RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 RGPD1P0DJD0 1748 aa5.41□□□□□ -1.54
SMC1B-201ENST00000357450 MIER1Q8N108 512 aa5.41□□□□□ -1.54
SMC1B-201ENST00000357450 PREX1Q8TCU6 1659 aa5.41□□□□□ -1.54
SMC1B-201ENST00000357450 ASXL1Q8IXJ9 1541 aa5.41□□□□□ -1.54
SMC1B-201ENST00000357450 KIF13AQ9H1H9 1805 aa5.41□□□□□ -1.54
SMC1B-201ENST00000357450 TSPOAP1O95153 1857 aa5.4□□□□□ -1.54
SMC1B-201ENST00000357450 VASPP50552 380 aaPredicted RBP5.4□□□□□ -1.54
SMC1B-201ENST00000357450 GPR153Q6NV75 609 aa5.4□□□□□ -1.54
SMC1B-201ENST00000357450 ANKRD30BQ9BXX2 1392 aa5.4□□□□□ -1.54
SMC1B-201ENST00000357450 NALCNQ8IZF0 1738 aa5.4□□□□□ -1.54
SMC1B-201ENST00000357450 CCDC18Q5T9S5 1454 aa5.4□□□□□ -1.55
SMC1B-201ENST00000357450 ZFYVE16Q7Z3T8 1539 aa5.4□□□□□ -1.55
SMC1B-201ENST00000357450 USP35Q9P2H5 1018 aa5.4□□□□□ -1.55
SMC1B-201ENST00000357450 ABCC1P33527 1531 aa5.4□□□□□ -1.55
SMC1B-201ENST00000357450 FBXO31Q5XUX0 539 aaPredicted RBP5.39□□□□□ -1.55
SMC1B-201ENST00000357450 CSB-PGBD3P0DP91 1061 aa5.39□□□□□ -1.55
SMC1B-201ENST00000357450 TRIM35Q9UPQ4 493 aa5.39□□□□□ -1.55
SMC1B-201ENST00000357450 KNDC1Q76NI1 1749 aa5.39□□□□□ -1.55
SMC1B-201ENST00000357450 POTEGQ6S5H5 508 aa5.39□□□□□ -1.55
SMC1B-201ENST00000357450 ARXQ96QS3 562 aa5.39□□□□□ -1.55
SMC1B-201ENST00000357450 TOPAZ1Q8N9V7 1692 aa5.38□□□□□ -1.55
SMC1B-201ENST00000357450 DDX60Q8IY21 1712 aaKnown RBP5.38□□□□□ -1.55
SMC1B-201ENST00000357450 NLRP1Q9C000 1473 aa5.38□□□□□ -1.55
SMC1B-201ENST00000357450 DAPK1P53355 1430 aa5.38□□□□□ -1.55
SMC1B-201ENST00000357450 C8orf37Q96NL8 207 aa5.38□□□□□ -1.55
SMC1B-201ENST00000357450 ADGRB2O60241 1585 aa5.38□□□□□ -1.55
SMC1B-201ENST00000357450 ZMYM4Q5VZL5 1548 aa5.38□□□□□ -1.55
SMC1B-201ENST00000357450 ARAP3Q8WWN8 1544 aa5.38□□□□□ -1.55
SMC1B-201ENST00000357450 CAMSAP2Q08AD1 1489 aa5.38□□□□□ -1.55
SMC1B-201ENST00000357450 ZNF644Q9H582 1327 aaPredicted RBP5.38□□□□□ -1.55
SMC1B-201ENST00000357450 EVA1CP58658 441 aa5.37□□□□□ -1.55
SMC1B-201ENST00000357450 SYNMO15061 1565 aa5.37□□□□□ -1.55
SMC1B-201ENST00000357450 NPM2Q86SE8 214 aaKnown RBP5.37□□□□□ -1.55
SMC1B-201ENST00000357450 TSPYL2Q9H2G4 693 aaPredicted RBP5.37□□□□□ -1.55
SMC1B-201ENST00000357450 FAM135AQ9P2D6 1515 aa5.37□□□□□ -1.55
SMC1B-201ENST00000357450 TET3O43151 1660 aa5.37□□□□□ -1.55
SMC1B-201ENST00000357450 FMN1Q68DA7 1419 aa5.37□□□□□ -1.55
SMC1B-201ENST00000357450 ROCK1Q13464 1354 aa5.36□□□□□ -1.55
SMC1B-201ENST00000357450 ATP10BO94823 1461 aa5.36□□□□□ -1.55
SMC1B-201ENST00000357450 DPY19L2Q6NUT2 758 aa5.36□□□□□ -1.55
SMC1B-201ENST00000357450 MIA2Q96PC5 1412 aa5.36□□□□□ -1.55
SMC1B-201ENST00000357450 XPCQ01831 940 aaPredicted RBP5.36□□□□□ -1.55
SMC1B-201ENST00000357450 NGDNQ8NEJ9 315 aaKnown RBP5.36□□□□□ -1.55
SMC1B-201ENST00000357450 RIMS1Q86UR5 1692 aaKnown RBP5.36□□□□□ -1.55
SMC1B-201ENST00000357450 ARHGAP5Q13017 1502 aa5.36□□□□□ -1.55
SMC1B-201ENST00000357450 SETD5Q9C0A6 1442 aa5.36□□□□□ -1.55
SMC1B-201ENST00000357450 AKAP12Q02952 1782 aa5.36□□□□□ -1.55
SMC1B-201ENST00000357450 ZNF335Q9H4Z2 1342 aaPredicted RBP5.35□□□□□ -1.55
SMC1B-201ENST00000357450 NPHP1O15259 732 aa5.35□□□□□ -1.55
SMC1B-201ENST00000357450 SLC34A2O95436 690 aa5.35□□□□□ -1.55
SMC1B-201ENST00000357450 CCDC184Q52MB2 194 aa5.35□□□□□ -1.55
SMC1B-201ENST00000357450 TMC1Q8TDI8 760 aa5.35□□□□□ -1.55
SMC1B-201ENST00000357450 ESCO1Q5FWF5 840 aa5.34□□□□□ -1.55
SMC1B-201ENST00000357450 OCEL1Q9H607 264 aa5.34□□□□□ -1.55
SMC1B-201ENST00000357450 ADGRL1O94910 1474 aa5.34□□□□□ -1.55
SMC1B-201ENST00000357450 LRPPRCP42704 1394 aaKnown RBP5.34□□□□□ -1.55
SMC1B-201ENST00000357450 MFRPQ9BY79 579 aa5.34□□□□□ -1.55
SMC1B-201ENST00000357450 WDR7Q9Y4E6 1490 aa5.34□□□□□ -1.56
SMC1B-201ENST00000357450 RALGAPBQ86X10 1494 aa5.33□□□□□ -1.56
SMC1B-201ENST00000357450 PSME1Q06323 249 aa5.33□□□□□ -1.56
SMC1B-201ENST00000357450 SPNS2Q8IVW8 549 aa5.33□□□□□ -1.56
SMC1B-201ENST00000357450 HSPA1LP34931 641 aa5.33□□□□□ -1.56
SMC1B-201ENST00000357450 RSPH4AQ5TD94 716 aa5.33□□□□□ -1.56
SMC1B-201ENST00000357450 STRN4Q9NRL3 753 aa5.33□□□□□ -1.56
SMC1B-201ENST00000357450 CASZ1Q86V15 1759 aa5.33□□□□□ -1.56
SMC1B-201ENST00000357450 HECW2Q9P2P5 1572 aa5.33□□□□□ -1.56
SMC1B-201ENST00000357450 PPM1GO15355 546 aaPredicted RBP5.33□□□□□ -1.56
SMC1B-201ENST00000357450 FANCAO15360 1455 aa5.32□□□□□ -1.56
SMC1B-201ENST00000357450 TRPM2O94759 1503 aa5.32□□□□□ -1.56
SMC1B-201ENST00000357450 LMTK2Q8IWU2 1503 aa5.32□□□□□ -1.56
SMC1B-201ENST00000357450 ERBINQ96RT1 1412 aa5.32□□□□□ -1.56
SMC1B-201ENST00000357450 SYCP2Q9BX26 1530 aa5.32□□□□□ -1.56
SMC1B-201ENST00000357450 SIPA1L3O60292 1781 aaPredicted RBP5.32□□□□□ -1.56
SMC1B-201ENST00000357450 SRPK2P78362 688 aaKnown RBP5.31□□□□□ -1.56
SMC1B-201ENST00000357450 MED14O60244 1454 aa5.31□□□□□ -1.56
SMC1B-201ENST00000357450 A2MP01023 1474 aa5.31□□□□□ -1.56
SMC1B-201ENST00000357450 IQSEC2Q5JU85 1478 aa5.31□□□□□ -1.56
SMC1B-201ENST00000357450 CDC42BPGQ6DT37 1551 aa5.31□□□□□ -1.56
SMC1B-201ENST00000357450 SYTL4Q96C24 671 aaPredicted RBP5.31□□□□□ -1.56
SMC1B-201ENST00000357450 GLI3P10071 1580 aa5.31□□□□□ -1.56
SMC1B-201ENST00000357450 MON2Q7Z3U7 1717 aa5.31□□□□□ -1.56
SMC1B-201ENST00000357450 QRICH2Q9H0J4 1663 aa5.31□□□□□ -1.56
SMC1B-201ENST00000357450 GPRASP1Q5JY77 1395 aa5.31□□□□□ -1.56
SMC1B-201ENST00000357450 UHRF1BP1LA0JNW5 1464 aa5.31□□□□□ -1.56
SMC1B-201ENST00000357450 PRKCSHP14314 528 aaPredicted RBP5.31□□□□□ -1.56
SMC1B-201ENST00000357450 NUTM2GQ5VZR2 741 aa5.31□□□□□ -1.56
SMC1B-201ENST00000357450 CCER1Q8TC90 406 aaPredicted RBP5.31□□□□□ -1.56
SMC1B-201ENST00000357450 BPTFQ12830 3046 aa5.3□□□□□ -1.56
SMC1B-201ENST00000357450 ADGRB3O60242 1522 aa5.3□□□□□ -1.56
SMC1B-201ENST00000357450 WASHC2AQ641Q2 1341 aa5.3□□□□□ -1.56
SMC1B-201ENST00000357450 HIRIP3Q9BW71 556 aaPredicted RBP5.3□□□□□ -1.56
SMC1B-201ENST00000357450 PCDHB8Q9UN66 801 aa5.3□□□□□ -1.56
SMC1B-201ENST00000357450 PCDHB13Q9Y5F0 798 aa5.3□□□□□ -1.56
SMC1B-201ENST00000357450 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.3□□□□□ -1.56
SMC1B-201ENST00000357450 PTPRTO14522 1441 aa5.3□□□□□ -1.56
SMC1B-201ENST00000357450 NUP155O75694 1391 aa5.3□□□□□ -1.56
SMC1B-201ENST00000357450 NKX1-1Q15270 411 aaPredicted RBP5.29□□□□□ -1.56
SMC1B-201ENST00000357450 LRRC37A3O60309 1634 aa5.29□□□□□ -1.56
SMC1B-201ENST00000357450 PDE3BQ13370 1112 aa5.29□□□□□ -1.56
SMC1B-201ENST00000357450 FKBP8Q14318 412 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms