RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 ABCC11Q96J66 1382 aa34.58■■■■□ 3.13
CLK2-201ENST00000355560 SRPK2P78362 688 aaKnown RBP34.58■■■■□ 3.13
CLK2-201ENST00000355560 BCANQ96GW7 911 aa34.56■■■■□ 3.12
CLK2-201ENST00000355560 ANKRD36BQ8N2N9 1353 aa34.54■■■■□ 3.12
CLK2-201ENST00000355560 USP32Q8NFA0 1604 aa34.54■■■■□ 3.12
CLK2-201ENST00000355560 ATAD2Q6PL18 1390 aa34.53■■■■□ 3.12
CLK2-201ENST00000355560 NINLQ9Y2I6 1382 aa34.53■■■■□ 3.12
CLK2-201ENST00000355560 KNDC1Q76NI1 1749 aa34.52■■■■□ 3.12
CLK2-201ENST00000355560 PLEKHH1Q9ULM0 1364 aa34.52■■■■□ 3.12
CLK2-201ENST00000355560 LTKP29376 864 aa34.51■■■■□ 3.12
CLK2-201ENST00000355560 WAPLQ7Z5K2 1190 aa34.51■■■■□ 3.12
CLK2-201ENST00000355560 SUPT16HQ9Y5B9 1047 aaKnown RBP34.51■■■■□ 3.12
CLK2-201ENST00000355560 PLEKHG1Q9ULL1 1385 aa34.51■■■■□ 3.11
CLK2-201ENST00000355560 RIMS1Q86UR5 1692 aaKnown RBP34.5■■■■□ 3.11
CLK2-201ENST00000355560 SLIT1O75093 1534 aa34.5■■■■□ 3.11
CLK2-201ENST00000355560 ADAMTS13Q76LX8 1427 aa34.5■■■■□ 3.11
CLK2-201ENST00000355560 TXNDC2Q86VQ3 553 aa34.48■■■■□ 3.11
CLK2-201ENST00000355560 ARHGAP23Q9P227 1491 aa34.47■■■■□ 3.11
CLK2-201ENST00000355560 TECPR2O15040 1411 aa34.47■■■■□ 3.11
CLK2-201ENST00000355560 SENP3-EIF4A1A0A087X0R7 540 aa34.47■■■■□ 3.11
CLK2-201ENST00000355560 CDK19Q9BWU1 502 aa34.46■■■■□ 3.11
CLK2-201ENST00000355560 EID1Q9Y6B2 187 aa34.46■■■■□ 3.11
CLK2-201ENST00000355560 INSRP06213 1382 aa34.45■■■■□ 3.11
CLK2-201ENST00000355560 CPS1P31327 1500 aa34.45■■■■□ 3.11
CLK2-201ENST00000355560 CGNL1Q0VF96 1302 aa34.45■■■■□ 3.1
CLK2-201ENST00000355560 A0A1W2PP64 1363 aa34.43■■■■□ 3.1
CLK2-201ENST00000355560 BLMP54132 1417 aaPredicted RBP34.43■■■■□ 3.1
CLK2-201ENST00000355560 FAM135BQ49AJ0 1406 aa34.42■■■■□ 3.1
CLK2-201ENST00000355560 NEFLP07196 543 aa34.42■■■■□ 3.1
CLK2-201ENST00000355560 THEMISQ8N1K5 641 aaPredicted RBP34.4■■■■□ 3.1
CLK2-201ENST00000355560 FKBP8Q14318 412 aa34.39■■■■□ 3.1
CLK2-201ENST00000355560 ADAMTSL3P82987 1691 aa34.39■■■■□ 3.1
CLK2-201ENST00000355560 MORC1Q86VD1 984 aa34.39■■■■□ 3.1
CLK2-201ENST00000355560 SIRT1Q96EB6 747 aa34.38■■■■□ 3.09
CLK2-201ENST00000355560 CEP170BQ9Y4F5 1589 aaPredicted RBP34.38■■■■□ 3.09
CLK2-201ENST00000355560 MED14O60244 1454 aa34.37■■■■□ 3.09
CLK2-201ENST00000355560 CD163L1Q9NR16 1453 aa34.37■■■■□ 3.09
CLK2-201ENST00000355560 WDR43Q15061 677 aaKnown RBP eCLIP34.36■■■■□ 3.09
CLK2-201ENST00000355560 NSD2O96028 1365 aa34.36■■■■□ 3.09
CLK2-201ENST00000355560 TERF2IPQ9NYB0 399 aa34.36■■■■□ 3.09
CLK2-201ENST00000355560 SMG6Q86US8 1419 aaKnown RBP34.35■■■■□ 3.09
CLK2-201ENST00000355560 ADAMTS8Q9UP79 889 aa34.35■■■■□ 3.09
CLK2-201ENST00000355560 SLC26A8Q96RN1 970 aa34.33■■■■□ 3.09
CLK2-201ENST00000355560 ROBO2Q9HCK4 1378 aa34.32■■■■□ 3.08
CLK2-201ENST00000355560 CABP1Q9NZU7 370 aa34.31■■■■□ 3.08
CLK2-201ENST00000355560 WASLO00401 505 aaPredicted RBP34.3■■■■□ 3.08
CLK2-201ENST00000355560 TNNT2P45379 298 aaPredicted RBP34.3■■■■□ 3.08
CLK2-201ENST00000355560 NUDCQ9Y266 331 aa34.29■■■■□ 3.08
CLK2-201ENST00000355560 HDGFL2Q7Z4V5 671 aaPredicted RBP34.28■■■■□ 3.08
CLK2-201ENST00000355560 SALL2Q9Y467 1007 aaPredicted RBP34.28■■■■□ 3.08
CLK2-201ENST00000355560 POLR3AO14802 1390 aaPredicted RBP34.27■■■■□ 3.08
CLK2-201ENST00000355560 ATP7BP35670 1465 aa34.26■■■■□ 3.08
CLK2-201ENST00000355560 PTPRUQ92729 1446 aa34.26■■■■□ 3.08
CLK2-201ENST00000355560 DIP2AQ14689 1571 aa34.26■■■■□ 3.07
CLK2-201ENST00000355560 ZNF142P52746 1687 aaPredicted RBP34.24■■■■□ 3.07
CLK2-201ENST00000355560 TBX22Q9Y458 520 aa34.24■■■■□ 3.07
CLK2-201ENST00000355560 ANKRD26Q9UPS8 1709 aa34.22■■■■□ 3.07
CLK2-201ENST00000355560 ADGRB2O60241 1585 aa34.21■■■■□ 3.07
CLK2-201ENST00000355560 PPIP5K1Q6PFW1 1433 aa34.2■■■■□ 3.07
CLK2-201ENST00000355560 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.2■■■■□ 3.07
CLK2-201ENST00000355560 GGNBP2Q9H3C7 697 aa34.19■■■■□ 3.06
CLK2-201ENST00000355560 KIF20BQ96Q89 1820 aa34.18■■■■□ 3.06
CLK2-201ENST00000355560 FYB1O15117 783 aa34.17■■■■□ 3.06
CLK2-201ENST00000355560 AMOTL2Q9Y2J4 779 aa34.17■■■■□ 3.06
CLK2-201ENST00000355560 PDE3BQ13370 1112 aa34.16■■■■□ 3.06
CLK2-201ENST00000355560 NUDT16Q96DE0 195 aaKnown RBP34.16■■■■□ 3.06
CLK2-201ENST00000355560 SHPRHQ149N8 1683 aa34.16■■■■□ 3.06
CLK2-201ENST00000355560 MTHFSP49914 203 aa34.15■■■■□ 3.06
CLK2-201ENST00000355560 SETD1BQ9UPS6 1966 aaKnown RBP34.15■■■■□ 3.06
CLK2-201ENST00000355560 PTCH1Q13635 1447 aa34.15■■■■□ 3.06
CLK2-201ENST00000355560 CCDC61Q9Y6R9 512 aa34.13■■■■□ 3.05
CLK2-201ENST00000355560 CPSF1Q10570 1443 aaKnown RBP34.13■■■■□ 3.05
CLK2-201ENST00000355560 CDC42BPGQ6DT37 1551 aa34.12■■■■□ 3.05
CLK2-201ENST00000355560 IRX6P78412 446 aaPredicted RBP34.11■■■■□ 3.05
CLK2-201ENST00000355560 XRN1Q8IZH2 1706 aaKnown RBP34.11■■■■□ 3.05
CLK2-201ENST00000355560 NCKAP5LQ9HCH0 1330 aa34.1■■■■□ 3.05
CLK2-201ENST00000355560 CCDC146Q8IYE0 955 aa34.1■■■■□ 3.05
CLK2-201ENST00000355560 PRR36Q9H6K5 1346 aa34.09■■■■□ 3.05
CLK2-201ENST00000355560 CFAP53Q96M91 514 aa34.09■■■■□ 3.05
CLK2-201ENST00000355560 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.07■■■■□ 3.05
CLK2-201ENST00000355560 EDC4Q6P2E9 1401 aaKnown RBP34.07■■■■□ 3.04
CLK2-201ENST00000355560 ANKLE2Q86XL3 938 aa34.07■■■■□ 3.04
CLK2-201ENST00000355560 ITSN1Q15811 1721 aa34.06■■■■□ 3.04
CLK2-201ENST00000355560 MON2Q7Z3U7 1717 aa34.06■■■■□ 3.04
CLK2-201ENST00000355560 CDCA7LQ96GN5 454 aa34.05■■■■□ 3.04
CLK2-201ENST00000355560 PIK3R4Q99570 1358 aa34.04■■■■□ 3.04
CLK2-201ENST00000355560 TOPAZ1Q8N9V7 1692 aa34.04■■■■□ 3.04
CLK2-201ENST00000355560 AKAP12Q02952 1782 aa34.04■■■■□ 3.04
CLK2-201ENST00000355560 APAF1O14727 1248 aa34■■■■□ 3.03
CLK2-201ENST00000355560 NUTM2FA1L443 756 aa33.98■■■■□ 3.03
CLK2-201ENST00000355560 KCNA6P17658 529 aa33.98■■■■□ 3.03
CLK2-201ENST00000355560 ZNF521Q96K83 1311 aa33.98■■■■□ 3.03
CLK2-201ENST00000355560 RNF123Q5XPI4 1314 aa33.97■■■■□ 3.03
CLK2-201ENST00000355560 ZNF692Q9BU19 519 aaPredicted RBP33.95■■■■□ 3.03
CLK2-201ENST00000355560 ERICH6BQ5W0A0 696 aa33.94■■■■□ 3.02
CLK2-201ENST00000355560 COL3A1P02461 1466 aaPredicted RBP33.94■■■■□ 3.02
CLK2-201ENST00000355560 NKTRP30414 1462 aaKnown RBP33.93■■■■□ 3.02
CLK2-201ENST00000355560 NME9Q86XW9 330 aa33.93■■■■□ 3.02
CLK2-201ENST00000355560 CHD2O14647 1828 aaKnown RBP33.92■■■■□ 3.02
CLK2-201ENST00000355560 PLEKHG3A1L390 1219 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms