RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 RIC3Q7Z5B4 369 aa12.7□□□□□ -0.38
FXR1-202ENST00000357559 MATR3P43243 847 aaKnown RBP eCLIP12.69□□□□□ -0.38
FXR1-202ENST00000357559 FAM193AP78312 1265 aa12.69□□□□□ -0.38
FXR1-202ENST00000357559 ZKSCAN2Q63HK3 967 aa12.69□□□□□ -0.38
FXR1-202ENST00000357559 PANK3Q9H999 370 aa12.69□□□□□ -0.38
FXR1-202ENST00000357559 EEA1Q15075 1411 aa12.69□□□□□ -0.38
FXR1-202ENST00000357559 CENPQQ7L2Z9 268 aaPredicted RBP12.69□□□□□ -0.38
FXR1-202ENST00000357559 TAX1BP1Q86VP1 789 aa12.69□□□□□ -0.38
FXR1-202ENST00000357559 WRNQ14191 1432 aaPredicted RBP eCLIP12.69□□□□□ -0.38
FXR1-202ENST00000357559 KAT6BQ8WYB5 2073 aa12.69□□□□□ -0.38
FXR1-202ENST00000357559 REC8O95072 547 aa12.69□□□□□ -0.38
FXR1-202ENST00000357559 MYO6Q9UM54 1294 aa12.69□□□□□ -0.38
FXR1-202ENST00000357559 SEPT11Q9NVA2 429 aaKnown RBP12.68□□□□□ -0.38
FXR1-202ENST00000357559 FAM177A1Q8N128 213 aaPredicted RBP12.68□□□□□ -0.38
FXR1-202ENST00000357559 HMOX1P09601 288 aa12.68□□□□□ -0.38
FXR1-202ENST00000357559 DNAJC2Q99543 621 aaKnown RBP12.68□□□□□ -0.38
FXR1-202ENST00000357559 MAGEC2Q9UBF1 373 aaPredicted RBP12.68□□□□□ -0.38
FXR1-202ENST00000357559 CHMP4BP1P59074 171 aa12.68□□□□□ -0.38
FXR1-202ENST00000357559 ZRSR2Q15696 482 aaKnown RBP12.67□□□□□ -0.38
FXR1-202ENST00000357559 SDF4Q9BRK5 362 aa12.67□□□□□ -0.38
FXR1-202ENST00000357559 MPNDQ8N594 471 aa12.67□□□□□ -0.38
FXR1-202ENST00000357559 RBM10P98175 930 aaKnown RBP12.67□□□□□ -0.38
FXR1-202ENST00000357559 WDR70Q9NW82 654 aa12.67□□□□□ -0.38
FXR1-202ENST00000357559 DDX58O95786 925 aaKnown RBP12.66□□□□□ -0.38
FXR1-202ENST00000357559 FAM43AQ8N2R8 423 aa12.66□□□□□ -0.38
FXR1-202ENST00000357559 PDCL3Q9H2J4 239 aa12.66□□□□□ -0.38
FXR1-202ENST00000357559 LNPKQ9C0E8 428 aa12.66□□□□□ -0.38
FXR1-202ENST00000357559 NAT10Q9H0A0 1025 aaKnown RBP12.66□□□□□ -0.38
FXR1-202ENST00000357559 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.66□□□□□ -0.38
FXR1-202ENST00000357559 FHAD1B1AJZ9 1412 aa12.65□□□□□ -0.38
FXR1-202ENST00000357559 CT47B1P0C2W7 299 aaPredicted RBP12.65□□□□□ -0.38
FXR1-202ENST00000357559 TANGO6Q9C0B7 1094 aa12.65□□□□□ -0.38
FXR1-202ENST00000357559 RIPK4P57078 832 aa12.65□□□□□ -0.38
FXR1-202ENST00000357559 TRIM5Q9C035 493 aa12.65□□□□□ -0.38
FXR1-202ENST00000357559 TSPYL4Q9UJ04 414 aa12.65□□□□□ -0.38
FXR1-202ENST00000357559 RBM5P52756 815 aaKnown RBP eCLIP12.65□□□□□ -0.38
FXR1-202ENST00000357559 XBP1P17861 261 aa12.64□□□□□ -0.39
FXR1-202ENST00000357559 CWC15Q9P013 229 aaKnown RBP12.64□□□□□ -0.39
FXR1-202ENST00000357559 PIBF1Q8WXW3 757 aa12.63□□□□□ -0.39
FXR1-202ENST00000357559 NEBLO76041 1014 aa12.63□□□□□ -0.39
FXR1-202ENST00000357559 STK3Q13188 491 aa12.63□□□□□ -0.39
FXR1-202ENST00000357559 INTS3Q68E01 1043 aaKnown RBP12.63□□□□□ -0.39
FXR1-202ENST00000357559 MAP4K4O95819 1239 aaPredicted RBP12.63□□□□□ -0.39
FXR1-202ENST00000357559 LEKR1Q6ZMV7 388 aa12.63□□□□□ -0.39
FXR1-202ENST00000357559 PRDM2Q13029 1718 aa12.62□□□□□ -0.39
FXR1-202ENST00000357559 SSR1P43307 286 aaKnown RBP12.62□□□□□ -0.39
FXR1-202ENST00000357559 NLRP13Q86W25 1043 aa12.62□□□□□ -0.39
FXR1-202ENST00000357559 PSMD1Q99460 953 aa12.62□□□□□ -0.39
FXR1-202ENST00000357559 GOLGA6L10A6NI86 522 aa12.62□□□□□ -0.39
FXR1-202ENST00000357559 NASPP49321 788 aaPredicted RBP12.62□□□□□ -0.39
FXR1-202ENST00000357559 RRP1P56182 461 aaKnown RBP12.62□□□□□ -0.39
FXR1-202ENST00000357559 DEF6Q9H4E7 631 aa12.62□□□□□ -0.39
FXR1-202ENST00000357559 SPINK5Q9NQ38 1064 aaPredicted RBP12.62□□□□□ -0.39
FXR1-202ENST00000357559 KIF15Q9NS87 1388 aa12.62□□□□□ -0.39
FXR1-202ENST00000357559 MYCNP04198 464 aaPredicted RBP12.62□□□□□ -0.39
FXR1-202ENST00000357559 SMARCE1Q969G3 411 aa12.61□□□□□ -0.39
FXR1-202ENST00000357559 RAB3GAP2Q9H2M9 1393 aa12.61□□□□□ -0.39
FXR1-202ENST00000357559 CAVIN1Q6NZI2 390 aaKnown RBP12.61□□□□□ -0.39
FXR1-202ENST00000357559 CLASRPQ8N2M8 674 aaKnown RBP12.61□□□□□ -0.39
FXR1-202ENST00000357559 CUX2O14529 1486 aa12.61□□□□□ -0.39
FXR1-202ENST00000357559 TTC16Q8NEE8 873 aa12.61□□□□□ -0.39
FXR1-202ENST00000357559 FSD1Q9BTV5 496 aa12.61□□□□□ -0.39
FXR1-202ENST00000357559 TAF3Q5VWG9 929 aa12.61□□□□□ -0.39
FXR1-202ENST00000357559 APAF1O14727 1248 aa12.6□□□□□ -0.39
FXR1-202ENST00000357559 ERLIN2O94905 339 aa12.6□□□□□ -0.39
FXR1-202ENST00000357559 CCDC181Q5TID7 509 aa12.6□□□□□ -0.39
FXR1-202ENST00000357559 ERC2O15083 957 aa12.6□□□□□ -0.39
FXR1-202ENST00000357559 ERCC4Q92889 916 aaPredicted RBP12.6□□□□□ -0.39
FXR1-202ENST00000357559 E9PSI1 815 aa12.59□□□□□ -0.39
FXR1-202ENST00000357559 GBP2P32456 591 aaPredicted RBP12.59□□□□□ -0.39
FXR1-202ENST00000357559 RBM42Q9BTD8 480 aaKnown RBP12.59□□□□□ -0.39
FXR1-202ENST00000357559 FILIP1LQ4L180 1135 aa12.59□□□□□ -0.39
FXR1-202ENST00000357559 NINLQ9Y2I6 1382 aa12.59□□□□□ -0.39
FXR1-202ENST00000357559 MYBBP1AQ9BQG0 1328 aaKnown RBP12.59□□□□□ -0.39
FXR1-202ENST00000357559 HSP90AB4PQ58FF6 505 aa12.59□□□□□ -0.39
FXR1-202ENST00000357559 KANK4Q5T7N3 995 aaPredicted RBP12.59□□□□□ -0.39
FXR1-202ENST00000357559 ANKRD30AQ9BXX3 1397 aa12.59□□□□□ -0.39
FXR1-202ENST00000357559 ST20-MTHFSA0A0A6YYL1 179 aa12.58□□□□□ -0.39
FXR1-202ENST00000357559 SERPINC1P01008 464 aa12.58□□□□□ -0.39
FXR1-202ENST00000357559 MPHOSPH10O00566 681 aaKnown RBP12.58□□□□□ -0.4
FXR1-202ENST00000357559 TXLNAP40222 546 aa12.58□□□□□ -0.4
FXR1-202ENST00000357559 HMGN5P82970 282 aaKnown RBP12.58□□□□□ -0.4
FXR1-202ENST00000357559 L3MBTL2Q969R5 705 aa12.58□□□□□ -0.4
FXR1-202ENST00000357559 DDX19BQ9UMR2 479 aa12.58□□□□□ -0.4
FXR1-202ENST00000357559 CCDC39Q9UFE4 941 aa12.58□□□□□ -0.4
FXR1-202ENST00000357559 TTC39AQ5SRH9 613 aa12.58□□□□□ -0.4
FXR1-202ENST00000357559 DZIP1LQ8IYY4 767 aaKnown RBP12.58□□□□□ -0.4
FXR1-202ENST00000357559 KINO60870 393 aaKnown RBP12.58□□□□□ -0.4
FXR1-202ENST00000357559 ANKRD18AQ8IVF6 992 aa12.58□□□□□ -0.4
FXR1-202ENST00000357559 SART3Q15020 963 aaKnown RBP12.58□□□□□ -0.4
FXR1-202ENST00000357559 KIF6Q6ZMV9 814 aa12.58□□□□□ -0.4
FXR1-202ENST00000357559 TNIKQ9UKE5 1360 aa12.57□□□□□ -0.4
FXR1-202ENST00000357559 STRN4Q9NRL3 753 aa12.57□□□□□ -0.4
FXR1-202ENST00000357559 C1orf115Q9H7X2 142 aa12.57□□□□□ -0.4
FXR1-202ENST00000357559 EVC2Q86UK5 1308 aa12.57□□□□□ -0.4
FXR1-202ENST00000357559 NLRP2Q9NX02 1062 aa12.57□□□□□ -0.4
FXR1-202ENST00000357559 ERICH4A6NGS2 130 aa12.57□□□□□ -0.4
FXR1-202ENST00000357559 KIAA0754O94854 1291 aa12.57□□□□□ -0.4
FXR1-202ENST00000357559 CNTROBQ8N137 903 aa12.57□□□□□ -0.4
FXR1-202ENST00000357559 CHMP5Q9NZZ3 219 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms