RNA–Protein interactions for RNA: ENST00000355445.7

TMEM116-201, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-201ENST00000355445 TRIM52Q96A61 297 aa12.04□□□□□ -0.48
TMEM116-201ENST00000355445 SETD5Q9C0A6 1442 aa12.04□□□□□ -0.48
TMEM116-201ENST00000355445 ADGRL3Q9HAR2 1447 aa12.04□□□□□ -0.48
TMEM116-201ENST00000355445 NUTM2BA6NNL0 878 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-201ENST00000355445 NUTM2EB1AL46 878 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-201ENST00000355445 ZNF326Q5BKZ1 582 aaKnown RBP12.03□□□□□ -0.48
TMEM116-201ENST00000355445 NUTM2AQ8IVF1 878 aaPredicted RBP12.03□□□□□ -0.48
TMEM116-201ENST00000355445 CDK12Q9NYV4 1490 aaPredicted RBP12.02□□□□□ -0.49
TMEM116-201ENST00000355445 UPF1Q92900 1129 aaKnown RBP eCLIP12.02□□□□□ -0.49
TMEM116-201ENST00000355445 PPARGC1BQ86YN6 1023 aaKnown RBP12.01□□□□□ -0.49
TMEM116-201ENST00000355445 AFF2P51816 1311 aa12□□□□□ -0.49
TMEM116-201ENST00000355445 KIF1BO60333 1816 aa12□□□□□ -0.49
TMEM116-201ENST00000355445 DDX17Q92841 729 aaKnown RBP12□□□□□ -0.49
TMEM116-201ENST00000355445 LAMC1P11047 1609 aa12□□□□□ -0.49
TMEM116-201ENST00000355445 PNPLA6Q8IY17 1366 aa12□□□□□ -0.49
TMEM116-201ENST00000355445 RXRBP28702 533 aa11.99□□□□□ -0.49
TMEM116-201ENST00000355445 ZNF692Q9BU19 519 aaPredicted RBP11.99□□□□□ -0.49
TMEM116-201ENST00000355445 RGS12O14924 1447 aa11.98□□□□□ -0.49
TMEM116-201ENST00000355445 PTCH1Q13635 1447 aa11.98□□□□□ -0.49
TMEM116-201ENST00000355445 C1orf167Q5SNV9 1468 aa11.98□□□□□ -0.49
TMEM116-201ENST00000355445 NAIPQ13075 1403 aa11.98□□□□□ -0.49
TMEM116-201ENST00000355445 LRRC59Q96AG4 307 aaKnown RBP11.97□□□□□ -0.49
TMEM116-201ENST00000355445 C8orf37Q96NL8 207 aa11.96□□□□□ -0.49
TMEM116-201ENST00000355445 PRAG1Q86YV5 1406 aa11.96□□□□□ -0.49
TMEM116-201ENST00000355445 ROBO2Q9HCK4 1378 aa11.96□□□□□ -0.5
TMEM116-201ENST00000355445 RRBP1Q9P2E9 1410 aaKnown RBP11.95□□□□□ -0.5
TMEM116-201ENST00000355445 PPLO60437 1756 aa11.95□□□□□ -0.5
TMEM116-201ENST00000355445 COL22A1Q8NFW1 1626 aaPredicted RBP11.93□□□□□ -0.5
TMEM116-201ENST00000355445 CDC42BPGQ6DT37 1551 aa11.92□□□□□ -0.5
TMEM116-201ENST00000355445 ADAMTS2O95450 1211 aa11.92□□□□□ -0.5
TMEM116-201ENST00000355445 RBM6P78332 1123 aaKnown RBP11.92□□□□□ -0.5
TMEM116-201ENST00000355445 ORAI2Q96SN7 254 aa11.92□□□□□ -0.5
TMEM116-201ENST00000355445 QTRT2Q9H974 415 aaKnown RBP11.92□□□□□ -0.5
TMEM116-201ENST00000355445 SOS2Q07890 1332 aaPredicted RBP11.92□□□□□ -0.5
TMEM116-201ENST00000355445 HFM1A2PYH4 1435 aa11.9□□□□□ -0.5
TMEM116-201ENST00000355445 VGFO15240 615 aaPredicted RBP11.9□□□□□ -0.5
TMEM116-201ENST00000355445 NGLY1Q96IV0 654 aa11.89□□□□□ -0.51
TMEM116-201ENST00000355445 MYOM2P54296 1465 aa11.89□□□□□ -0.51
TMEM116-201ENST00000355445 PXDNQ92626 1479 aa11.89□□□□□ -0.51
TMEM116-201ENST00000355445 SSUH2Q9Y2M2 353 aa11.88□□□□□ -0.51
TMEM116-201ENST00000355445 RPGRIP1LQ68CZ1 1315 aa11.88□□□□□ -0.51
TMEM116-201ENST00000355445 IFT172Q9UG01 1749 aa11.88□□□□□ -0.51
TMEM116-201ENST00000355445 MARF1Q9Y4F3 1742 aaKnown RBP11.88□□□□□ -0.51
TMEM116-201ENST00000355445 REM2Q8IYK8 340 aaPredicted RBP11.87□□□□□ -0.51
TMEM116-201ENST00000355445 ATRNO75882 1429 aa11.86□□□□□ -0.51
TMEM116-201ENST00000355445 ATAD2Q6PL18 1390 aa11.86□□□□□ -0.51
TMEM116-201ENST00000355445 USP21Q9UK80 565 aa11.86□□□□□ -0.51
TMEM116-201ENST00000355445 KNDC1Q76NI1 1749 aa11.86□□□□□ -0.51
TMEM116-201ENST00000355445 TECPR2O15040 1411 aa11.86□□□□□ -0.51
TMEM116-201ENST00000355445 FNBP4Q8N3X1 1017 aaPredicted RBP11.85□□□□□ -0.51
TMEM116-201ENST00000355445 TRPC5Q9UL62 973 aaPredicted RBP11.85□□□□□ -0.51
TMEM116-201ENST00000355445 EP400Q96L91 3159 aa11.85□□□□□ -0.51
TMEM116-201ENST00000355445 BCL9LQ86UU0 1499 aa11.84□□□□□ -0.51
TMEM116-201ENST00000355445 SPATA31E1Q6ZUB1 1445 aa11.84□□□□□ -0.51
TMEM116-201ENST00000355445 NPHP3Q7Z494 1330 aa11.84□□□□□ -0.51
TMEM116-201ENST00000355445 ADGRF5Q8IZF2 1346 aa11.84□□□□□ -0.51
TMEM116-201ENST00000355445 FMN2Q9NZ56 1722 aa11.84□□□□□ -0.51
TMEM116-201ENST00000355445 SPDYE4A6NLX3 237 aa11.84□□□□□ -0.51
TMEM116-201ENST00000355445 ESCO1Q5FWF5 840 aa11.84□□□□□ -0.51
TMEM116-201ENST00000355445 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.83□□□□□ -0.52
TMEM116-201ENST00000355445 XPCQ01831 940 aaPredicted RBP11.83□□□□□ -0.52
TMEM116-201ENST00000355445 SRCAPQ6ZRS2 3230 aa11.83□□□□□ -0.52
TMEM116-201ENST00000355445 CCDC144AA2RUR9 1427 aa11.82□□□□□ -0.52
TMEM116-201ENST00000355445 KIF1AQ12756 1690 aa11.82□□□□□ -0.52
TMEM116-201ENST00000355445 PLEKHH1Q9ULM0 1364 aa11.82□□□□□ -0.52
TMEM116-201ENST00000355445 LRPPRCP42704 1394 aaKnown RBP11.81□□□□□ -0.52
TMEM116-201ENST00000355445 FOXO3O43524 673 aa11.81□□□□□ -0.52
TMEM116-201ENST00000355445 STK26Q9P289 416 aa11.81□□□□□ -0.52
TMEM116-201ENST00000355445 PIK3C2GO75747 1445 aa11.81□□□□□ -0.52
TMEM116-201ENST00000355445 GLI3P10071 1580 aa11.81□□□□□ -0.52
TMEM116-201ENST00000355445 NUTM2FA1L443 756 aa11.8□□□□□ -0.52
TMEM116-201ENST00000355445 WAPLQ7Z5K2 1190 aa11.8□□□□□ -0.52
TMEM116-201ENST00000355445 USP32Q8NFA0 1604 aa11.8□□□□□ -0.52
TMEM116-201ENST00000355445 CHRDL2Q6WN34 429 aa11.79□□□□□ -0.52
TMEM116-201ENST00000355445 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
TMEM116-201ENST00000355445 ABCC11Q96J66 1382 aa11.79□□□□□ -0.52
TMEM116-201ENST00000355445 ANKRD30BQ9BXX2 1392 aa11.79□□□□□ -0.52
TMEM116-201ENST00000355445 RGL3Q3MIN7 710 aa11.78□□□□□ -0.52
TMEM116-201ENST00000355445 TMEM132EQ6IEE7 984 aa11.78□□□□□ -0.52
TMEM116-201ENST00000355445 SLIT2O94813 1529 aa11.78□□□□□ -0.52
TMEM116-201ENST00000355445 RALGAPBQ86X10 1494 aa11.78□□□□□ -0.52
TMEM116-201ENST00000355445 ABCA3Q99758 1704 aa11.78□□□□□ -0.52
TMEM116-201ENST00000355445 YTHDC2Q9H6S0 1430 aaKnown RBP11.78□□□□□ -0.52
TMEM116-201ENST00000355445 SPATA31A3Q5VYP0 1347 aa11.77□□□□□ -0.53
TMEM116-201ENST00000355445 PLCH1Q4KWH8 1693 aa11.77□□□□□ -0.53
TMEM116-201ENST00000355445 RGPD8O14715 1765 aaPredicted RBP11.77□□□□□ -0.53
TMEM116-201ENST00000355445 GJD4Q96KN9 370 aaPredicted RBP11.77□□□□□ -0.53
TMEM116-201ENST00000355445 TNS3Q68CZ2 1445 aa11.75□□□□□ -0.53
TMEM116-201ENST00000355445 BRWD3Q6RI45 1802 aa11.75□□□□□ -0.53
TMEM116-201ENST00000355445 NRXN1Q9ULB1 1477 aa11.75□□□□□ -0.53
TMEM116-201ENST00000355445 MPHOSPH9Q99550 1183 aa11.75□□□□□ -0.53
TMEM116-201ENST00000355445 UNC5CLQ8IV45 518 aa11.74□□□□□ -0.53
TMEM116-201ENST00000355445 ZRANB1Q9UGI0 708 aa11.74□□□□□ -0.53
TMEM116-201ENST00000355445 NWD2Q9ULI1 1742 aa11.73□□□□□ -0.53
TMEM116-201ENST00000355445 PITPNM1O00562 1244 aa11.73□□□□□ -0.53
TMEM116-201ENST00000355445 CLEC11AQ9Y240 323 aa11.73□□□□□ -0.53
TMEM116-201ENST00000355445 BLMP54132 1417 aaPredicted RBP11.73□□□□□ -0.53
TMEM116-201ENST00000355445 KRT28Q7Z3Y7 464 aa11.72□□□□□ -0.53
TMEM116-201ENST00000355445 CCDC125Q86Z20 511 aa11.72□□□□□ -0.53
TMEM116-201ENST00000355445 ADGRB2O60241 1585 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms