 SBNO2Q9Y2G9 1366 aa19.52■□□□□ 0.72
NSMCE1-201ENST00000361439 TOM1O60784 492 aa19.51■□□□□ 0.71
NSMCE1-201ENST00000361439 USP47Q96K76 1375 aa19.51■□□□□ 0.71
NSMCE1-201ENST00000361439 ADGRB2O60241 1585 aa19.5■□□□□ 0.71
NSMCE1-201ENST00000361439 CDC42BPGQ6DT37 1551 aa19.5■□□□□ 0.71
NSMCE1-201ENST00000361439 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.49■□□□□ 0.71
NSMCE1-201ENST00000361439 NALCNQ8IZF0 1738 aa19.48■□□□□ 0.71
NSMCE1-201ENST00000361439 SAFB2Q14151 953 aaKnown RBP eCLIP19.48■□□□□ 0.71
NSMCE1-201ENST00000361439 EIF4G2P78344 907 aaKnown RBP eCLIP19.47■□□□□ 0.71
NSMCE1-201ENST00000361439 ST20-MTHFSA0A0A6YYL1 179 aa19.46■□□□□ 0.71
NSMCE1-201ENST00000361439 WASLO00401 505 aaPredicted RBP19.46■□□□□ 0.71
NSMCE1-201ENST00000361439 MINK1Q8N4C8 1332 aaPredicted RBP19.46■□□□□ 0.71
NSMCE1-201ENST00000361439 SLAIN2Q9P270 581 aa19.45■□□□□ 0.7
NSMCE1-201ENST00000361439 UBAP1LF5GYI3 381 aa19.44■□□□□ 0.7
NSMCE1-201ENST00000361439 EVC2Q86UK5 1308 aa19.44■□□□□ 0.7
NSMCE1-201ENST00000361439 QRICH2Q9H0J4 1663 aa19.43■□□□□ 0.7
NSMCE1-201ENST00000361439 PUS7Q96PZ0 661 aaKnown RBP19.43■□□□□ 0.7
NSMCE1-201ENST00000361439 MST1RQ04912 1400 aa19.42■□□□□ 0.7
NSMCE1-201ENST00000361439 ANKARQ7Z5J8 1434 aa19.42■□□□□ 0.7
NSMCE1-201ENST00000361439 TESK2Q96S53 571 aa19.42■□□□□ 0.7
NSMCE1-201ENST00000361439 HIRIP3Q9BW71 556 aaPredicted RBP19.42■□□□□ 0.7
NSMCE1-201ENST00000361439 CDK19Q9BWU1 502 aa19.4■□□□□ 0.7
NSMCE1-201ENST00000361439 C1orf167Q5SNV9 1468 aa19.4■□□□□ 0.7
NSMCE1-201ENST00000361439 FBXO41Q8TF61 875 aa19.39■□□□□ 0.69
NSMCE1-201ENST00000361439 TULP4Q9NRJ4 1543 aa19.39■□□□□ 0.69
NSMCE1-201ENST00000361439 FMN2Q9NZ56 1722 aa19.39■□□□□ 0.69
NSMCE1-201ENST00000361439 HSPA5P11021 654 aaKnown RBP19.38■□□□□ 0.69
NSMCE1-201ENST00000361439 TMF1P82094 1093 aa19.38■□□□□ 0.69
NSMCE1-201ENST00000361439 CDCA8Q53HL2 280 aa19.38■□□□□ 0.69
NSMCE1-201ENST00000361439 SRPK2P78362 688 aaKnown RBP19.36■□□□□ 0.69
NSMCE1-201ENST00000361439 CCDC61Q9Y6R9 512 aa19.35■□□□□ 0.69
NSMCE1-201ENST00000361439 ATAD2Q6PL18 1390 aa19.34■□□□□ 0.69
NSMCE1-201ENST00000361439 BRINP3Q76B58 766 aa19.34■□□□□ 0.69
NSMCE1-201ENST00000361439 NUDT16Q96DE0 195 aaKnown RBP19.34■□□□□ 0.69
NSMCE1-201ENST00000361439 ESCO1Q5FWF5 840 aa19.33■□□□□ 0.68
NSMCE1-201ENST00000361439 ATP7BP35670 1465 aa19.33■□□□□ 0.68
NSMCE1-201ENST00000361439 PIP4K2BP78356 416 aa19.32■□□□□ 0.68
NSMCE1-201ENST00000361439 CABP2Q9NPB3 220 aa19.32■□□□□ 0.68
NSMCE1-201ENST00000361439 PRR36Q9H6K5 1346 aa19.31■□□□□ 0.68
NSMCE1-201ENST00000361439 PLEKHG3A1L390 1219 aa19.3■□□□□ 0.68
NSMCE1-201ENST00000361439 NUTM2FA1L443 756 aa19.3■□□□□ 0.68
NSMCE1-201ENST00000361439 ORAI2Q96SN7 254 aa19.3■□□□□ 0.68
NSMCE1-201ENST00000361439 PHF8Q9UPP1 1060 aa19.3■□□□□ 0.68
NSMCE1-201ENST00000361439 NINLQ9Y2I6 1382 aa19.3■□□□□ 0.68
NSMCE1-201ENST00000361439 ROBO1Q9Y6N7 1651 aa19.3■□□□□ 0.68
NSMCE1-201ENST00000361439 USP32Q8NFA0 1604 aa19.29■□□□□ 0.68
NSMCE1-201ENST00000361439 SCAF1Q9H7N4 1312 aaKnown RBP19.29■□□□□ 0.68
NSMCE1-201ENST00000361439 KIF1AQ12756 1690 aa19.29■□□□□ 0.68
NSMCE1-201ENST00000361439 DISP3Q9P2K9 1392 aa19.29■□□□□ 0.68
NSMCE1-201ENST00000361439 ITSN1Q15811 1721 aa19.28■□□□□ 0.68
NSMCE1-201ENST00000361439 NPHP3Q7Z494 1330 aa19.28■□□□□ 0.68
NSMCE1-201ENST00000361439 AHDC1Q5TGY3 1603 aaPredicted RBP19.26■□□□□ 0.67
NSMCE1-201ENST00000361439 POLR3AO14802 1390 aaPredicted RBP19.26■□□□□ 0.67
NSMCE1-201ENST00000361439 TOPAZ1Q8N9V7 1692 aa19.26■□□□□ 0.67
NSMCE1-201ENST00000361439 PPIP5K1Q6PFW1 1433 aa19.25■□□□□ 0.67
NSMCE1-201ENST00000361439 ZNF692Q9BU19 519 aaPredicted RBP19.24■□□□□ 0.67
NSMCE1-201ENST00000361439 CABP1Q9NZU7 370 aa19.24■□□□□ 0.67
NSMCE1-201ENST00000361439 BRD4O60885 1362 aaPredicted RBP19.23■□□□□ 0.67
NSMCE1-201ENST00000361439 FOXO3O43524 673 aa19.23■□□□□ 0.67
NSMCE1-201ENST00000361439 NGDNQ8NEJ9 315 aaKnown RBP19.23■□□□□ 0.67
NSMCE1-201ENST00000361439 SOS2Q07890 1332 aaPredicted RBP19.23■□□□□ 0.67
NSMCE1-201ENST00000361439 NHSL1Q5SYE7 1610 aa19.22■□□□□ 0.67
NSMCE1-201ENST00000361439 RGPD8O14715 1765 aaPredicted RBP19.22■□□□□ 0.67
NSMCE1-201ENST00000361439 PSME1Q06323 249 aa19.22■□□□□ 0.67
NSMCE1-201ENST00000361439 PMFBP1Q8TBY8 1022 aa19.22■□□□□ 0.67
NSMCE1-201ENST00000361439 ACEP12821 1306 aa19.21■□□□□ 0.67
NSMCE1-201ENST00000361439 TERF2IPQ9NYB0 399 aa19.2■□□□□ 0.66
NSMCE1-201ENST00000361439 CPSF1Q10570 1443 aaKnown RBP19.19■□□□□ 0.66
NSMCE1-201ENST00000361439 TMC1Q8TDI8 760 aa19.19■□□□□ 0.66
NSMCE1-201ENST00000361439 LRRC59Q96AG4 307 aaKnown RBP19.19■□□□□ 0.66
NSMCE1-201ENST00000361439 PXDNQ92626 1479 aa19.18■□□□□ 0.66
NSMCE1-201ENST00000361439 KRT28Q7Z3Y7 464 aa19.18■□□□□ 0.66
NSMCE1-201ENST00000361439 SBNO1A3KN83 1393 aa19.18■□□□□ 0.66
NSMCE1-201ENST00000361439 C11orf95C9JLR9 678 aaPredicted RBP19.17■□□□□ 0.66
NSMCE1-201ENST00000361439 HSPA1LP34931 641 aa19.17■□□□□ 0.66
NSMCE1-201ENST00000361439 HDGFL2Q7Z4V5 671 aaPredicted RBP19.17■□□□□ 0.66
NSMCE1-201ENST00000361439 SLC12A5Q9H2X9 1139 aa19.17■□□□□ 0.66
NSMCE1-201ENST00000361439 KIF7Q2M1P5 1343 aa19.17■□□□□ 0.66
NSMCE1-201ENST00000361439 PHLPP1O60346 1717 aa19.16■□□□□ 0.66
NSMCE1-201ENST00000361439 ANKRD36BQ8N2N9 1353 aa19.16■□□□□ 0.66
NSMCE1-201ENST00000361439 COL16A1Q07092 1604 aaPredicted RBP19.15■□□□□ 0.66
NSMCE1-201ENST00000361439 DDX17Q92841 729 aaKnown RBP19.15■□□□□ 0.66
NSMCE1-201ENST00000361439 CCDC7Q96M83 1385 aa19.14■□□□□ 0.65
NSMCE1-201ENST00000361439 USP6P35125 1406 aa19.14■□□□□ 0.65
NSMCE1-201ENST00000361439 CD163L1Q9NR16 1453 aa19.14■□□□□ 0.65
NSMCE1-201ENST00000361439 SPATA31A3Q5VYP0 1347 aa19.13■□□□□ 0.65
NSMCE1-201ENST00000361439 KTN1Q86UP2 1357 aaKnown RBP19.13■□□□□ 0.65
NSMCE1-201ENST00000361439 TNS3Q68CZ2 1445 aa19.12■□□□□ 0.65
NSMCE1-201ENST00000361439 SSH2Q76I76 1423 aa19.12■□□□□ 0.65
NSMCE1-201ENST00000361439 A0A1W2PP64 1363 aa19.12■□□□□ 0.65
NSMCE1-201ENST00000361439 ARHGEF10O15013 1369 aa19.12■□□□□ 0.65
NSMCE1-201ENST00000361439 JCADQ9P266 1359 aa19.12■□□□□ 0.65
NSMCE1-201ENST00000361439 WASHC2AQ641Q2 1341 aa19.12■□□□□ 0.65
NSMCE1-201ENST00000361439 EDC4Q6P2E9 1401 aaKnown RBP19.11■□□□□ 0.65
NSMCE1-201ENST00000361439 TTC21AQ8NDW8 1320 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms