RNA–Protein interactions for RNA: ENST00000356128.4

TRAPPC3L-201, Transcript of trafficking protein particle complex 3 like, humanhuman

TSL 2 BASIC

Gene TRAPPC3L, Length 2,421 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3L-201ENST00000356128 GLMNQ92990 594 aa9.23□□□□□ -0.93
TRAPPC3L-201ENST00000356128 PTPN23Q9H3S7 1636 aa9.23□□□□□ -0.93
TRAPPC3L-201ENST00000356128 ARHGAP5Q13017 1502 aa9.23□□□□□ -0.93
TRAPPC3L-201ENST00000356128 PPP1R15AO75807 674 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC3L-201ENST00000356128 MTMR14Q8NCE2 650 aa9.23□□□□□ -0.93
TRAPPC3L-201ENST00000356128 CALR3Q96L12 384 aaKnown RBP9.23□□□□□ -0.93
TRAPPC3L-201ENST00000356128 BMP2KQ9NSY1 1161 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC3L-201ENST00000356128 MIA2Q96PC5 1412 aa9.23□□□□□ -0.93
TRAPPC3L-201ENST00000356128 MYSM1Q5VVJ2 828 aa9.22□□□□□ -0.93
TRAPPC3L-201ENST00000356128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.22□□□□□ -0.93
TRAPPC3L-201ENST00000356128 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC3L-201ENST00000356128 ILDR1Q86SU0 546 aaPredicted RBP9.22□□□□□ -0.93
TRAPPC3L-201ENST00000356128 GPCPD1Q9NPB8 672 aa9.22□□□□□ -0.93
TRAPPC3L-201ENST00000356128 RFC5P40937 340 aa9.21□□□□□ -0.93
TRAPPC3L-201ENST00000356128 TTC37Q6PGP7 1564 aa9.21□□□□□ -0.94
TRAPPC3L-201ENST00000356128 TRIM52Q96A61 297 aa9.21□□□□□ -0.94
TRAPPC3L-201ENST00000356128 CAMSAP2Q08AD1 1489 aa9.2□□□□□ -0.94
TRAPPC3L-201ENST00000356128 TBC1D12O60347 775 aa9.2□□□□□ -0.94
TRAPPC3L-201ENST00000356128 PLPP6Q8IY26 295 aa9.2□□□□□ -0.94
TRAPPC3L-201ENST00000356128 PTPRKQ15262 1439 aa9.2□□□□□ -0.94
TRAPPC3L-201ENST00000356128 CD109Q6YHK3 1445 aa9.2□□□□□ -0.94
TRAPPC3L-201ENST00000356128 UNCXA6NJT0 531 aa9.2□□□□□ -0.94
TRAPPC3L-201ENST00000356128 CLCN1P35523 988 aa9.2□□□□□ -0.94
TRAPPC3L-201ENST00000356128 GOLGA2Q08379 1002 aa9.2□□□□□ -0.94
TRAPPC3L-201ENST00000356128 UPF1Q92900 1129 aaKnown RBP eCLIP9.2□□□□□ -0.94
TRAPPC3L-201ENST00000356128 CDHR5Q9HBB8 845 aa9.2□□□□□ -0.94
TRAPPC3L-201ENST00000356128 USP35Q9P2H5 1018 aa9.2□□□□□ -0.94
TRAPPC3L-201ENST00000356128 MAP3K9P80192 1104 aa9.19□□□□□ -0.94
TRAPPC3L-201ENST00000356128 AFAP1Q8N556 730 aa9.19□□□□□ -0.94
TRAPPC3L-201ENST00000356128 TRIM35Q9UPQ4 493 aa9.19□□□□□ -0.94
TRAPPC3L-201ENST00000356128 PLCH2O75038 1416 aa9.18□□□□□ -0.94
TRAPPC3L-201ENST00000356128 BRD1O95696 1058 aa9.18□□□□□ -0.94
TRAPPC3L-201ENST00000356128 FAM161AQ3B820 660 aa9.18□□□□□ -0.94
TRAPPC3L-201ENST00000356128 ITSN2Q9NZM3 1697 aa9.18□□□□□ -0.94
TRAPPC3L-201ENST00000356128 RAB3GAP2Q9H2M9 1393 aa9.18□□□□□ -0.94
TRAPPC3L-201ENST00000356128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.18□□□□□ -0.94
TRAPPC3L-201ENST00000356128 CDC42BPAQ5VT25 1732 aa9.18□□□□□ -0.94
TRAPPC3L-201ENST00000356128 RFX1P22670 979 aa9.17□□□□□ -0.94
TRAPPC3L-201ENST00000356128 ADAMTS19Q8TE59 1207 aa9.17□□□□□ -0.94
TRAPPC3L-201ENST00000356128 KDM6BO15054 1643 aa9.17□□□□□ -0.94
TRAPPC3L-201ENST00000356128 DAPK1P53355 1430 aa9.17□□□□□ -0.94
TRAPPC3L-201ENST00000356128 SETD5Q9C0A6 1442 aa9.17□□□□□ -0.94
TRAPPC3L-201ENST00000356128 IVNS1ABPQ9Y6Y0 642 aa9.17□□□□□ -0.94
TRAPPC3L-201ENST00000356128 ABCC5O15440 1437 aa9.17□□□□□ -0.94
TRAPPC3L-201ENST00000356128 ACIN1Q9UKV3 1341 aaKnown RBP9.17□□□□□ -0.94
TRAPPC3L-201ENST00000356128 NPDC1Q9NQX5 325 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC3L-201ENST00000356128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRAPPC3L-201ENST00000356128 FANCAO15360 1455 aa9.16□□□□□ -0.94
TRAPPC3L-201ENST00000356128 TCOF1Q13428 1488 aaKnown RBP9.16□□□□□ -0.94
TRAPPC3L-201ENST00000356128 RAPGEF3O95398 923 aa9.16□□□□□ -0.94
TRAPPC3L-201ENST00000356128 ABL2P42684 1182 aa9.16□□□□□ -0.94
TRAPPC3L-201ENST00000356128 KCNA1Q09470 495 aa9.16□□□□□ -0.94
TRAPPC3L-201ENST00000356128 CCDC27Q2M243 656 aa9.16□□□□□ -0.94
TRAPPC3L-201ENST00000356128 FAM217BQ9NTX9 383 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC3L-201ENST00000356128 TBC1D2BQ9UPU7 963 aa9.16□□□□□ -0.94
TRAPPC3L-201ENST00000356128 MAP3K4Q9Y6R4 1608 aa9.16□□□□□ -0.94
TRAPPC3L-201ENST00000356128 TIE1P35590 1138 aa9.15□□□□□ -0.94
TRAPPC3L-201ENST00000356128 CLK2P49760 499 aaKnown RBP9.15□□□□□ -0.94
TRAPPC3L-201ENST00000356128 MYO5CQ9NQX4 1742 aa9.15□□□□□ -0.94
TRAPPC3L-201ENST00000356128 SPAG9O60271 1321 aaKnown RBP9.15□□□□□ -0.95
TRAPPC3L-201ENST00000356128 CDC42BPBQ9Y5S2 1711 aa9.14□□□□□ -0.95
TRAPPC3L-201ENST00000356128 SYCP2Q9BX26 1530 aa9.14□□□□□ -0.95
TRAPPC3L-201ENST00000356128 C2orf72A6NCS6 295 aa9.14□□□□□ -0.95
TRAPPC3L-201ENST00000356128 PTGER2P43116 358 aa9.14□□□□□ -0.95
TRAPPC3L-201ENST00000356128 SRPK2P78362 688 aaKnown RBP9.14□□□□□ -0.95
TRAPPC3L-201ENST00000356128 RSPH4AQ5TD94 716 aa9.14□□□□□ -0.95
TRAPPC3L-201ENST00000356128 PBXIP1Q96AQ6 731 aa9.14□□□□□ -0.95
TRAPPC3L-201ENST00000356128 LIMD1Q9UGP4 676 aa9.14□□□□□ -0.95
TRAPPC3L-201ENST00000356128 SCAPERQ9BY12 1400 aa9.14□□□□□ -0.95
TRAPPC3L-201ENST00000356128 MICALL2Q8IY33 904 aa9.14□□□□□ -0.95
TRAPPC3L-201ENST00000356128 PDCD7Q8N8D1 485 aaKnown RBP9.14□□□□□ -0.95
TRAPPC3L-201ENST00000356128 BANK1Q8NDB2 785 aa9.14□□□□□ -0.95
TRAPPC3L-201ENST00000356128 TMC2Q8TDI7 906 aa9.14□□□□□ -0.95
TRAPPC3L-201ENST00000356128 PREX2Q70Z35 1606 aa9.14□□□□□ -0.95
TRAPPC3L-201ENST00000356128 ANKRD30AQ9BXX3 1397 aa9.14□□□□□ -0.95
TRAPPC3L-201ENST00000356128 AMOTL2Q9Y2J4 779 aa9.13□□□□□ -0.95
TRAPPC3L-201ENST00000356128 C9orf84Q5VXU9 1444 aa9.13□□□□□ -0.95
TRAPPC3L-201ENST00000356128 KDM4FA0A1W2PPD8 638 aa9.13□□□□□ -0.95
TRAPPC3L-201ENST00000356128 CFAP70Q5T0N1 1121 aa9.13□□□□□ -0.95
TRAPPC3L-201ENST00000356128 ADGRL1O94910 1474 aa9.13□□□□□ -0.95
TRAPPC3L-201ENST00000356128 SAMD9LQ8IVG5 1584 aa9.13□□□□□ -0.95
TRAPPC3L-201ENST00000356128 AKNAQ7Z591 1439 aa9.12□□□□□ -0.95
TRAPPC3L-201ENST00000356128 TRAPPC8Q9Y2L5 1435 aa9.12□□□□□ -0.95
TRAPPC3L-201ENST00000356128 HSP90B1P14625 803 aaKnown RBP9.12□□□□□ -0.95
TRAPPC3L-201ENST00000356128 ATN1P54259 1190 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC3L-201ENST00000356128 ABCA9Q8IUA7 1624 aa9.11□□□□□ -0.95
TRAPPC3L-201ENST00000356128 GLI2P10070 1586 aa9.11□□□□□ -0.95
TRAPPC3L-201ENST00000356128 CCDC141Q6ZP82 1450 aa9.11□□□□□ -0.95
TRAPPC3L-201ENST00000356128 NAIPQ13075 1403 aa9.11□□□□□ -0.95
TRAPPC3L-201ENST00000356128 CDK11BP21127 795 aaKnown RBP9.11□□□□□ -0.95
TRAPPC3L-201ENST00000356128 NEUROD1Q13562 356 aa9.11□□□□□ -0.95
TRAPPC3L-201ENST00000356128 PLEKHH2Q8IVE3 1493 aa9.11□□□□□ -0.95
TRAPPC3L-201ENST00000356128 KIF15Q9NS87 1388 aa9.11□□□□□ -0.95
TRAPPC3L-201ENST00000356128 SND1Q7KZF4 910 aaKnown RBP eCLIP9.11□□□□□ -0.95
TRAPPC3L-201ENST00000356128 PUS7Q96PZ0 661 aaKnown RBP9.11□□□□□ -0.95
TRAPPC3L-201ENST00000356128 ARHGEF12Q9NZN5 1544 aa9.1□□□□□ -0.95
TRAPPC3L-201ENST00000356128 MBD5Q9P267 1494 aa9.1□□□□□ -0.95
TRAPPC3L-201ENST00000356128 HFM1A2PYH4 1435 aa9.1□□□□□ -0.95
TRAPPC3L-201ENST00000356128 KIF3CO14782 793 aa9.1□□□□□ -0.95
TRAPPC3L-201ENST00000356128 TBC1D2Q9BYX2 928 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms