RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 THOC2Q8NI27 1593 aaKnown RBP15.24■□□□□ 0.03
COLCA1-201ENST00000355430 RIPK4P57078 832 aa15.24■□□□□ 0.03
COLCA1-201ENST00000355430 NOL8Q76FK4 1167 aaKnown RBP15.24■□□□□ 0.03
COLCA1-201ENST00000355430 TCP11L2Q8N4U5 519 aa15.24■□□□□ 0.03
COLCA1-201ENST00000355430 SLC4A10Q6U841 1118 aa15.23■□□□□ 0.03
COLCA1-201ENST00000355430 FOXD4L5Q5VV16 416 aaPredicted RBP15.23■□□□□ 0.03
COLCA1-201ENST00000355430 FOXD4L4Q8WXT5 416 aaPredicted RBP15.23■□□□□ 0.03
COLCA1-201ENST00000355430 CTTNBP2Q8WZ74 1663 aa15.23■□□□□ 0.03
COLCA1-201ENST00000355430 PDZRN3Q9UPQ7 1066 aa15.23■□□□□ 0.03
COLCA1-201ENST00000355430 CCDC141Q6ZP82 1450 aa15.23■□□□□ 0.03
COLCA1-201ENST00000355430 NUTM2GQ5VZR2 741 aa15.23■□□□□ 0.03
COLCA1-201ENST00000355430 DIAPH1O60610 1272 aaKnown RBP15.22■□□□□ 0.03
COLCA1-201ENST00000355430 MTHFSP49914 203 aa15.22■□□□□ 0.03
COLCA1-201ENST00000355430 PDE3AQ14432 1141 aa15.22■□□□□ 0.03
COLCA1-201ENST00000355430 ZRSR1Q15695 479 aaKnown RBP15.22■□□□□ 0.03
COLCA1-201ENST00000355430 ARID3AQ99856 593 aa15.22■□□□□ 0.03
COLCA1-201ENST00000355430 DDX49Q9Y6V7 483 aaKnown RBP15.22■□□□□ 0.03
COLCA1-201ENST00000355430 TRIM6-TRIM34B2RNG4 842 aa15.21■□□□□ 0.03
COLCA1-201ENST00000355430 HMGB2P26583 209 aaKnown RBP15.21■□□□□ 0.03
COLCA1-201ENST00000355430 ANO8Q9HCE9 1232 aaPredicted RBP15.21■□□□□ 0.03
COLCA1-201ENST00000355430 LNPKQ9C0E8 428 aa15.21■□□□□ 0.03
COLCA1-201ENST00000355430 STRN4Q9NRL3 753 aa15.21■□□□□ 0.03
COLCA1-201ENST00000355430 FANCAO15360 1455 aa15.21■□□□□ 0.03
COLCA1-201ENST00000355430 PRAM1Q96QH2 718 aa15.21■□□□□ 0.02
COLCA1-201ENST00000355430 ST18O60284 1047 aa15.2■□□□□ 0.02
COLCA1-201ENST00000355430 HMMRO75330 724 aa15.2■□□□□ 0.02
COLCA1-201ENST00000355430 AAMPQ13685 434 aa15.2■□□□□ 0.02
COLCA1-201ENST00000355430 CABP2Q9NPB3 220 aa15.2■□□□□ 0.02
COLCA1-201ENST00000355430 NAP1L2Q9ULW6 460 aaPredicted RBP15.2■□□□□ 0.02
COLCA1-201ENST00000355430 SKOR2Q2VWA4 1001 aaPredicted RBP15.2■□□□□ 0.02
COLCA1-201ENST00000355430 GOLGA6L4A6NEF3 574 aa15.2■□□□□ 0.02
COLCA1-201ENST00000355430 SLFN5Q08AF3 891 aa15.19■□□□□ 0.02
COLCA1-201ENST00000355430 GPATCH3Q96I76 525 aa15.19■□□□□ 0.02
COLCA1-201ENST00000355430 KIAA1211Q6ZU35 1233 aa15.19■□□□□ 0.02
COLCA1-201ENST00000355430 ASXL2Q76L83 1435 aa15.18■□□□□ 0.02
COLCA1-201ENST00000355430 GGNBP2Q9H3C7 697 aa15.18■□□□□ 0.02
COLCA1-201ENST00000355430 NEXNQ0ZGT2 675 aa15.18■□□□□ 0.02
COLCA1-201ENST00000355430 SYAP1Q96A49 352 aaPredicted RBP15.18■□□□□ 0.02
COLCA1-201ENST00000355430 ZNF692Q9BU19 519 aaPredicted RBP15.17■□□□□ 0.02
COLCA1-201ENST00000355430 CHAF1AQ13111 956 aaPredicted RBP15.17■□□□□ 0.02
COLCA1-201ENST00000355430 TAOK2Q9UL54 1235 aa15.16■□□□□ 0.02
COLCA1-201ENST00000355430 KIF16BQ96L93 1317 aa15.16■□□□□ 0.02
COLCA1-201ENST00000355430 HSP90AA2PQ14568 343 aaPredicted RBP15.16■□□□□ 0.02
COLCA1-201ENST00000355430 PRDM11Q9NQV5 511 aa15.16■□□□□ 0.02
COLCA1-201ENST00000355430 DRC7Q8IY82 874 aa15.16■□□□□ 0.02
COLCA1-201ENST00000355430 CEBPAP49715 358 aaPredicted RBP15.15■□□□□ 0.02
COLCA1-201ENST00000355430 KIAA2012Q0VF49 1180 aa15.15■□□□□ 0.02
COLCA1-201ENST00000355430 EXOSC9Q06265 439 aaKnown RBP15.15■□□□□ 0.02
COLCA1-201ENST00000355430 TOM1L2Q6ZVM7 507 aa15.14■□□□□ 0.02
COLCA1-201ENST00000355430 TSR2Q969E8 191 aaKnown RBP15.14■□□□□ 0.02
COLCA1-201ENST00000355430 SLC12A5Q9H2X9 1139 aa15.14■□□□□ 0.02
COLCA1-201ENST00000355430 TCOF1Q13428 1488 aaKnown RBP15.14■□□□□ 0.01
COLCA1-201ENST00000355430 TULP1O00294 542 aaPredicted RBP15.14■□□□□ 0.01
COLCA1-201ENST00000355430 DDX58O95786 925 aaKnown RBP15.14■□□□□ 0.01
COLCA1-201ENST00000355430 RTEL1-TNFRSF6BF6WH68 1400 aa15.13■□□□□ 0.01
COLCA1-201ENST00000355430 NINLQ9Y2I6 1382 aa15.13■□□□□ 0.01
COLCA1-201ENST00000355430 TRAK2O60296 914 aa15.13■□□□□ 0.01
COLCA1-201ENST00000355430 DISP3Q9P2K9 1392 aa15.13■□□□□ 0.01
COLCA1-201ENST00000355430 HMOX1P09601 288 aa15.13■□□□□ 0.01
COLCA1-201ENST00000355430 TATP17735 454 aaPredicted RBP15.13■□□□□ 0.01
COLCA1-201ENST00000355430 TOM1O60784 492 aa15.12■□□□□ 0.01
COLCA1-201ENST00000355430 FOXD4L6Q3SYB3 417 aaPredicted RBP15.11■□□□□ 0.01
COLCA1-201ENST00000355430 FOXD4L3Q6VB84 417 aaPredicted RBP15.11■□□□□ 0.01
COLCA1-201ENST00000355430 RILPL2Q969X0 211 aa15.11■□□□□ 0.01
COLCA1-201ENST00000355430 CDK19Q9BWU1 502 aa15.11■□□□□ 0.01
COLCA1-201ENST00000355430 PLEKHO1Q53GL0 409 aaPredicted RBP15.11■□□□□ 0.01
COLCA1-201ENST00000355430 RALGAPBQ86X10 1494 aa15.11■□□□□ 0.01
COLCA1-201ENST00000355430 EIF2S2P20042 333 aaKnown RBP15.11■□□□□ 0.01
COLCA1-201ENST00000355430 WWC1Q8IX03 1113 aa15.1■□□□□ 0.01
COLCA1-201ENST00000355430 API5Q9BZZ5 524 aaKnown RBP15.1■□□□□ 0.01
COLCA1-201ENST00000355430 NOB1Q9ULX3 412 aaKnown RBP15.1■□□□□ 0.01
COLCA1-201ENST00000355430 WDR62O43379 1518 aa15.1■□□□□ 0.01
COLCA1-201ENST00000355430 GOLGA6L6A8MZA4 724 aa15.1■□□□□ 0.01
COLCA1-201ENST00000355430 DUSP27Q5VZP5 1158 aa15.1■□□□□ 0.01
COLCA1-201ENST00000355430 MRE11P49959 708 aa15.1■□□□□ 0.01
COLCA1-201ENST00000355430 WDR7Q9Y4E6 1490 aa15.1■□□□□ 0.01
COLCA1-201ENST00000355430 WDR63Q8IWG1 891 aa15.09■□□□□ 0.01
COLCA1-201ENST00000355430 FAM43AQ8N2R8 423 aa15.09■□□□□ 0.01
COLCA1-201ENST00000355430 MVPQ14764 893 aaKnown RBP15.09■□□□□ 0.01
COLCA1-201ENST00000355430 GPATCH8Q9UKJ3 1502 aaKnown RBP15.08■□□□□ 0.01
COLCA1-201ENST00000355430 MCTP1Q6DN14 999 aa15.08■□□□□ 0.01
COLCA1-201ENST00000355430 NKTRP30414 1462 aaKnown RBP15.08■□□□□ 0
COLCA1-201ENST00000355430 NOL10Q9BSC4 688 aaKnown RBP15.08■□□□□ 0
COLCA1-201ENST00000355430 C1orf115Q9H7X2 142 aa15.08■□□□□ 0
COLCA1-201ENST00000355430 LRPPRCP42704 1394 aaKnown RBP15.08■□□□□ 0
COLCA1-201ENST00000355430 DHX29Q7Z478 1369 aaKnown RBP15.08■□□□□ 0
COLCA1-201ENST00000355430 TNRQ92752 1358 aa15.08■□□□□ 0
COLCA1-201ENST00000355430 GNAI1P63096 354 aa15.08■□□□□ 0
COLCA1-201ENST00000355430 UBAP1LF5GYI3 381 aa15.07■□□□□ 0
COLCA1-201ENST00000355430 KIF21AQ7Z4S6 1674 aa15.07■□□□□ 0
COLCA1-201ENST00000355430 CDC45O75419 566 aa15.07■□□□□ 0
COLCA1-201ENST00000355430 REC8O95072 547 aa15.06■□□□□ 0
COLCA1-201ENST00000355430 HSP90B1P14625 803 aaKnown RBP15.06■□□□□ 0
COLCA1-201ENST00000355430 RAPGEF6Q8TEU7 1601 aa15.06■□□□□ 0
COLCA1-201ENST00000355430 PHF14O94880 888 aa15.06■□□□□ 0
COLCA1-201ENST00000355430 INTS3Q68E01 1043 aaKnown RBP15.06■□□□□ 0
COLCA1-201ENST00000355430 RBM33Q96EV2 1170 aaKnown RBP15.06■□□□□ 0
COLCA1-201ENST00000355430 GAS2L2Q8NHY3 880 aa15.05■□□□□ 0
COLCA1-201ENST00000355430 NSD3Q9BZ95 1437 aa15.05■□□□□ 0
COLCA1-201ENST00000355430 SPG7Q9UQ90 795 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms