RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 C9orf78Q9NZ63 289 aaPredicted RBP23.01■■□□□ 1.27
BRPF3-202ENST00000357641 LRRFIP1Q32MZ4 808 aaKnown RBP23.01■■□□□ 1.27
BRPF3-202ENST00000357641 TRDNQ13061 729 aa23■■□□□ 1.27
BRPF3-202ENST00000357641 HSP90AB2PQ58FF8 381 aa23■■□□□ 1.27
BRPF3-202ENST00000357641 KINO60870 393 aaKnown RBP23■■□□□ 1.27
BRPF3-202ENST00000357641 USP8P40818 1118 aa23■■□□□ 1.27
BRPF3-202ENST00000357641 ABCF1Q8NE71 845 aaKnown RBP eCLIP23■■□□□ 1.27
BRPF3-202ENST00000357641 PDZRN3Q9UPQ7 1066 aa23■■□□□ 1.27
BRPF3-202ENST00000357641 RIPK4P57078 832 aa23■■□□□ 1.27
BRPF3-202ENST00000357641 NEK4P51957 841 aa23■■□□□ 1.27
BRPF3-202ENST00000357641 CT47A1Q5JQC4 288 aaPredicted RBP23■■□□□ 1.27
BRPF3-202ENST00000357641 EIF2S2P20042 333 aaKnown RBP22.99■■□□□ 1.27
BRPF3-202ENST00000357641 SAFBQ15424 915 aaKnown RBP eCLIP22.98■■□□□ 1.27
BRPF3-202ENST00000357641 ZMYND15Q9H091 742 aa22.98■■□□□ 1.27
BRPF3-202ENST00000357641 EIF3JO75822 258 aaKnown RBP22.98■■□□□ 1.27
BRPF3-202ENST00000357641 ZSCAN30Q86W11 494 aa22.98■■□□□ 1.27
BRPF3-202ENST00000357641 AAMPQ13685 434 aa22.98■■□□□ 1.27
BRPF3-202ENST00000357641 SMARCE1Q969G3 411 aa22.98■■□□□ 1.27
BRPF3-202ENST00000357641 CCDC192P0DO97 292 aa22.97■■□□□ 1.27
BRPF3-202ENST00000357641 FAM177A1Q8N128 213 aaPredicted RBP22.97■■□□□ 1.27
BRPF3-202ENST00000357641 CENPHQ9H3R5 247 aa22.97■■□□□ 1.27
BRPF3-202ENST00000357641 BRPF1P55201 1214 aaPredicted RBP22.97■■□□□ 1.27
BRPF3-202ENST00000357641 RABEP1Q15276 862 aa22.97■■□□□ 1.27
BRPF3-202ENST00000357641 ZHX1Q9UKY1 873 aaPredicted RBP22.97■■□□□ 1.27
BRPF3-202ENST00000357641 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
BRPF3-202ENST00000357641 OFD1O75665 1012 aa22.96■■□□□ 1.27
BRPF3-202ENST00000357641 MYO6Q9UM54 1294 aa22.96■■□□□ 1.27
BRPF3-202ENST00000357641 MCM4P33991 863 aa22.96■■□□□ 1.27
BRPF3-202ENST00000357641 KDM4AO75164 1064 aa22.96■■□□□ 1.27
BRPF3-202ENST00000357641 FAM193AP78312 1265 aa22.96■■□□□ 1.27
BRPF3-202ENST00000357641 TMX4Q9H1E5 349 aaPredicted RBP22.96■■□□□ 1.27
BRPF3-202ENST00000357641 CGNQ9P2M7 1197 aaKnown RBP22.96■■□□□ 1.27
BRPF3-202ENST00000357641 ERLIN1O75477 346 aa22.96■■□□□ 1.27
BRPF3-202ENST00000357641 CDCA7LQ96GN5 454 aa22.95■■□□□ 1.27
BRPF3-202ENST00000357641 RUNDC1Q96C34 613 aa22.95■■□□□ 1.26
BRPF3-202ENST00000357641 CNTLNQ9NXG0 1405 aa22.95■■□□□ 1.26
BRPF3-202ENST00000357641 GIMAP7Q8NHV1 300 aa22.94■■□□□ 1.26
BRPF3-202ENST00000357641 CEBPZQ03701 1054 aaKnown RBP22.94■■□□□ 1.26
BRPF3-202ENST00000357641 GOLGA6L10A6NI86 522 aa22.94■■□□□ 1.26
BRPF3-202ENST00000357641 G3V3G9 751 aa22.94■■□□□ 1.26
BRPF3-202ENST00000357641 G3BP1Q13283 466 aaKnown RBP eCLIP22.94■■□□□ 1.26
BRPF3-202ENST00000357641 DCAF8Q5TAQ9 597 aa22.94■■□□□ 1.26
BRPF3-202ENST00000357641 ERC2O15083 957 aa22.94■■□□□ 1.26
BRPF3-202ENST00000357641 CCDC7Q96M83 1385 aa22.93■■□□□ 1.26
BRPF3-202ENST00000357641 NGEFQ8N5V2 710 aa22.93■■□□□ 1.26
BRPF3-202ENST00000357641 TRERF1Q96PN7 1200 aa22.93■■□□□ 1.26
BRPF3-202ENST00000357641 PDCL3Q9H2J4 239 aa22.93■■□□□ 1.26
BRPF3-202ENST00000357641 RAD21O60216 631 aa22.93■■□□□ 1.26
BRPF3-202ENST00000357641 AKNAQ7Z591 1439 aa22.93■■□□□ 1.26
BRPF3-202ENST00000357641 SERPINC1P01008 464 aa22.92■■□□□ 1.26
BRPF3-202ENST00000357641 EPS15P42566 896 aa22.92■■□□□ 1.26
BRPF3-202ENST00000357641 GOLGA6L7A0A1B0GV03 622 aa22.92■■□□□ 1.26
BRPF3-202ENST00000357641 FKBP5Q13451 457 aaPredicted RBP22.92■■□□□ 1.26
BRPF3-202ENST00000357641 FILIP1LQ4L180 1135 aa22.92■■□□□ 1.26
BRPF3-202ENST00000357641 CCDC102AQ96A19 550 aa22.92■■□□□ 1.26
BRPF3-202ENST00000357641 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
BRPF3-202ENST00000357641 ERICH2A1L162 156 aa22.92■■□□□ 1.26
BRPF3-202ENST00000357641 K7ELQ4 463 aaPredicted RBP22.92■■□□□ 1.26
BRPF3-202ENST00000357641 ODF2Q5BJF6 829 aa22.92■■□□□ 1.26
BRPF3-202ENST00000357641 PSMA5P28066 241 aa22.91■■□□□ 1.26
BRPF3-202ENST00000357641 TNMDQ9H2S6 317 aa22.91■■□□□ 1.26
BRPF3-202ENST00000357641 DHX16O60231 1041 aaKnown RBP22.91■■□□□ 1.26
BRPF3-202ENST00000357641 NGDNQ8NEJ9 315 aaKnown RBP22.91■■□□□ 1.26
BRPF3-202ENST00000357641 KIF7Q2M1P5 1343 aa22.91■■□□□ 1.26
BRPF3-202ENST00000357641 NEXNQ0ZGT2 675 aa22.91■■□□□ 1.26
BRPF3-202ENST00000357641 CWC22Q9HCG8 908 aaKnown RBP22.9■■□□□ 1.26
BRPF3-202ENST00000357641 MCM2P49736 904 aa22.9■■□□□ 1.26
BRPF3-202ENST00000357641 TCEAL9Q9UHQ7 104 aa22.89■■□□□ 1.26
BRPF3-202ENST00000357641 NUTM2FA1L443 756 aa22.89■■□□□ 1.26
BRPF3-202ENST00000357641 ZFYVE27Q5T4F4 411 aa22.89■■□□□ 1.25
BRPF3-202ENST00000357641 DIAPH1O60610 1272 aaKnown RBP22.88■■□□□ 1.25
BRPF3-202ENST00000357641 IBSPP21815 317 aaPredicted RBP22.88■■□□□ 1.25
BRPF3-202ENST00000357641 HNRNPMP52272 730 aaKnown RBP eCLIP22.88■■□□□ 1.25
BRPF3-202ENST00000357641 NINLQ9Y2I6 1382 aa22.88■■□□□ 1.25
BRPF3-202ENST00000357641 ZRSR2Q15696 482 aaKnown RBP22.88■■□□□ 1.25
BRPF3-202ENST00000357641 RALYLQ86SE5 291 aaKnown RBP22.87■■□□□ 1.25
BRPF3-202ENST00000357641 GPATCH11Q8N954 259 aa22.87■■□□□ 1.25
BRPF3-202ENST00000357641 GTF2E1P29083 439 aaPredicted RBP22.87■■□□□ 1.25
BRPF3-202ENST00000357641 CCDC144AA2RUR9 1427 aa22.86■■□□□ 1.25
BRPF3-202ENST00000357641 XPCQ01831 940 aaPredicted RBP22.86■■□□□ 1.25
BRPF3-202ENST00000357641 COG3Q96JB2 828 aa22.86■■□□□ 1.25
BRPF3-202ENST00000357641 CNTROBQ8N137 903 aa22.86■■□□□ 1.25
BRPF3-202ENST00000357641 TRIM34Q9BYJ4 488 aa22.85■■□□□ 1.25
BRPF3-202ENST00000357641 LRRCC1Q9C099 1032 aa22.85■■□□□ 1.25
BRPF3-202ENST00000357641 DYDC1Q8WWB3 177 aa22.85■■□□□ 1.25
BRPF3-202ENST00000357641 HSP90AB4PQ58FF6 505 aa22.85■■□□□ 1.25
BRPF3-202ENST00000357641 AMOTL1Q8IY63 956 aa22.85■■□□□ 1.25
BRPF3-202ENST00000357641 CCDC181Q5TID7 509 aa22.84■■□□□ 1.25
BRPF3-202ENST00000357641 KIF3BO15066 747 aa22.84■■□□□ 1.25
BRPF3-202ENST00000357641 PDCP20941 246 aa22.84■■□□□ 1.25
BRPF3-202ENST00000357641 ZNF396Q96N95 335 aaPredicted RBP22.84■■□□□ 1.25
BRPF3-202ENST00000357641 CALCOCO1Q9P1Z2 691 aa22.84■■□□□ 1.25
BRPF3-202ENST00000357641 TMCO3Q6UWJ1 677 aa22.84■■□□□ 1.25
BRPF3-202ENST00000357641 MAGEC2Q9UBF1 373 aaPredicted RBP22.84■■□□□ 1.25
BRPF3-202ENST00000357641 DHX8Q14562 1220 aaKnown RBP22.83■■□□□ 1.25
BRPF3-202ENST00000357641 C1orf141Q5JVX7 400 aa22.83■■□□□ 1.25
BRPF3-202ENST00000357641 PPFIBP1Q86W92 1011 aa22.83■■□□□ 1.25
BRPF3-202ENST00000357641 ERLIN2O94905 339 aa22.83■■□□□ 1.25
BRPF3-202ENST00000357641 TEFQ10587 303 aa22.83■■□□□ 1.25
BRPF3-202ENST00000357641 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.83■■□□□ 1.259e-7■■■■■ 50.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms