RNA–Protein interactions for RNA: ENST00000361204.8

SREBF2-201, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SREBF2, Length 5,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-201ENST00000361204 EXOSC9Q06265 439 aaKnown RBP21.66■■□□□ 1.06
SREBF2-201ENST00000361204 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.66■■□□□ 1.06
SREBF2-201ENST00000361204 NUTM2FA1L443 756 aa21.65■■□□□ 1.06
SREBF2-201ENST00000361204 MNS1Q8NEH6 495 aa21.65■■□□□ 1.06
SREBF2-201ENST00000361204 GCC1Q96CN9 775 aa21.65■■□□□ 1.06
SREBF2-201ENST00000361204 K7ELQ4 463 aaPredicted RBP21.65■■□□□ 1.06
SREBF2-201ENST00000361204 CCDC73Q6ZRK6 1079 aa21.65■■□□□ 1.06
SREBF2-201ENST00000361204 NBPF1Q3BBV0 1214 aa21.64■■□□□ 1.06
SREBF2-201ENST00000361204 CFTRP13569 1480 aa21.64■■□□□ 1.06
SREBF2-201ENST00000361204 CPLX2Q6PUV4 134 aaKnown RBP21.64■■□□□ 1.05
SREBF2-201ENST00000361204 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.64■■□□□ 1.05
SREBF2-201ENST00000361204 C9orf78Q9NZ63 289 aaPredicted RBP21.63■■□□□ 1.05
SREBF2-201ENST00000361204 CWC22Q9HCG8 908 aaKnown RBP21.63■■□□□ 1.05
SREBF2-201ENST00000361204 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.63■■□□□ 1.05
SREBF2-201ENST00000361204 CCDC70Q6NSX1 233 aa21.62■■□□□ 1.05
SREBF2-201ENST00000361204 GGNBP2Q9H3C7 697 aa21.62■■□□□ 1.05
SREBF2-201ENST00000361204 CCDC9Q9Y3X0 531 aaKnown RBP21.62■■□□□ 1.05
SREBF2-201ENST00000361204 CLSTN1O94985 981 aa21.61■■□□□ 1.05
SREBF2-201ENST00000361204 TRIM5Q9C035 493 aa21.61■■□□□ 1.05
SREBF2-201ENST00000361204 HMOX1P09601 288 aa21.61■■□□□ 1.05
SREBF2-201ENST00000361204 PRXQ9BXM0 1461 aa21.61■■□□□ 1.05
SREBF2-201ENST00000361204 CCDC66A2RUB6 948 aa21.6■■□□□ 1.05
SREBF2-201ENST00000361204 NECTIN2Q92692 538 aa21.6■■□□□ 1.05
SREBF2-201ENST00000361204 KIAA1107Q9UPP5 1409 aa21.6■■□□□ 1.05
SREBF2-201ENST00000361204 EIF2S2P20042 333 aaKnown RBP21.6■■□□□ 1.05
SREBF2-201ENST00000361204 HSP90AB4PQ58FF6 505 aa21.6■■□□□ 1.05
SREBF2-201ENST00000361204 SYNJ1O43426 1573 aa21.6■■□□□ 1.05
SREBF2-201ENST00000361204 UQCRHLA0A096LP55 91 aa21.6■■□□□ 1.05
SREBF2-201ENST00000361204 UQCRHP07919 91 aa21.6■■□□□ 1.05
SREBF2-201ENST00000361204 MVPQ14764 893 aaKnown RBP21.59■■□□□ 1.05
SREBF2-201ENST00000361204 ZSCAN30Q86W11 494 aa21.59■■□□□ 1.05
SREBF2-201ENST00000361204 CPLX1O14810 134 aa21.59■■□□□ 1.05
SREBF2-201ENST00000361204 ERC2O15083 957 aa21.59■■□□□ 1.05
SREBF2-201ENST00000361204 TEFQ10587 303 aa21.59■■□□□ 1.05
SREBF2-201ENST00000361204 BCL11BQ9C0K0 894 aaPredicted RBP21.59■■□□□ 1.05
SREBF2-201ENST00000361204 GAPVD1Q14C86 1478 aa21.58■■□□□ 1.04
SREBF2-201ENST00000361204 TIAM1Q13009 1591 aa21.58■■□□□ 1.04
SREBF2-201ENST00000361204 SKAP1Q86WV1 359 aa21.58■■□□□ 1.04
SREBF2-201ENST00000361204 FBXW7Q969H0 707 aa21.58■■□□□ 1.04
SREBF2-201ENST00000361204 NOB1Q9ULX3 412 aaKnown RBP21.57■■□□□ 1.04
SREBF2-201ENST00000361204 PTPRGP23470 1445 aa21.57■■□□□ 1.04
SREBF2-201ENST00000361204 CCDC27Q2M243 656 aa21.57■■□□□ 1.04
SREBF2-201ENST00000361204 IPO7O95373 1038 aaKnown RBP21.56■■□□□ 1.04
SREBF2-201ENST00000361204 TSR2Q969E8 191 aaKnown RBP21.56■■□□□ 1.04
SREBF2-201ENST00000361204 RAD54L2Q9Y4B4 1467 aa21.56■■□□□ 1.04
SREBF2-201ENST00000361204 LRRFIP1Q32MZ4 808 aaKnown RBP21.56■■□□□ 1.04
SREBF2-201ENST00000361204 WDR63Q8IWG1 891 aa21.56■■□□□ 1.04
SREBF2-201ENST00000361204 C1orf115Q9H7X2 142 aa21.56■■□□□ 1.04
SREBF2-201ENST00000361204 NEXNQ0ZGT2 675 aa21.56■■□□□ 1.04
SREBF2-201ENST00000361204 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.56■■□□□ 1.042e-7■■■■■ 99
SREBF2-201ENST00000361204 CT47B1P0C2W7 299 aaPredicted RBP21.56■■□□□ 1.04
SREBF2-201ENST00000361204 C11orf95C9JLR9 678 aaPredicted RBP21.55■■□□□ 1.04
SREBF2-201ENST00000361204 TRIM29Q14134 588 aa21.55■■□□□ 1.04
SREBF2-201ENST00000361204 SLFN5Q08AF3 891 aa21.55■■□□□ 1.04
SREBF2-201ENST00000361204 NAT10Q9H0A0 1025 aaKnown RBP21.55■■□□□ 1.04
SREBF2-201ENST00000361204 FIBPO43427 364 aa21.55■■□□□ 1.04
SREBF2-201ENST00000361204 G3BP1Q13283 466 aaKnown RBP eCLIP21.55■■□□□ 1.043e-9■□□□□ 8.8
SREBF2-201ENST00000361204 ATF7IPQ6VMQ6 1270 aa21.55■■□□□ 1.04
SREBF2-201ENST00000361204 TSPYL4Q9UJ04 414 aa21.55■■□□□ 1.04
SREBF2-201ENST00000361204 HOOK1Q9UJC3 728 aaKnown RBP21.54■■□□□ 1.04
SREBF2-201ENST00000361204 AKAP17AQ02040 695 aaKnown RBP21.54■■□□□ 1.04
SREBF2-201ENST00000361204 SYNE3Q6ZMZ3 975 aa21.54■■□□□ 1.04
SREBF2-201ENST00000361204 SDF4Q9BRK5 362 aa21.53■■□□□ 1.04
SREBF2-201ENST00000361204 NOM1Q5C9Z4 860 aaKnown RBP21.53■■□□□ 1.04
SREBF2-201ENST00000361204 C20orf194Q5TEA3 1177 aa21.53■■□□□ 1.04
SREBF2-201ENST00000361204 HSP90B2PQ58FF3 399 aa21.52■■□□□ 1.04
SREBF2-201ENST00000361204 CHD1LQ86WJ1 897 aa21.52■■□□□ 1.04
SREBF2-201ENST00000361204 ANKRD20A12PQ8NF67 263 aa21.52■■□□□ 1.04
SREBF2-201ENST00000361204 MPNDQ8N594 471 aa21.52■■□□□ 1.04
SREBF2-201ENST00000361204 SCAPERQ9BY12 1400 aa21.52■■□□□ 1.04
SREBF2-201ENST00000361204 PDCP20941 246 aa21.52■■□□□ 1.03
SREBF2-201ENST00000361204 SPC24Q8NBT2 197 aa21.52■■□□□ 1.03
SREBF2-201ENST00000361204 ACBD3Q9H3P7 528 aa21.52■■□□□ 1.03
SREBF2-201ENST00000361204 CFAP70Q5T0N1 1121 aa21.51■■□□□ 1.03
SREBF2-201ENST00000361204 UBTFL1P0CB47 393 aaPredicted RBP21.51■■□□□ 1.03
SREBF2-201ENST00000361204 NAIPQ13075 1403 aa21.5■■□□□ 1.03
SREBF2-201ENST00000361204 PSMA5P28066 241 aa21.5■■□□□ 1.03
SREBF2-201ENST00000361204 C1orf141Q5JVX7 400 aa21.5■■□□□ 1.03
SREBF2-201ENST00000361204 CNTROBQ8N137 903 aa21.5■■□□□ 1.03
SREBF2-201ENST00000361204 GNAI3P08754 354 aa21.5■■□□□ 1.03
SREBF2-201ENST00000361204 CABP2Q9NPB3 220 aa21.5■■□□□ 1.03
SREBF2-201ENST00000361204 WDR33Q9C0J8 1336 aaKnown RBP21.49■■□□□ 1.03
SREBF2-201ENST00000361204 FOSBP53539 338 aa21.49■■□□□ 1.03
SREBF2-201ENST00000361204 TWISTNBQ3B726 338 aaPredicted RBP21.49■■□□□ 1.03
SREBF2-201ENST00000361204 EID1Q9Y6B2 187 aa21.49■■□□□ 1.03
SREBF2-201ENST00000361204 CCDC192P0DO97 292 aa21.48■■□□□ 1.03
SREBF2-201ENST00000361204 PRKAR2BP31323 418 aa21.48■■□□□ 1.03
SREBF2-201ENST00000361204 CWC15Q9P013 229 aaKnown RBP21.48■■□□□ 1.03
SREBF2-201ENST00000361204 ERBINQ96RT1 1412 aa21.47■■□□□ 1.03
SREBF2-201ENST00000361204 TMEM132EQ6IEE7 984 aa21.47■■□□□ 1.03
SREBF2-201ENST00000361204 CCDC112Q8NEF3 446 aa21.47■■□□□ 1.03
SREBF2-201ENST00000361204 DDX58O95786 925 aaKnown RBP21.46■■□□□ 1.03
SREBF2-201ENST00000361204 TRDNQ13061 729 aa21.46■■□□□ 1.03
SREBF2-201ENST00000361204 KINO60870 393 aaKnown RBP21.46■■□□□ 1.03
SREBF2-201ENST00000361204 TBC1D2Q9BYX2 928 aa21.46■■□□□ 1.03
SREBF2-201ENST00000361204 EHBP1L1Q8N3D4 1523 aa21.46■■□□□ 1.03
SREBF2-201ENST00000361204 SURF6O75683 361 aaKnown RBP21.45■■□□□ 1.02
SREBF2-201ENST00000361204 WWC1Q8IX03 1113 aa21.45■■□□□ 1.02
SREBF2-201ENST00000361204 CLASRPQ8N2M8 674 aaKnown RBP21.45■■□□□ 1.02
SREBF2-201ENST00000361204 EFCAB5A4FU69 1503 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms