RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 PER1O15534 1290 aaPredicted RBP16.53■□□□□ 0.24
UBA3-202ENST00000361055 ADAMTS13Q76LX8 1427 aa16.53■□□□□ 0.24
UBA3-202ENST00000361055 EIF3AQ14152 1382 aaKnown RBP16.52■□□□□ 0.24
UBA3-202ENST00000361055 PARD3Q8TEW0 1356 aa16.52■□□□□ 0.24
UBA3-202ENST00000361055 DIP2AQ14689 1571 aa16.52■□□□□ 0.24
UBA3-202ENST00000361055 LMTK3Q96Q04 1460 aa16.52■□□□□ 0.23
UBA3-202ENST00000361055 MED14O60244 1454 aa16.51■□□□□ 0.23
UBA3-202ENST00000361055 INSRP06213 1382 aa16.51■□□□□ 0.23
UBA3-202ENST00000361055 YTHDC2Q9H6S0 1430 aaKnown RBP16.5■□□□□ 0.23
UBA3-202ENST00000361055 ARHGEF28Q8N1W1 1705 aaKnown RBP16.5■□□□□ 0.23
UBA3-202ENST00000361055 TRAK1Q9UPV9 953 aa16.49■□□□□ 0.23
UBA3-202ENST00000361055 TBX22Q9Y458 520 aa16.49■□□□□ 0.23
UBA3-202ENST00000361055 METP08581 1390 aa16.49■□□□□ 0.23
UBA3-202ENST00000361055 RRP1P56182 461 aaKnown RBP16.48■□□□□ 0.23
UBA3-202ENST00000361055 KNDC1Q76NI1 1749 aa16.47■□□□□ 0.23
UBA3-202ENST00000361055 SLC26A8Q96RN1 970 aa16.47■□□□□ 0.23
UBA3-202ENST00000361055 RCAN3Q9UKA8 241 aa16.47■□□□□ 0.23
UBA3-202ENST00000361055 NPHP4O75161 1426 aaPredicted RBP16.47■□□□□ 0.23
UBA3-202ENST00000361055 TESK2Q96S53 571 aa16.47■□□□□ 0.23
UBA3-202ENST00000361055 NOP58Q9Y2X3 529 aaKnown RBP16.47■□□□□ 0.23
UBA3-202ENST00000361055 HSPA2P54652 639 aa16.45■□□□□ 0.22
UBA3-202ENST00000361055 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
UBA3-202ENST00000361055 STK26Q9P289 416 aa16.45■□□□□ 0.22
UBA3-202ENST00000361055 NCKAP5LQ9HCH0 1330 aa16.45■□□□□ 0.22
UBA3-202ENST00000361055 ABCC11Q96J66 1382 aa16.45■□□□□ 0.22
UBA3-202ENST00000361055 DLC1Q96QB1 1528 aa16.45■□□□□ 0.22
UBA3-202ENST00000361055 QRICH2Q9H0J4 1663 aa16.45■□□□□ 0.22
UBA3-202ENST00000361055 CENPJQ9HC77 1338 aaPredicted RBP16.44■□□□□ 0.22
UBA3-202ENST00000361055 SLC24A1O60721 1099 aa16.44■□□□□ 0.22
UBA3-202ENST00000361055 TECPR2O15040 1411 aa16.43■□□□□ 0.22
UBA3-202ENST00000361055 PIK3R4Q99570 1358 aa16.43■□□□□ 0.22
UBA3-202ENST00000361055 SENP3-EIF4A1A0A087X0R7 540 aa16.43■□□□□ 0.22
UBA3-202ENST00000361055 SBNO2Q9Y2G9 1366 aa16.43■□□□□ 0.22
UBA3-202ENST00000361055 TMF1P82094 1093 aa16.43■□□□□ 0.22
UBA3-202ENST00000361055 CPS1P31327 1500 aa16.42■□□□□ 0.22
UBA3-202ENST00000361055 STRCQ7RTU9 1775 aa16.42■□□□□ 0.22
UBA3-202ENST00000361055 ANP32AP39687 249 aaKnown RBP16.42■□□□□ 0.22
UBA3-202ENST00000361055 IPO9Q96P70 1041 aaKnown RBP16.42■□□□□ 0.22
UBA3-202ENST00000361055 CHD2O14647 1828 aaKnown RBP16.42■□□□□ 0.22
UBA3-202ENST00000361055 TCERG1O14776 1098 aaKnown RBP16.41■□□□□ 0.22
UBA3-202ENST00000361055 EXOC6Q8TAG9 804 aa16.41■□□□□ 0.22
UBA3-202ENST00000361055 PANK3Q9H999 370 aa16.41■□□□□ 0.22
UBA3-202ENST00000361055 PTPRUQ92729 1446 aa16.41■□□□□ 0.22
UBA3-202ENST00000361055 SIRT1Q96EB6 747 aa16.4■□□□□ 0.22
UBA3-202ENST00000361055 PRAM1Q96QH2 718 aa16.4■□□□□ 0.22
UBA3-202ENST00000361055 FAM135BQ49AJ0 1406 aa16.4■□□□□ 0.22
UBA3-202ENST00000361055 XRN1Q8IZH2 1706 aaKnown RBP16.4■□□□□ 0.22
UBA3-202ENST00000361055 DISP3Q9P2K9 1392 aa16.39■□□□□ 0.21
UBA3-202ENST00000361055 POGKQ9P215 609 aa16.39■□□□□ 0.21
UBA3-202ENST00000361055 AMOTL2Q9Y2J4 779 aa16.39■□□□□ 0.21
UBA3-202ENST00000361055 BLMP54132 1417 aaPredicted RBP16.37■□□□□ 0.21
UBA3-202ENST00000361055 PAK3O75914 559 aaPredicted RBP16.37■□□□□ 0.21
UBA3-202ENST00000361055 CC2D1BQ5T0F9 858 aaKnown RBP16.37■□□□□ 0.21
UBA3-202ENST00000361055 PTCH1Q13635 1447 aa16.36■□□□□ 0.21
UBA3-202ENST00000361055 MS4A1P11836 297 aa16.36■□□□□ 0.21
UBA3-202ENST00000361055 CDCA8Q53HL2 280 aa16.36■□□□□ 0.21
UBA3-202ENST00000361055 SALL2Q9Y467 1007 aaPredicted RBP16.36■□□□□ 0.21
UBA3-202ENST00000361055 ROBO2Q9HCK4 1378 aa16.36■□□□□ 0.21
UBA3-202ENST00000361055 SAFB2Q14151 953 aaKnown RBP eCLIP16.36■□□□□ 0.21
UBA3-202ENST00000361055 WAPLQ7Z5K2 1190 aa16.36■□□□□ 0.21
UBA3-202ENST00000361055 ZBTB47Q9UFB7 747 aaPredicted RBP16.36■□□□□ 0.21
UBA3-202ENST00000361055 CDCA7LQ96GN5 454 aa16.35■□□□□ 0.21
UBA3-202ENST00000361055 PLEKHH1Q9ULM0 1364 aa16.35■□□□□ 0.21
UBA3-202ENST00000361055 NWD1Q149M9 1564 aa16.33■□□□□ 0.21
UBA3-202ENST00000361055 KCNA6P17658 529 aa16.33■□□□□ 0.2
UBA3-202ENST00000361055 EVC2Q86UK5 1308 aa16.32■□□□□ 0.2
UBA3-202ENST00000361055 TULP4Q9NRJ4 1543 aa16.32■□□□□ 0.2
UBA3-202ENST00000361055 MINK1Q8N4C8 1332 aaPredicted RBP16.31■□□□□ 0.2
UBA3-202ENST00000361055 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.31■□□□□ 0.2
UBA3-202ENST00000361055 PDE4AP27815 886 aa16.3■□□□□ 0.2
UBA3-202ENST00000361055 PUS7Q96PZ0 661 aaKnown RBP16.3■□□□□ 0.2
UBA3-202ENST00000361055 ADGRB2O60241 1585 aa16.29■□□□□ 0.2
UBA3-202ENST00000361055 BACH2Q9BYV9 841 aa16.29■□□□□ 0.2
UBA3-202ENST00000361055 KNSTRNQ9Y448 316 aa16.29■□□□□ 0.2
UBA3-202ENST00000361055 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
UBA3-202ENST00000361055 DEKP35659 375 aaKnown RBP16.28■□□□□ 0.2
UBA3-202ENST00000361055 ADAMTS8Q9UP79 889 aa16.28■□□□□ 0.2
UBA3-202ENST00000361055 NKTRP30414 1462 aaKnown RBP16.28■□□□□ 0.2
UBA3-202ENST00000361055 STRCP1A6NGW2 1772 aa16.27■□□□□ 0.2
UBA3-202ENST00000361055 MYOM1P52179 1685 aa16.27■□□□□ 0.2
UBA3-202ENST00000361055 PPP2R1AP30153 589 aa16.27■□□□□ 0.19
UBA3-202ENST00000361055 AMER1Q5JTC6 1135 aaPredicted RBP16.26■□□□□ 0.19
UBA3-202ENST00000361055 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
UBA3-202ENST00000361055 SRPK2P78362 688 aaKnown RBP16.26■□□□□ 0.19
UBA3-202ENST00000361055 CDK19Q9BWU1 502 aa16.26■□□□□ 0.19
UBA3-202ENST00000361055 WASLO00401 505 aaPredicted RBP16.25■□□□□ 0.19
UBA3-202ENST00000361055 PLIN1O60240 522 aa16.24■□□□□ 0.19
UBA3-202ENST00000361055 CRBNQ96SW2 442 aa16.24■□□□□ 0.19
UBA3-202ENST00000361055 CABP2Q9NPB3 220 aa16.24■□□□□ 0.19
UBA3-202ENST00000361055 NPC1L1Q9UHC9 1359 aa16.24■□□□□ 0.19
UBA3-202ENST00000361055 NALCNQ8IZF0 1738 aa16.24■□□□□ 0.19
UBA3-202ENST00000361055 NBR1Q14596 966 aa16.24■□□□□ 0.19
UBA3-202ENST00000361055 ATAD2Q6PL18 1390 aa16.24■□□□□ 0.19
UBA3-202ENST00000361055 WDR43Q15061 677 aaKnown RBP eCLIP16.23■□□□□ 0.19
UBA3-202ENST00000361055 ZNF521Q96K83 1311 aa16.22■□□□□ 0.19
UBA3-202ENST00000361055 PROSER2Q86WR7 435 aaPredicted RBP16.21■□□□□ 0.19
UBA3-202ENST00000361055 NINLQ9Y2I6 1382 aa16.21■□□□□ 0.19
UBA3-202ENST00000361055 DUSP27Q5VZP5 1158 aa16.21■□□□□ 0.19
UBA3-202ENST00000361055 ADGRL3Q9HAR2 1447 aa16.2■□□□□ 0.18
UBA3-202ENST00000361055 GOLGA2Q08379 1002 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms