RNA–Protein interactions for RNA: ENST00000356220.8

DCX-201, Transcript of doublecortin, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DCX, Length 3,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCX-201ENST00000356220 SETBP1Q9Y6X0 1596 aa12.07□□□□□ -0.48
DCX-201ENST00000356220 C1orf167Q5SNV9 1468 aa12.07□□□□□ -0.48
DCX-201ENST00000356220 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
DCX-201ENST00000356220 RRBP1Q9P2E9 1410 aaKnown RBP12.06□□□□□ -0.48
DCX-201ENST00000356220 WAPLQ7Z5K2 1190 aa12.05□□□□□ -0.48
DCX-201ENST00000356220 RPGRIP1LQ68CZ1 1315 aa12.05□□□□□ -0.48
DCX-201ENST00000356220 CLTCL1P53675 1640 aa12.05□□□□□ -0.48
DCX-201ENST00000356220 TMEM132EQ6IEE7 984 aa12.05□□□□□ -0.48
DCX-201ENST00000356220 TRPC5Q9UL62 973 aaPredicted RBP12.05□□□□□ -0.48
DCX-201ENST00000356220 NRXN3Q9Y4C0 1643 aa12.04□□□□□ -0.48
DCX-201ENST00000356220 LMOD2Q6P5Q4 547 aa12.04□□□□□ -0.48
DCX-201ENST00000356220 NPHP3Q7Z494 1330 aa12.04□□□□□ -0.48
DCX-201ENST00000356220 NEXMIFQ5QGS0 1516 aa12.04□□□□□ -0.48
DCX-201ENST00000356220 SRCAPQ6ZRS2 3230 aa12.04□□□□□ -0.48
DCX-201ENST00000356220 SHPRHQ149N8 1683 aa12.04□□□□□ -0.48
DCX-201ENST00000356220 XRN1Q8IZH2 1706 aaKnown RBP12.03□□□□□ -0.48
DCX-201ENST00000356220 ADGRF5Q8IZF2 1346 aa12.03□□□□□ -0.48
DCX-201ENST00000356220 SOS2Q07890 1332 aaPredicted RBP12.03□□□□□ -0.48
DCX-201ENST00000356220 NEUROD1Q13562 356 aa12.03□□□□□ -0.48
DCX-201ENST00000356220 SAFB2Q14151 953 aaKnown RBP eCLIP12.03□□□□□ -0.48
DCX-201ENST00000356220 CCDC144AA2RUR9 1427 aa12.02□□□□□ -0.49
DCX-201ENST00000356220 KIF1BO60333 1816 aa12.01□□□□□ -0.49
DCX-201ENST00000356220 RGS12O14924 1447 aa12.01□□□□□ -0.49
DCX-201ENST00000356220 MPHOSPH9Q99550 1183 aa12□□□□□ -0.49
DCX-201ENST00000356220 HFM1A2PYH4 1435 aa12□□□□□ -0.49
DCX-201ENST00000356220 PTCH1Q13635 1447 aa12□□□□□ -0.49
DCX-201ENST00000356220 CCDC9Q9Y3X0 531 aaKnown RBP12□□□□□ -0.49
DCX-201ENST00000356220 A0A0G2JS52 829 aa11.99□□□□□ -0.49
DCX-201ENST00000356220 NALCNQ8IZF0 1738 aa11.99□□□□□ -0.49
DCX-201ENST00000356220 CDK12Q9NYV4 1490 aaPredicted RBP11.98□□□□□ -0.49
DCX-201ENST00000356220 ATAD2Q6PL18 1390 aa11.98□□□□□ -0.49
DCX-201ENST00000356220 NHSL1Q5SYE7 1610 aa11.98□□□□□ -0.49
DCX-201ENST00000356220 FNBP4Q8N3X1 1017 aaPredicted RBP11.97□□□□□ -0.49
DCX-201ENST00000356220 LRPPRCP42704 1394 aaKnown RBP11.97□□□□□ -0.49
DCX-201ENST00000356220 KRT28Q7Z3Y7 464 aa11.97□□□□□ -0.49
DCX-201ENST00000356220 POGKQ9P215 609 aa11.97□□□□□ -0.49
DCX-201ENST00000356220 GTF3C3Q9Y5Q9 886 aa11.97□□□□□ -0.49
DCX-201ENST00000356220 ZRANB1Q9UGI0 708 aa11.96□□□□□ -0.49
DCX-201ENST00000356220 CABLES1Q8TDN4 633 aa11.96□□□□□ -0.5
DCX-201ENST00000356220 TIMELESSQ9UNS1 1208 aa11.96□□□□□ -0.5
DCX-201ENST00000356220 ANKRD30BQ9BXX2 1392 aa11.96□□□□□ -0.5
DCX-201ENST00000356220 PLEKHH1Q9ULM0 1364 aa11.96□□□□□ -0.5
DCX-201ENST00000356220 GJD4Q96KN9 370 aaPredicted RBP11.95□□□□□ -0.5
DCX-201ENST00000356220 CFAP70Q5T0N1 1121 aa11.95□□□□□ -0.5
DCX-201ENST00000356220 PSME1Q06323 249 aa11.95□□□□□ -0.5
DCX-201ENST00000356220 PMFBP1Q8TBY8 1022 aa11.94□□□□□ -0.5
DCX-201ENST00000356220 PHF8Q9UPP1 1060 aa11.94□□□□□ -0.5
DCX-201ENST00000356220 KDM2AQ9Y2K7 1162 aa11.94□□□□□ -0.5
DCX-201ENST00000356220 SF3B2Q13435 895 aaKnown RBP11.93□□□□□ -0.5
DCX-201ENST00000356220 PRAM1Q96QH2 718 aa11.93□□□□□ -0.5
DCX-201ENST00000356220 UNC5CLQ8IV45 518 aa11.92□□□□□ -0.5
DCX-201ENST00000356220 HIRIP3Q9BW71 556 aaPredicted RBP11.92□□□□□ -0.5
DCX-201ENST00000356220 DHX57Q6P158 1386 aaKnown RBP11.92□□□□□ -0.5
DCX-201ENST00000356220 ABCC11Q96J66 1382 aa11.92□□□□□ -0.5
DCX-201ENST00000356220 SPATA31A3Q5VYP0 1347 aa11.92□□□□□ -0.5
DCX-201ENST00000356220 TRAK1Q9UPV9 953 aa11.91□□□□□ -0.5
DCX-201ENST00000356220 YTHDC2Q9H6S0 1430 aaKnown RBP11.91□□□□□ -0.5
DCX-201ENST00000356220 ATRNO75882 1429 aa11.9□□□□□ -0.5
DCX-201ENST00000356220 MYOM2P54296 1465 aa11.9□□□□□ -0.51
DCX-201ENST00000356220 C14orf93Q9H972 538 aaKnown RBP11.89□□□□□ -0.51
DCX-201ENST00000356220 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
DCX-201ENST00000356220 DEFB132Q7Z7B7 95 aa11.89□□□□□ -0.51
DCX-201ENST00000356220 BCL9LQ86UU0 1499 aa11.89□□□□□ -0.51
DCX-201ENST00000356220 MINK1Q8N4C8 1332 aaPredicted RBP11.89□□□□□ -0.51
DCX-201ENST00000356220 SPATA31E1Q6ZUB1 1445 aa11.89□□□□□ -0.51
DCX-201ENST00000356220 SEPT12Q8IYM1 358 aa11.89□□□□□ -0.51
DCX-201ENST00000356220 CCDC125Q86Z20 511 aa11.88□□□□□ -0.51
DCX-201ENST00000356220 PXDNQ92626 1479 aa11.88□□□□□ -0.51
DCX-201ENST00000356220 CDC42BPGQ6DT37 1551 aa11.88□□□□□ -0.51
DCX-201ENST00000356220 PPLO60437 1756 aa11.88□□□□□ -0.51
DCX-201ENST00000356220 EP400Q96L91 3159 aa11.88□□□□□ -0.51
DCX-201ENST00000356220 NGDNQ8NEJ9 315 aaKnown RBP11.87□□□□□ -0.51
DCX-201ENST00000356220 DCAF11Q8TEB1 546 aa11.86□□□□□ -0.51
DCX-201ENST00000356220 PRAG1Q86YV5 1406 aa11.86□□□□□ -0.51
DCX-201ENST00000356220 TECPR2O15040 1411 aa11.86□□□□□ -0.51
DCX-201ENST00000356220 PIK3C2GO75747 1445 aa11.86□□□□□ -0.51
DCX-201ENST00000356220 GPRASP1Q5JY77 1395 aa11.85□□□□□ -0.51
DCX-201ENST00000356220 RALGAPBQ86X10 1494 aa11.84□□□□□ -0.51
DCX-201ENST00000356220 FAM98CQ17RN3 349 aaKnown RBP11.84□□□□□ -0.51
DCX-201ENST00000356220 KRT27Q7Z3Y8 459 aa11.84□□□□□ -0.51
DCX-201ENST00000356220 SIRT1Q96EB6 747 aa11.84□□□□□ -0.51
DCX-201ENST00000356220 BTG4Q9NY30 223 aa11.84□□□□□ -0.51
DCX-201ENST00000356220 TNS3Q68CZ2 1445 aa11.84□□□□□ -0.51
DCX-201ENST00000356220 FAM83GA6ND36 823 aa11.84□□□□□ -0.51
DCX-201ENST00000356220 VPS72Q15906 364 aa11.84□□□□□ -0.51
DCX-201ENST00000356220 ARHGEF10O15013 1369 aa11.83□□□□□ -0.52
DCX-201ENST00000356220 FAM182BQ5T319 152 aa11.82□□□□□ -0.52
DCX-201ENST00000356220 PRDM11Q9NQV5 511 aa11.82□□□□□ -0.52
DCX-201ENST00000356220 LAMC1P11047 1609 aa11.82□□□□□ -0.52
DCX-201ENST00000356220 RAB3GAP2Q9H2M9 1393 aa11.82□□□□□ -0.52
DCX-201ENST00000356220 BLMP54132 1417 aaPredicted RBP11.81□□□□□ -0.52
DCX-201ENST00000356220 PSDA5PKW4 1024 aaPredicted RBP11.81□□□□□ -0.52
DCX-201ENST00000356220 BAG6P46379 1132 aa11.81□□□□□ -0.52
DCX-201ENST00000356220 NUTM2GQ5VZR2 741 aa11.81□□□□□ -0.52
DCX-201ENST00000356220 SLIT2O94813 1529 aa11.81□□□□□ -0.52
DCX-201ENST00000356220 STRN4Q9NRL3 753 aa11.81□□□□□ -0.52
DCX-201ENST00000356220 USP35Q9P2H5 1018 aa11.81□□□□□ -0.52
DCX-201ENST00000356220 COL22A1Q8NFW1 1626 aaPredicted RBP11.8□□□□□ -0.52
DCX-201ENST00000356220 BCL11AQ9H165 835 aa11.8□□□□□ -0.52
DCX-201ENST00000356220 MIER1Q8N108 512 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms