RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 SPRYD3Q8NCJ5 442 aa13.91□□□□□ -0.18
RPE-202ENST00000359429 RUNDC1Q96C34 613 aa13.91□□□□□ -0.18
RPE-202ENST00000359429 RRAGDQ9NQL2 400 aaPredicted RBP13.91□□□□□ -0.18
RPE-202ENST00000359429 MORC1Q86VD1 984 aa13.9□□□□□ -0.18
RPE-202ENST00000359429 SLC12A5Q9H2X9 1139 aa13.9□□□□□ -0.18
RPE-202ENST00000359429 ARXQ96QS3 562 aa13.89□□□□□ -0.19
RPE-202ENST00000359429 NSD3Q9BZ95 1437 aa13.89□□□□□ -0.19
RPE-202ENST00000359429 ABCA6Q8N139 1617 aa13.88□□□□□ -0.19
RPE-202ENST00000359429 IQSEC2Q5JU85 1478 aa13.88□□□□□ -0.19
RPE-202ENST00000359429 KIF3BO15066 747 aa13.88□□□□□ -0.19
RPE-202ENST00000359429 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
RPE-202ENST00000359429 SHPRHQ149N8 1683 aa13.88□□□□□ -0.19
RPE-202ENST00000359429 ZFYVE16Q7Z3T8 1539 aa13.88□□□□□ -0.19
RPE-202ENST00000359429 UPF2Q9HAU5 1272 aaKnown RBP13.88□□□□□ -0.19
RPE-202ENST00000359429 RTEL1-TNFRSF6BF6WH68 1400 aa13.87□□□□□ -0.19
RPE-202ENST00000359429 MAP3K4Q9Y6R4 1608 aa13.87□□□□□ -0.19
RPE-202ENST00000359429 MTHFSP49914 203 aa13.87□□□□□ -0.19
RPE-202ENST00000359429 WDR63Q8IWG1 891 aa13.87□□□□□ -0.19
RPE-202ENST00000359429 KIAA1210Q9ULL0 1709 aa13.87□□□□□ -0.19
RPE-202ENST00000359429 TRAK1Q9UPV9 953 aa13.86□□□□□ -0.19
RPE-202ENST00000359429 SLC24A1O60721 1099 aa13.86□□□□□ -0.19
RPE-202ENST00000359429 RSPH6AQ9H0K4 717 aa13.86□□□□□ -0.19
RPE-202ENST00000359429 RWDD1Q9H446 243 aaPredicted RBP13.86□□□□□ -0.19
RPE-202ENST00000359429 MYOM2P54296 1465 aa13.85□□□□□ -0.19
RPE-202ENST00000359429 XRCC6P12956 609 aaKnown RBP eCLIP13.85□□□□□ -0.19
RPE-202ENST00000359429 HOXD11P31277 338 aaPredicted RBP13.85□□□□□ -0.19
RPE-202ENST00000359429 OSCARQ8IYS5 282 aa13.85□□□□□ -0.19
RPE-202ENST00000359429 TET3O43151 1660 aa13.85□□□□□ -0.19
RPE-202ENST00000359429 DEPDC5O75140 1603 aa13.85□□□□□ -0.19
RPE-202ENST00000359429 AAMPQ13685 434 aa13.85□□□□□ -0.19
RPE-202ENST00000359429 GZF1Q9H116 711 aaPredicted RBP13.85□□□□□ -0.19
RPE-202ENST00000359429 MVPQ14764 893 aaKnown RBP13.84□□□□□ -0.19
RPE-202ENST00000359429 ZMYM3Q14202 1370 aa13.84□□□□□ -0.19
RPE-202ENST00000359429 MCM4P33991 863 aa13.84□□□□□ -0.19
RPE-202ENST00000359429 L1TD1Q5T7N2 865 aaKnown RBP13.84□□□□□ -0.19
RPE-202ENST00000359429 PANK2Q9BZ23 570 aa13.84□□□□□ -0.19
RPE-202ENST00000359429 KANK1Q14678 1352 aa13.84□□□□□ -0.19
RPE-202ENST00000359429 SBNO2Q9Y2G9 1366 aa13.84□□□□□ -0.19
RPE-202ENST00000359429 VWDEQ8N2E2 1590 aa13.84□□□□□ -0.19
RPE-202ENST00000359429 MFAP1P55081 439 aaKnown RBP13.83□□□□□ -0.2
RPE-202ENST00000359429 CCDC27Q2M243 656 aa13.83□□□□□ -0.2
RPE-202ENST00000359429 TSR2Q969E8 191 aaKnown RBP13.83□□□□□ -0.2
RPE-202ENST00000359429 FSD2A1L4K1 749 aa13.82□□□□□ -0.2
RPE-202ENST00000359429 TMEM132EQ6IEE7 984 aa13.82□□□□□ -0.2
RPE-202ENST00000359429 UBE2Q2Q8WVN8 375 aa13.82□□□□□ -0.2
RPE-202ENST00000359429 C22orf23Q9BZE7 217 aa13.82□□□□□ -0.2
RPE-202ENST00000359429 ZCCHC11Q5TAX3 1644 aaKnown RBP13.82□□□□□ -0.2
RPE-202ENST00000359429 ZNF518AQ6AHZ1 1483 aa13.82□□□□□ -0.2
RPE-202ENST00000359429 NOS1P29475 1434 aa13.81□□□□□ -0.2
RPE-202ENST00000359429 ZKSCAN2Q63HK3 967 aa13.81□□□□□ -0.2
RPE-202ENST00000359429 DZIP1LQ8IYY4 767 aaKnown RBP13.81□□□□□ -0.2
RPE-202ENST00000359429 DCAF8L1A6NGE4 600 aa13.8□□□□□ -0.2
RPE-202ENST00000359429 U2AF1L5P0DN76 240 aaPredicted RBP13.8□□□□□ -0.2
RPE-202ENST00000359429 CHGAP10645 457 aaKnown RBP13.8□□□□□ -0.2
RPE-202ENST00000359429 U2AF1Q01081 240 aaKnown RBP eCLIP13.8□□□□□ -0.2
RPE-202ENST00000359429 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
RPE-202ENST00000359429 NEURL4Q96JN8 1562 aa13.8□□□□□ -0.2
RPE-202ENST00000359429 GOLGA6L3A6NEY3 463 aa13.8□□□□□ -0.2
RPE-202ENST00000359429 FTSJ3Q8IY81 847 aaKnown RBP13.8□□□□□ -0.2
RPE-202ENST00000359429 MYH16Q9H6N6 1097 aa13.8□□□□□ -0.2
RPE-202ENST00000359429 TRIM27P14373 513 aa13.79□□□□□ -0.2
RPE-202ENST00000359429 MYO3AQ8NEV4 1616 aa13.79□□□□□ -0.2
RPE-202ENST00000359429 MROH1Q8NDA8 1641 aa13.79□□□□□ -0.2
RPE-202ENST00000359429 MROH2AA6NES4 1674 aa13.79□□□□□ -0.2
RPE-202ENST00000359429 ATP7AQ04656 1500 aa13.79□□□□□ -0.2
RPE-202ENST00000359429 EXOSC9Q06265 439 aaKnown RBP13.78□□□□□ -0.2
RPE-202ENST00000359429 TRAK2O60296 914 aa13.78□□□□□ -0.2
RPE-202ENST00000359429 CFAP53Q96M91 514 aa13.78□□□□□ -0.2
RPE-202ENST00000359429 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
RPE-202ENST00000359429 CHMP5Q9NZZ3 219 aa13.78□□□□□ -0.2
RPE-202ENST00000359429 SSH1Q8WYL5 1049 aa13.78□□□□□ -0.2
RPE-202ENST00000359429 SMC4Q9NTJ3 1288 aa13.78□□□□□ -0.2
RPE-202ENST00000359429 C14orf93Q9H972 538 aaKnown RBP13.77□□□□□ -0.21
RPE-202ENST00000359429 UHRF1BP1LA0JNW5 1464 aa13.76□□□□□ -0.21
RPE-202ENST00000359429 IFT172Q9UG01 1749 aa13.76□□□□□ -0.21
RPE-202ENST00000359429 HDAC1Q13547 482 aaPredicted RBP13.76□□□□□ -0.21
RPE-202ENST00000359429 ITPRIPQ8IWB1 547 aa13.76□□□□□ -0.21
RPE-202ENST00000359429 INO80Q9ULG1 1556 aaPredicted RBP13.76□□□□□ -0.21
RPE-202ENST00000359429 TRIM35Q9UPQ4 493 aa13.76□□□□□ -0.21
RPE-202ENST00000359429 CD109Q6YHK3 1445 aa13.75□□□□□ -0.21
RPE-202ENST00000359429 SMC5Q8IY18 1101 aa13.75□□□□□ -0.21
RPE-202ENST00000359429 PLEKHF1Q96S99 279 aa13.75□□□□□ -0.21
RPE-202ENST00000359429 RNF216Q9NWF9 866 aaPredicted RBP13.75□□□□□ -0.21
RPE-202ENST00000359429 NOB1Q9ULX3 412 aaKnown RBP13.75□□□□□ -0.21
RPE-202ENST00000359429 EFCAB6Q5THR3 1501 aa13.74□□□□□ -0.21
RPE-202ENST00000359429 ADGRB1O14514 1584 aa13.74□□□□□ -0.21
RPE-202ENST00000359429 ATF7IPQ6VMQ6 1270 aa13.74□□□□□ -0.21
RPE-202ENST00000359429 TMEM57Q8N5G2 664 aa13.74□□□□□ -0.21
RPE-202ENST00000359429 FANCAO15360 1455 aa13.74□□□□□ -0.21
RPE-202ENST00000359429 KIF1BO60333 1816 aa13.73□□□□□ -0.21
RPE-202ENST00000359429 DDIT3P35638 169 aa13.73□□□□□ -0.21
RPE-202ENST00000359429 TMPOP42166 694 aaKnown RBP13.73□□□□□ -0.21
RPE-202ENST00000359429 NUTM2DQ5VT03 806 aaPredicted RBP13.73□□□□□ -0.21
RPE-202ENST00000359429 DDX19BQ9UMR2 479 aa13.73□□□□□ -0.21
RPE-202ENST00000359429 SETBP1Q9Y6X0 1596 aa13.73□□□□□ -0.21
RPE-202ENST00000359429 ARAP3Q8WWN8 1544 aa13.73□□□□□ -0.21
RPE-202ENST00000359429 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
RPE-202ENST00000359429 CABP2Q9NPB3 220 aa13.73□□□□□ -0.21
RPE-202ENST00000359429 ADGRB3O60242 1522 aa13.72□□□□□ -0.21
RPE-202ENST00000359429 PPRC1Q5VV67 1664 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms